RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 MMS22LQ6ZRQ5 1243 aa8.08□□□□□ -1.12
SREBF2-204ENST00000462539 KCTD1Q719H9 257 aa8.08□□□□□ -1.12
SREBF2-204ENST00000462539 MAATS1Q7Z4T9 603 aa8.08□□□□□ -1.12
SREBF2-204ENST00000462539 CERS5Q8N5B7 392 aa8.08□□□□□ -1.12
SREBF2-204ENST00000462539 METTL13Q8N6R0 699 aa8.08□□□□□ -1.12
SREBF2-204ENST00000462539 SYT2Q8N9I0 419 aaPredicted RBP8.08□□□□□ -1.12
SREBF2-204ENST00000462539 ERMNQ8TAM6 284 aa8.08□□□□□ -1.12
SREBF2-204ENST00000462539 ZNF473Q8WTR7 871 aaKnown RBP8.08□□□□□ -1.12
SREBF2-204ENST00000462539 LRRC45Q96CN5 670 aa8.08□□□□□ -1.12
SREBF2-204ENST00000462539 SPAG5Q96R06 1193 aa8.08□□□□□ -1.12
SREBF2-204ENST00000462539 CRAMP1Q96RY5 1269 aa8.08□□□□□ -1.12
SREBF2-204ENST00000462539 REEP2Q9BRK0 252 aa8.08□□□□□ -1.12
SREBF2-204ENST00000462539 NEUROG2Q9H2A3 272 aa8.08□□□□□ -1.12
SREBF2-204ENST00000462539 SLITRK6Q9H5Y7 841 aa8.08□□□□□ -1.12
SREBF2-204ENST00000462539 METTL14Q9HCE5 456 aaKnown RBP8.08□□□□□ -1.12
SREBF2-204ENST00000462539 SUCLA2Q9P2R7 463 aaPredicted RBP8.08□□□□□ -1.12
SREBF2-204ENST00000462539 NAGPAQ9UK23 515 aa8.08□□□□□ -1.12
SREBF2-204ENST00000462539 NFS1Q9Y697 457 aa8.08□□□□□ -1.12
SREBF2-204ENST00000462539 STK24Q9Y6E0 443 aa8.08□□□□□ -1.12
SREBF2-204ENST00000462539 UBE4BO95155 1302 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 GTPBP10A4D1E9 387 aaKnown RBP8.07□□□□□ -1.12
SREBF2-204ENST00000462539 MPHOSPH10O00566 681 aaKnown RBP8.07□□□□□ -1.12
SREBF2-204ENST00000462539 DDX3XO00571 662 aaKnown RBP eCLIP8.07□□□□□ -1.12
SREBF2-204ENST00000462539 MEIS2O14770 477 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 PPEF1O14829 653 aaPredicted RBP8.07□□□□□ -1.12
SREBF2-204ENST00000462539 BBOX1O75936 387 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 FLOT1O75955 427 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 AKAP3O75969 853 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 GFPT2O94808 682 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 H2AFZP0C0S5 128 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 SPATA31C1P0DKV0 1188 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 FERP16591 822 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 RPA1P27694 616 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 MDH1P40925 334 aaKnown RBP8.07□□□□□ -1.12
SREBF2-204ENST00000462539 FNTAP49354 379 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 MMP14P50281 582 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 NPEPPSP55786 919 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 RNASE9P60153 205 aaKnown RBP8.07□□□□□ -1.12
SREBF2-204ENST00000462539 PSMC6P62333 389 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 ARHGAP4P98171 946 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 HDLBPQ00341 1268 aaKnown RBP8.07□□□□□ -1.12
SREBF2-204ENST00000462539 ZNF844Q08AG5 666 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 MTMR3Q13615 1198 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 HLTFQ14527 1009 aaKnown RBP eCLIP8.07□□□□□ -1.12
SREBF2-204ENST00000462539 NFIL3Q16649 462 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 DCAF17Q5H9S7 520 aaPredicted RBP8.07□□□□□ -1.12
SREBF2-204ENST00000462539 MCTP2Q6DN12 878 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 CDC42EP5Q6NZY7 148 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 ALKBH5Q6P6C2 394 aaKnown RBP8.07□□□□□ -1.12
SREBF2-204ENST00000462539 KCNV1Q6PIU1 500 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 FAM196AQ6ZSG2 479 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 MICALCLQ6ZW33 695 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 H2AFVQ71UI9 128 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 NLRP14Q86W24 1093 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 CATSPER3Q86XQ3 398 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 LNX1Q8TBB1 728 aaPredicted RBP8.07□□□□□ -1.12
SREBF2-204ENST00000462539 MYCBPAPQ8TBZ2 947 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 SLC35C1Q96A29 364 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 LENG9Q96B70 501 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 CCDC17Q96LX7 622 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 UIMC1Q96RL1 719 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 P2RX7Q99572 595 aaKnown RBP8.07□□□□□ -1.12
SREBF2-204ENST00000462539 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.07□□□□□ -1.123e-10■□□□□ 11
SREBF2-204ENST00000462539 RUSC1Q9BVN2 902 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 COA1Q9GZY4 146 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 GOLPH3Q9H4A6 298 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 ZHX3Q9H4I2 956 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 DNAJC18Q9H819 358 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 USP40Q9NVE5 1235 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 GCNT4Q9P109 453 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 GGA2Q9UJY4 613 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 VAV3Q9UKW4 847 aa8.07□□□□□ -1.12
SREBF2-204ENST00000462539 ARID2Q68CP9 1835 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 RSPH10B2B2RC85 870 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 C6orf229H3BNL8 230 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 MYO1FO00160 1098 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 TULP1O00294 542 aaPredicted RBP8.06□□□□□ -1.12
SREBF2-204ENST00000462539 MEIS1O00470 390 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 EIF3DO15371 548 aaKnown RBP eCLIP8.06□□□□□ -1.12
SREBF2-204ENST00000462539 MEFVO15553 781 aaPredicted RBP8.06□□□□□ -1.12
SREBF2-204ENST00000462539 TBCAO75347 108 aaKnown RBP8.06□□□□□ -1.12
SREBF2-204ENST00000462539 KIAA0754O94854 1291 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 EYA4O95677 639 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 SERPINB2P05120 415 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 PAEPP09466 180 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 RSPH10BP0C881 870 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 XRCC5P13010 732 aaKnown RBP8.06□□□□□ -1.12
SREBF2-204ENST00000462539 GYS1P13807 737 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 GAP43P17677 238 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 CIITAP33076 1130 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 SREBF1P36956 1147 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 PABPC4Q13310 644 aaKnown RBP eCLIP8.06□□□□□ -1.12
SREBF2-204ENST00000462539 BIRC3Q13489 604 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 SKIDA1Q1XH10 827 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 PRR16Q569H4 304 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 SLFN13Q68D06 897 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 ZNF772Q68DY9 489 aaPredicted RBP8.06□□□□□ -1.12
SREBF2-204ENST00000462539 GJB7Q6PEY0 223 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 PEX26Q7Z412 305 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 YTHDF3Q7Z739 585 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms