RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 NTRK3Q16288 839 aa9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 WWC2Q6AWC2 1192 aa9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 SYNE3Q6ZMZ3 975 aa9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 EP400NLQ6ZTU2 488 aa9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 ADGRD2Q7Z7M1 963 aa9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 CCDC82Q8N4S0 544 aa9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 TRAPPC12Q8WVT3 735 aa9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 SEPT1Q8WYJ6 367 aa9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 CDHR1Q96JP9 859 aa9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 MSLNLQ96KJ4 702 aa9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 PLVAPQ9BX97 442 aa9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 ALG13Q9NP73 1137 aaKnown RBP9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 JADE2Q9NQC1 790 aa9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 SEC63Q9UGP8 760 aaKnown RBP9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 PLAGL2Q9UPG8 496 aa9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 IGSF9BQ9UPX0 1349 aa9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 DENND4AQ7Z401 1863 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 STXBP3O00186 592 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 NCK2O43639 380 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 GLP2RO95838 553 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 ITGB1P05556 798 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 INSRRP14616 1297 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 PDIA3P30101 505 aaKnown RBP9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 GATMP50440 423 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 IGBP1P78318 339 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 NHLH1Q02575 133 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 TMEM62Q0P6H9 643 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 ITGB3BPQ13352 177 aaPredicted RBP9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 ADAM15Q13444 863 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 HERC4Q5GLZ8 1057 aaPredicted RBP9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 HFE2Q6ZVN8 426 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 RSPH3Q86UC2 560 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 ALYREFQ86V81 257 aaKnown RBP9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 CMTR2Q8IYT2 770 aaKnown RBP9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 CYP2W1Q8TAV3 490 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 GLG1Q92896 1179 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 P2RX5Q93086 422 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 FBXL18Q96ME1 805 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 LARP6Q9BRS8 491 aaKnown RBP9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 FAM49AQ9H0Q0 323 aaPredicted RBP9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 TMX1Q9H3N1 280 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 SMARCAD1Q9H4L7 1026 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 PSTPIP2Q9H939 334 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 NCOA5Q9HCD5 579 aaKnown RBP9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 JPH1Q9HDC5 661 aaPredicted RBP9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 CLEC1BQ9P126 229 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 MUTYHQ9UIF7 546 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 PCDHA6Q9UN73 950 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 FAM50BQ9Y247 325 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 PCDHA8Q9Y5H6 950 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 CYP46A1Q9Y6A2 500 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 PLXNA3P51805 1871 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 RIF1Q5UIP0 2472 aaKnown RBP9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 NFASCO94856 1347 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 KDM3AQ9Y4C1 1321 aa9.04□□□□□ -0.96
CDC42BPA-210ENST00000462553 DMXL1Q9Y485 3027 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 ADAMTS3O15072 1205 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 MGEA5O60502 916 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 EYA4O95677 639 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 ACTR2P61160 394 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 CCT2P78371 535 aaKnown RBP9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 FGD1P98174 961 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 PLCB4Q15147 1175 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 PKN1Q16512 942 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 CSPP1Q1MSJ5 1256 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 PAN2Q504Q3 1202 aaKnown RBP9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 PPP1R18Q6NYC8 613 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 HEATR3Q7Z4Q2 680 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 RNF135Q8IUD6 432 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 NPAS4Q8IUM7 802 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 KLHL23Q8NBE8 558 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 SMRP1Q8NCR6 262 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 SPPL3Q8TCT6 385 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 PHKBQ93100 1093 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 PGBD1Q96JS3 809 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 UIMC1Q96RL1 719 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 KCNH7Q9NS40 1196 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 BARHL2Q9NY43 387 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 SLC9A2Q9UBY0 812 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 CD207Q9UJ71 328 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 NAP1L2Q9ULW6 460 aaPredicted RBP9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 PADI3Q9ULW8 664 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 PCDHGC5Q9Y5F6 944 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 PCDHA2Q9Y5H9 948 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 TRPV2Q9Y5S1 764 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 SQORQ9Y6N5 450 aa9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 V9GY48 417 aaPredicted RBP9.03□□□□□ -0.96
CDC42BPA-210ENST00000462553 ZNF292O60281 2723 aa9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 IGKV6D-21A0A0A0MT36 114 aa9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 RRN3P2A6NIE6 340 aa9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 SPDYE3A6NKU9 549 aa9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 hCG_1984214I3L0E3 225 aa9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 CCNE2O96020 404 aa9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 RPLP2P05387 115 aaKnown RBP9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 ARP10275 920 aa9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 SCG2P13521 617 aa9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 IFNAR1P17181 557 aa9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 CLK2P49760 499 aaKnown RBP9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 MRE11P49959 708 aa9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 PAK2Q13177 524 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms