RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 TMEM62Q0P6H9 643 aa21.18■□□□□ 0.98
COL9A3-203ENST00000462700 LPIN1Q14693 890 aa21.18■□□□□ 0.98
COL9A3-203ENST00000462700 XKR3Q5GH77 459 aa21.18■□□□□ 0.98
COL9A3-203ENST00000462700 FBXO47Q5MNV8 452 aa21.18■□□□□ 0.98
COL9A3-203ENST00000462700 NCAPH2Q6IBW4 605 aa21.18■□□□□ 0.98
COL9A3-203ENST00000462700 HERC6Q8IVU3 1022 aa21.18■□□□□ 0.98
COL9A3-203ENST00000462700 KIAA0319LQ8IZA0 1049 aa21.18■□□□□ 0.98
COL9A3-203ENST00000462700 APBB2Q92870 758 aa21.18■□□□□ 0.98
COL9A3-203ENST00000462700 GUCD1Q96NT3 240 aa21.18■□□□□ 0.98
COL9A3-203ENST00000462700 NKX2-4Q9H2Z4 354 aa21.18■□□□□ 0.98
COL9A3-203ENST00000462700 PCDHA11Q9Y5I1 949 aa21.18■□□□□ 0.98
COL9A3-203ENST00000462700 KAT6AQ92794 2004 aa21.17■□□□□ 0.98
COL9A3-203ENST00000462700 MAGEB2O15479 319 aa21.17■□□□□ 0.98
COL9A3-203ENST00000462700 STBD1O95210 358 aa21.17■□□□□ 0.98
COL9A3-203ENST00000462700 U2AF2P26368 475 aaKnown RBP eCLIP21.17■□□□□ 0.984e-7■■■□□ 15.2
COL9A3-203ENST00000462700 MCM7P33993 719 aa21.17■□□□□ 0.98
COL9A3-203ENST00000462700 EPHA7Q15375 998 aa21.17■□□□□ 0.98
COL9A3-203ENST00000462700 MTMR9Q96QG7 549 aa21.17■□□□□ 0.98
COL9A3-203ENST00000462700 CELF4Q9BZC1 486 aaKnown RBP21.17■□□□□ 0.98
COL9A3-203ENST00000462700 SEPT9Q9UHD8 586 aaPredicted RBP21.17■□□□□ 0.98
COL9A3-203ENST00000462700 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.17■□□□□ 0.98
COL9A3-203ENST00000462700 SIP14410 1827 aa21.17■□□□□ 0.98
COL9A3-203ENST00000462700 KDM3AQ9Y4C1 1321 aa21.16■□□□□ 0.98
COL9A3-203ENST00000462700 P4HBP07237 508 aaKnown RBP21.16■□□□□ 0.98
COL9A3-203ENST00000462700 MYOGP15173 224 aa21.16■□□□□ 0.98
COL9A3-203ENST00000462700 QARSP47897 775 aaKnown RBP21.16■□□□□ 0.98
COL9A3-203ENST00000462700 TARBP2Q15633 366 aaKnown RBP21.16■□□□□ 0.98
COL9A3-203ENST00000462700 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.16■□□□□ 0.98
COL9A3-203ENST00000462700 TSHZ1Q6ZSZ6 1077 aa21.16■□□□□ 0.98
COL9A3-203ENST00000462700 METTL13Q8N6R0 699 aa21.16■□□□□ 0.98
COL9A3-203ENST00000462700 NIFKQ9BYG3 293 aaKnown RBP21.16■□□□□ 0.98
COL9A3-203ENST00000462700 TMEM60Q9H2L4 133 aa21.16■□□□□ 0.98
COL9A3-203ENST00000462700 ZNF576Q9H609 170 aa21.16■□□□□ 0.98
COL9A3-203ENST00000462700 TTC12Q9H892 705 aaPredicted RBP21.16■□□□□ 0.98
COL9A3-203ENST00000462700 PCDHA12Q9UN75 941 aa21.16■□□□□ 0.98
COL9A3-203ENST00000462700 SMC3Q9UQE7 1217 aa21.16■□□□□ 0.98
COL9A3-203ENST00000462700 SQORQ9Y6N5 450 aa21.16■□□□□ 0.98
COL9A3-203ENST00000462700 TMEM150BA6NC51 233 aa21.15■□□□□ 0.98
COL9A3-203ENST00000462700 DKC1O60832 514 aaKnown RBP eCLIP21.15■□□□□ 0.98
COL9A3-203ENST00000462700 TXKP42681 527 aa21.15■□□□□ 0.98
COL9A3-203ENST00000462700 TRAPPC10P48553 1259 aa21.15■□□□□ 0.98
COL9A3-203ENST00000462700 CLCN3P51790 818 aa21.15■□□□□ 0.98
COL9A3-203ENST00000462700 ORC2Q13416 577 aaPredicted RBP21.15■□□□□ 0.98
COL9A3-203ENST00000462700 CUL4AQ13619 759 aa21.15■□□□□ 0.98
COL9A3-203ENST00000462700 TTC38Q5R3I4 469 aa21.15■□□□□ 0.98
COL9A3-203ENST00000462700 TMCO2Q7Z6W1 182 aaPredicted RBP21.15■□□□□ 0.98
COL9A3-203ENST00000462700 LINC01465Q8N7H1 131 aa21.15■□□□□ 0.98
COL9A3-203ENST00000462700 WRAP73Q9P2S5 460 aaPredicted RBP21.15■□□□□ 0.98
COL9A3-203ENST00000462700 NOL7Q9UMY1 257 aaKnown RBP21.15■□□□□ 0.98
COL9A3-203ENST00000462700 AMHP03971 560 aa21.14■□□□□ 0.97
COL9A3-203ENST00000462700 TBC1D8BQ0IIM8 1120 aa21.14■□□□□ 0.97
COL9A3-203ENST00000462700 ZNF174Q15697 407 aa21.14■□□□□ 0.97
COL9A3-203ENST00000462700 MTERF2Q49AM1 385 aa21.14■□□□□ 0.97
COL9A3-203ENST00000462700 EFCAB12Q6NXP0 572 aa21.14■□□□□ 0.97
COL9A3-203ENST00000462700 ANO5Q75V66 913 aa21.14■□□□□ 0.97
COL9A3-203ENST00000462700 LRRC71Q8N4P6 559 aa21.14■□□□□ 0.97
COL9A3-203ENST00000462700 USP38Q8NB14 1042 aa21.14■□□□□ 0.97
COL9A3-203ENST00000462700 DYDC2Q96IM9 177 aa21.14■□□□□ 0.97
COL9A3-203ENST00000462700 CEP89Q96ST8 783 aa21.14■□□□□ 0.97
COL9A3-203ENST00000462700 LXNQ9BS40 222 aa21.14■□□□□ 0.97
COL9A3-203ENST00000462700 AGO3Q9H9G7 860 aaKnown RBP21.14■□□□□ 0.97
COL9A3-203ENST00000462700 SLC28A3Q9HAS3 691 aa21.14■□□□□ 0.97
COL9A3-203ENST00000462700 MYH9P35579 1960 aaKnown RBP21.14■□□□□ 0.97
COL9A3-203ENST00000462700 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.13■□□□□ 0.97
COL9A3-203ENST00000462700 DDX11L8A8MPP1 907 aa21.13■□□□□ 0.97
COL9A3-203ENST00000462700 TLL1O43897 1013 aa21.13■□□□□ 0.97
COL9A3-203ENST00000462700 GJB5O95377 273 aa21.13■□□□□ 0.97
COL9A3-203ENST00000462700 VTNP04004 478 aa21.13■□□□□ 0.97
COL9A3-203ENST00000462700 CA3P07451 260 aa21.13■□□□□ 0.97
COL9A3-203ENST00000462700 TMOD1P28289 359 aa21.13■□□□□ 0.97
COL9A3-203ENST00000462700 CD52P31358 61 aa21.13■□□□□ 0.97
COL9A3-203ENST00000462700 C4orf19Q8IY42 314 aa21.13■□□□□ 0.97
COL9A3-203ENST00000462700 MYOCDQ8IZQ8 938 aa21.13■□□□□ 0.97
COL9A3-203ENST00000462700 CDX2Q99626 313 aaPredicted RBP21.13■□□□□ 0.97
COL9A3-203ENST00000462700 SH2D3AQ9BRG2 576 aa21.13■□□□□ 0.97
COL9A3-203ENST00000462700 RGL1Q9NZL6 768 aa21.13■□□□□ 0.97
COL9A3-203ENST00000462700 GINS2Q9Y248 185 aa21.13■□□□□ 0.97
COL9A3-203ENST00000462700 PTPRSQ13332 1948 aa21.12■□□□□ 0.97
COL9A3-203ENST00000462700 GBF1Q92538 1859 aa21.12■□□□□ 0.97
COL9A3-203ENST00000462700 H3BQV1 296 aa21.12■□□□□ 0.97
COL9A3-203ENST00000462700 CYP4A11Q02928 519 aa21.12■□□□□ 0.97
COL9A3-203ENST00000462700 NBR1Q14596 966 aa21.12■□□□□ 0.97
COL9A3-203ENST00000462700 GRIN2CQ14957 1233 aa21.12■□□□□ 0.97
COL9A3-203ENST00000462700 KIZQ2M2Z5 673 aa21.12■□□□□ 0.97
COL9A3-203ENST00000462700 PPP2R2DQ66LE6 453 aa21.12■□□□□ 0.97
COL9A3-203ENST00000462700 PLA2G4FQ68DD2 849 aa21.12■□□□□ 0.97
COL9A3-203ENST00000462700 MAP7D2Q96T17 732 aa21.12■□□□□ 0.97
COL9A3-203ENST00000462700 PPP1R16BQ96T49 567 aa21.12■□□□□ 0.97
COL9A3-203ENST00000462700 EIF2AK1Q9BQI3 630 aaKnown RBP21.12■□□□□ 0.97
COL9A3-203ENST00000462700 ZBED2Q9BTP6 218 aa21.12■□□□□ 0.97
COL9A3-203ENST00000462700 CDHR5Q9HBB8 845 aa21.12■□□□□ 0.97
COL9A3-203ENST00000462700 AKT3Q9Y243 479 aa21.12■□□□□ 0.97
COL9A3-203ENST00000462700 STXBP5LQ9Y2K9 1186 aa21.12■□□□□ 0.97
COL9A3-203ENST00000462700 WDR81Q562E7 1941 aa21.12■□□□□ 0.97
COL9A3-203ENST00000462700 GPR32O75388 356 aa21.11■□□□□ 0.97
COL9A3-203ENST00000462700 SLITRK3O94933 977 aa21.11■□□□□ 0.97
COL9A3-203ENST00000462700 OR52Z1P0C646 297 aa21.11■□□□□ 0.97
COL9A3-203ENST00000462700 TOB1P50616 345 aaPredicted RBP21.11■□□□□ 0.97
COL9A3-203ENST00000462700 PAK2Q13177 524 aa21.11■□□□□ 0.97
COL9A3-203ENST00000462700 CTTNQ14247 550 aaKnown RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms