RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 TBC1D8BQ0IIM8 1120 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 PKDCCQ504Y2 493 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 CRTC3Q6UUV7 619 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.71□□□□□ -1.82
SMC4-203ENST00000462668 TTLL11Q8NHH1 800 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 SLC30A5Q8TAD4 765 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 LRTOMTQ8WZ04 291 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 EID2BQ96D98 161 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 TCTN2Q96GX1 697 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 HEXIM2Q96MH2 286 aaKnown RBP3.71□□□□□ -1.82
SMC4-203ENST00000462668 NEUROD6Q96NK8 337 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 CDC5LQ99459 802 aaKnown RBP3.71□□□□□ -1.82
SMC4-203ENST00000462668 PITHD1Q9GZP4 211 aaPredicted RBP3.71□□□□□ -1.82
SMC4-203ENST00000462668 MKNK2Q9HBH9 465 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 RAD18Q9NS91 495 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 NOC2LQ9Y3T9 749 aaKnown RBP3.71□□□□□ -1.82
SMC4-203ENST00000462668 LCHNA4D1U4 455 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 ADAMTS3O15072 1205 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 KDM1AO60341 852 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 THP07101 528 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 SLC9A1P19634 815 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 CYP7A1P22680 504 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 PDIA3P30101 505 aaKnown RBP3.71□□□□□ -1.82
SMC4-203ENST00000462668 SCAND1P57086 179 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 CFAP161Q6P656 301 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 AMIGO3Q86WK7 504 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 CYP2W1Q8TAV3 490 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 DDX11Q96FC9 970 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 MAP3K14Q99558 947 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 STK33Q9BYT3 514 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 ALG13Q9NP73 1137 aaKnown RBP3.71□□□□□ -1.82
SMC4-203ENST00000462668 POLG2Q9UHN1 485 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 LIMCH1Q9UPQ0 1083 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 TELO2Q9Y4R8 837 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 DDX58O95786 925 aaKnown RBP3.7□□□□□ -1.82
SMC4-203ENST00000462668 CT47B1P0C2W7 299 aaPredicted RBP3.7□□□□□ -1.82
SMC4-203ENST00000462668 ARL4CP56559 192 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 IFIT5Q13325 482 aaKnown RBP3.7□□□□□ -1.82
SMC4-203ENST00000462668 NUTM2GQ5VZR2 741 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 NEK10Q6ZWH5 1172 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 LZTR1Q8N653 840 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 CFAP20Q9Y6A4 193 aaKnown RBP3.7□□□□□ -1.82
SMC4-203ENST00000462668 CC2D2AQ9P2K1 1620 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 CAPN8A6NHC0 703 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 LCE2BO14633 110 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 ALDH2P05091 517 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 SRGAP2CP0DJJ0 459 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 PTX3P26022 381 aaPredicted RBP3.7□□□□□ -1.82
SMC4-203ENST00000462668 CORO7P57737 925 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 PGS1Q32NB8 556 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 TTLL5Q6EMB2 1281 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 CDPF1Q6NVV7 123 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 CYP2R1Q6VVX0 501 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 RNF111Q6ZNA4 994 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 WAPLQ7Z5K2 1190 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 THAP5Q7Z6K1 395 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 TSPYL5Q86VY4 417 aaPredicted RBP3.7□□□□□ -1.82
SMC4-203ENST00000462668 ZNF354CQ86Y25 554 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 PLBD2Q8NHP8 589 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 ADAMTS18Q8TE60 1221 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.7□□□□□ -1.826e-8■■■■□ 23.9
SMC4-203ENST00000462668 TTC14Q96N46 770 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 KCNH3Q9ULD8 1083 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 A0A1W2PPC4 97 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.7□□□□□ -1.82
SMC4-203ENST00000462668 OSTM1Q86WC4 334 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 COL23A1Q86Y22 540 aaPredicted RBP3.7□□□□□ -1.82
SMC4-203ENST00000462668 UNKQ9C0B0 810 aaKnown RBP3.7□□□□□ -1.82
SMC4-203ENST00000462668 SLC6A20Q9NP91 592 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 KCNH7Q9NS40 1196 aa3.7□□□□□ -1.82
SMC4-203ENST00000462668 TNFSF4P23510 183 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 THBS2P35442 1172 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 HERVK_113P62684 666 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 IRF9Q00978 393 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 LMOD3Q0VAK6 560 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 GALNT1Q10472 559 aaPredicted RBP3.69□□□□□ -1.82
SMC4-203ENST00000462668 LAPTM4AQ15012 233 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 TMTC1Q8IUR5 882 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 NGDNQ8NEJ9 315 aaKnown RBP3.69□□□□□ -1.82
SMC4-203ENST00000462668 EDARADDQ8WWZ3 215 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 KIAA1191Q96A73 305 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 CGRRF1Q99675 332 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 DNAJC28Q9NX36 388 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 PRSS38A1L453 326 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 ISM1B1AKI9 464 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 NKRFO15226 690 aaKnown RBP eCLIP3.69□□□□□ -1.82
SMC4-203ENST00000462668 PQBP1O60828 265 aaKnown RBP3.69□□□□□ -1.82
SMC4-203ENST00000462668 MTHFD2P13995 350 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 TEKQ02763 1124 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 DDX10Q13206 875 aaKnown RBP3.69□□□□□ -1.82
SMC4-203ENST00000462668 DPY19L1Q2PZI1 675 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 DZIP1LQ8IYY4 767 aaKnown RBP3.69□□□□□ -1.82
SMC4-203ENST00000462668 NLGN4XQ8N0W4 816 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 TRAPPC12Q8WVT3 735 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 TBC1D20Q96BZ9 403 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 TRIM11Q96F44 468 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 LRGUKQ96M69 825 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 G6PC3Q9BUM1 346 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 ZHX3Q9H4I2 956 aa3.69□□□□□ -1.82
SMC4-203ENST00000462668 F5H423 210 aaPredicted RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms