RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 AGPAT5Q9NUQ2 364 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 SENP1Q9P0U3 644 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 PITPNM2Q9BZ72 1349 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 RPS6KA5O75582 802 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 GSTA1P08263 222 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 KIAA1755Q5JYT7 1200 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 BSPRYQ5W0U4 402 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 MAP7D3Q8IWC1 876 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 MSL3Q8N5Y2 521 aaKnown RBP16.98■□□□□ 0.31
SMC4-204ENST00000462787 RFFLQ8WZ73 363 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 BRIP1Q9BX63 1249 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 TEKT3Q9BXF9 490 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 LCMT1Q9UIC8 334 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 SETBP1Q9Y6X0 1596 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 ITIH4Q14624 930 aa16.97■□□□□ 0.31
SMC4-204ENST00000462787 ANKRD40Q6AI12 368 aa16.97■□□□□ 0.31
SMC4-204ENST00000462787 ANO5Q75V66 913 aa16.97■□□□□ 0.31
SMC4-204ENST00000462787 WDR75Q8IWA0 830 aaKnown RBP16.97■□□□□ 0.31
SMC4-204ENST00000462787 RAD51CO43502 376 aa16.97■□□□□ 0.31
SMC4-204ENST00000462787 MX2P20592 715 aa16.97■□□□□ 0.31
SMC4-204ENST00000462787 SCTRP47872 440 aa16.97■□□□□ 0.31
SMC4-204ENST00000462787 PPP2R5DQ14738 602 aa16.97■□□□□ 0.31
SMC4-204ENST00000462787 LLGL1Q15334 1064 aa16.97■□□□□ 0.31
SMC4-204ENST00000462787 TRMT10CQ7L0Y3 403 aaKnown RBP16.97■□□□□ 0.31
SMC4-204ENST00000462787 LRRC47Q8N1G4 583 aaKnown RBP16.97■□□□□ 0.31
SMC4-204ENST00000462787 TAB3Q8N5C8 712 aaPredicted RBP16.97■□□□□ 0.31
SMC4-204ENST00000462787 RAD54LQ92698 747 aa16.97■□□□□ 0.31
SMC4-204ENST00000462787 PPWD1Q96BP3 646 aaKnown RBP16.97■□□□□ 0.31
SMC4-204ENST00000462787 ACCSQ96QU6 501 aa16.97■□□□□ 0.31
SMC4-204ENST00000462787 PCDHA1Q9Y5I3 950 aa16.97■□□□□ 0.31
SMC4-204ENST00000462787 CROCC2H7BZ55 1655 aa16.97■□□□□ 0.31
SMC4-204ENST00000462787 CRB1P82279 1406 aa16.97■□□□□ 0.31
SMC4-204ENST00000462787 NVLO15381 856 aaKnown RBP16.97■□□□□ 0.31
SMC4-204ENST00000462787 AARSP49588 968 aaKnown RBP eCLIP16.97■□□□□ 0.313e-49■■■■■ 252.4
SMC4-204ENST00000462787 DYNLL1P63167 89 aaKnown RBP16.97■□□□□ 0.31
SMC4-204ENST00000462787 FAM102BQ5T8I3 360 aa16.97■□□□□ 0.31
SMC4-204ENST00000462787 CCDC137Q6PK04 289 aaKnown RBP16.97■□□□□ 0.31
SMC4-204ENST00000462787 RTCBQ9Y3I0 505 aaKnown RBP16.97■□□□□ 0.31
SMC4-204ENST00000462787 PRR36Q9H6K5 1346 aa16.97■□□□□ 0.31
SMC4-204ENST00000462787 DLATP10515 647 aaKnown RBP16.97■□□□□ 0.31
SMC4-204ENST00000462787 NCAPHQ15003 741 aa16.97■□□□□ 0.31
SMC4-204ENST00000462787 FBXO11Q86XK2 927 aa16.97■□□□□ 0.31
SMC4-204ENST00000462787 RBM17Q96I25 401 aaKnown RBP16.97■□□□□ 0.31
SMC4-204ENST00000462787 FAM161BQ96MY7 647 aa16.97■□□□□ 0.31
SMC4-204ENST00000462787 PIGSQ96S52 555 aa16.97■□□□□ 0.31
SMC4-204ENST00000462787 PFASO15067 1338 aa16.97■□□□□ 0.31
SMC4-204ENST00000462787 PDS5AQ29RF7 1337 aaKnown RBP16.97■□□□□ 0.31
SMC4-204ENST00000462787 GPC4O75487 556 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 TOM1L1O75674 476 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 STAT4Q14765 748 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 KLHL38Q2WGJ6 581 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 KDM4CQ9H3R0 1056 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 ADAMTS2O95450 1211 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 ERVK-24P63145 666 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 RFX6Q8HWS3 928 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 PDZD8Q8NEN9 1154 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 SDCCAG3Q96C92 435 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 XAB2Q9HCS7 855 aaKnown RBP16.96■□□□□ 0.31
SMC4-204ENST00000462787 POLD4Q9HCU8 107 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 MCF2LO15068 1137 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 KRT37O76014 449 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 CPP00450 1065 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 BBS9Q3SYG4 887 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 ARL8AQ96BM9 186 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 SNF8Q96H20 258 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 WNT8AQ9H1J5 351 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 RHOBTB3O94955 611 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 MXI1P50539 228 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 OR2W6PQ8NHA6 318 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 ROPN1BQ9BZX4 212 aaPredicted RBP16.96■□□□□ 0.31
SMC4-204ENST00000462787 CCSER1Q9C0I3 900 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 ROPN1Q9HAT0 212 aaPredicted RBP16.96■□□□□ 0.31
SMC4-204ENST00000462787 PFDN4Q9NQP4 134 aa16.96■□□□□ 0.31
SMC4-204ENST00000462787 IGF2BP3O00425 579 aaKnown RBP eCLIP16.95■□□□□ 0.3
SMC4-204ENST00000462787 LIG4P49917 911 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 ARL4CP56559 192 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 TMPRSS15P98073 1019 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 ZNF211Q13398 564 aaPredicted RBP16.95■□□□□ 0.3
SMC4-204ENST00000462787 USP38Q8NB14 1042 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 TTC17Q96AE7 1141 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 HAUS8Q9BT25 410 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 P4HA1P13674 534 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 DPP8Q6V1X1 898 aaPredicted RBP16.95■□□□□ 0.3
SMC4-204ENST00000462787 LONP2Q86WA8 852 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 CAVIN3Q969G5 261 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 ORAI2Q96SN7 254 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 PARVGQ9HBI0 331 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 HPSEQ9Y251 543 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 COPEO14579 308 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 RIMBP2O15034 1052 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 TTI1O43156 1089 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 KCNA3P22001 575 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 COPS2P61201 443 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 COASYQ13057 564 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 RASGRF1Q13972 1273 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 GRAMD4Q6IC98 578 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 NRBF2Q96F24 287 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 SCYL1Q96KG9 808 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 TRIM56Q9BRZ2 755 aaKnown RBP16.95■□□□□ 0.3
SMC4-204ENST00000462787 DCTN4Q9UJW0 460 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms