RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 ZBED2Q9BTP6 218 aa20.84■□□□□ 0.93
CDKN1A-206ENST00000462537 IFIH1Q9BYX4 1025 aaKnown RBP20.84■□□□□ 0.93
CDKN1A-206ENST00000462537 FOXP1Q9H334 677 aaPredicted RBP20.84■□□□□ 0.93
CDKN1A-206ENST00000462537 SLC28A3Q9HAS3 691 aa20.84■□□□□ 0.93
CDKN1A-206ENST00000462537 SEPT9Q9UHD8 586 aaPredicted RBP20.84■□□□□ 0.93
CDKN1A-206ENST00000462537 VAV3Q9UKW4 847 aa20.84■□□□□ 0.93
CDKN1A-206ENST00000462537 TRPV2Q9Y5S1 764 aa20.84■□□□□ 0.93
CDKN1A-206ENST00000462537 MICAL3Q7RTP6 2002 aa20.83■□□□□ 0.93
CDKN1A-206ENST00000462537 KIF28PB7ZC32 967 aa20.83■□□□□ 0.93
CDKN1A-206ENST00000462537 EML1O00423 815 aa20.83■□□□□ 0.93
CDKN1A-206ENST00000462537 C22orf31O95567 290 aa20.83■□□□□ 0.93
CDKN1A-206ENST00000462537 NCAPH2Q6IBW4 605 aa20.83■□□□□ 0.93
CDKN1A-206ENST00000462537 TMCO2Q7Z6W1 182 aaPredicted RBP20.83■□□□□ 0.93
CDKN1A-206ENST00000462537 NME8Q8N427 588 aa20.83■□□□□ 0.93
CDKN1A-206ENST00000462537 APBB2Q92870 758 aa20.83■□□□□ 0.93
CDKN1A-206ENST00000462537 EVPLQ92817 2033 aa20.83■□□□□ 0.92
CDKN1A-206ENST00000462537 WNT7AO00755 349 aa20.82■□□□□ 0.92
CDKN1A-206ENST00000462537 TLL1O43897 1013 aa20.82■□□□□ 0.92
CDKN1A-206ENST00000462537 AMHP03971 560 aa20.82■□□□□ 0.92
CDKN1A-206ENST00000462537 LPIN1Q14693 890 aa20.82■□□□□ 0.92
CDKN1A-206ENST00000462537 FBXO47Q5MNV8 452 aa20.82■□□□□ 0.92
CDKN1A-206ENST00000462537 PPP2R2DQ66LE6 453 aa20.82■□□□□ 0.92
CDKN1A-206ENST00000462537 GINS2Q9Y248 185 aa20.82■□□□□ 0.92
CDKN1A-206ENST00000462537 LOXHD1Q8IVV2 1947 aa20.82■□□□□ 0.92
CDKN1A-206ENST00000462537 MAGEB2O15479 319 aa20.81■□□□□ 0.92
CDKN1A-206ENST00000462537 MCM7P33993 719 aa20.81■□□□□ 0.92
CDKN1A-206ENST00000462537 PSMC5P62195 406 aa20.81■□□□□ 0.92
CDKN1A-206ENST00000462537 XKR3Q5GH77 459 aa20.81■□□□□ 0.92
CDKN1A-206ENST00000462537 FAM117BQ6P1L5 589 aa20.81■□□□□ 0.92
CDKN1A-206ENST00000462537 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.81■□□□□ 0.92
CDKN1A-206ENST00000462537 TSHZ1Q6ZSZ6 1077 aa20.81■□□□□ 0.92
CDKN1A-206ENST00000462537 NOSTRINQ8IVI9 506 aa20.81■□□□□ 0.92
CDKN1A-206ENST00000462537 KIAA0319LQ8IZA0 1049 aa20.81■□□□□ 0.92
CDKN1A-206ENST00000462537 MYOCDQ8IZQ8 938 aa20.81■□□□□ 0.92
CDKN1A-206ENST00000462537 PPP1R16BQ96T49 567 aa20.81■□□□□ 0.92
CDKN1A-206ENST00000462537 CDX2Q99626 313 aaPredicted RBP20.81■□□□□ 0.92
CDKN1A-206ENST00000462537 CELF4Q9BZC1 486 aaKnown RBP20.81■□□□□ 0.92
CDKN1A-206ENST00000462537 DDX11L8A8MPP1 907 aa20.8■□□□□ 0.92
CDKN1A-206ENST00000462537 CA3P07451 260 aa20.8■□□□□ 0.92
CDKN1A-206ENST00000462537 TMOD1P28289 359 aa20.8■□□□□ 0.92
CDKN1A-206ENST00000462537 GJB2P29033 226 aa20.8■□□□□ 0.92
CDKN1A-206ENST00000462537 TXKP42681 527 aa20.8■□□□□ 0.92
CDKN1A-206ENST00000462537 TBC1D8BQ0IIM8 1120 aa20.8■□□□□ 0.92
CDKN1A-206ENST00000462537 GRIN2CQ14957 1233 aa20.8■□□□□ 0.92
CDKN1A-206ENST00000462537 MTERF2Q49AM1 385 aa20.8■□□□□ 0.92
CDKN1A-206ENST00000462537 EFCAB12Q6NXP0 572 aa20.8■□□□□ 0.92
CDKN1A-206ENST00000462537 LRRC71Q8N4P6 559 aa20.8■□□□□ 0.92
CDKN1A-206ENST00000462537 MYLIPQ8WY64 445 aa20.8■□□□□ 0.92
CDKN1A-206ENST00000462537 NOL7Q9UMY1 257 aaKnown RBP20.8■□□□□ 0.92
CDKN1A-206ENST00000462537 PCDHA12Q9UN75 941 aa20.8■□□□□ 0.92
CDKN1A-206ENST00000462537 SMC3Q9UQE7 1217 aa20.8■□□□□ 0.92
CDKN1A-206ENST00000462537 STXBP5LQ9Y2K9 1186 aa20.8■□□□□ 0.92
CDKN1A-206ENST00000462537 TMEM150BA6NC51 233 aa20.79■□□□□ 0.92
CDKN1A-206ENST00000462537 DKC1O60832 514 aaKnown RBP eCLIP20.79■□□□□ 0.928e-30■■■■■ 47.9
CDKN1A-206ENST00000462537 P4HBP07237 508 aaKnown RBP20.79■□□□□ 0.92
CDKN1A-206ENST00000462537 CD52P31358 61 aa20.79■□□□□ 0.92
CDKN1A-206ENST00000462537 QARSP47897 775 aaKnown RBP20.79■□□□□ 0.92
CDKN1A-206ENST00000462537 CLCN3P51790 818 aa20.79■□□□□ 0.92
CDKN1A-206ENST00000462537 PAK2Q13177 524 aa20.79■□□□□ 0.92
CDKN1A-206ENST00000462537 EPHA7Q15375 998 aa20.79■□□□□ 0.92
CDKN1A-206ENST00000462537 MAP7D2Q96T17 732 aa20.79■□□□□ 0.92
CDKN1A-206ENST00000462537 TTC12Q9H892 705 aaPredicted RBP20.79■□□□□ 0.92
CDKN1A-206ENST00000462537 SUGCTQ9HAC7 445 aa20.79■□□□□ 0.92
CDKN1A-206ENST00000462537 AKT3Q9Y243 479 aa20.79■□□□□ 0.92
CDKN1A-206ENST00000462537 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.79■□□□□ 0.92
CDKN1A-206ENST00000462537 GJB5O95377 273 aa20.78■□□□□ 0.92
CDKN1A-206ENST00000462537 VTNP04004 478 aa20.78■□□□□ 0.92
CDKN1A-206ENST00000462537 SPIRE1Q08AE8 756 aa20.78■□□□□ 0.92
CDKN1A-206ENST00000462537 ZNF174Q15697 407 aa20.78■□□□□ 0.92
CDKN1A-206ENST00000462537 KIZQ2M2Z5 673 aa20.78■□□□□ 0.92
CDKN1A-206ENST00000462537 MCTP1Q6DN14 999 aa20.78■□□□□ 0.92
CDKN1A-206ENST00000462537 USP38Q8NB14 1042 aa20.78■□□□□ 0.92
CDKN1A-206ENST00000462537 DYDC2Q96IM9 177 aa20.78■□□□□ 0.92
CDKN1A-206ENST00000462537 SH2D3AQ9BRG2 576 aa20.78■□□□□ 0.92
CDKN1A-206ENST00000462537 LXNQ9BS40 222 aa20.78■□□□□ 0.92
CDKN1A-206ENST00000462537 NIFKQ9BYG3 293 aaKnown RBP20.78■□□□□ 0.92
CDKN1A-206ENST00000462537 AGO3Q9H9G7 860 aaKnown RBP20.78■□□□□ 0.92
CDKN1A-206ENST00000462537 SQORQ9Y6N5 450 aa20.78■□□□□ 0.92
CDKN1A-206ENST00000462537 KDM3AQ9Y4C1 1321 aa20.78■□□□□ 0.92
CDKN1A-206ENST00000462537 H3BQV1 296 aa20.77■□□□□ 0.92
CDKN1A-206ENST00000462537 UPP2O95045 317 aa20.77■□□□□ 0.92
CDKN1A-206ENST00000462537 FOSL2P15408 326 aa20.77■□□□□ 0.92
CDKN1A-206ENST00000462537 CYP4A11Q02928 519 aa20.77■□□□□ 0.92
CDKN1A-206ENST00000462537 MKRN4PQ13434 485 aaPredicted RBP20.77■□□□□ 0.92
CDKN1A-206ENST00000462537 TTC38Q5R3I4 469 aa20.77■□□□□ 0.92
CDKN1A-206ENST00000462537 TMEM60Q9H2L4 133 aa20.77■□□□□ 0.92
CDKN1A-206ENST00000462537 PRDM12Q9H4Q4 367 aa20.77■□□□□ 0.92
CDKN1A-206ENST00000462537 RGL1Q9NZL6 768 aa20.77■□□□□ 0.92
CDKN1A-206ENST00000462537 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.76■□□□□ 0.91
CDKN1A-206ENST00000462537 STBD1O95210 358 aa20.76■□□□□ 0.91
CDKN1A-206ENST00000462537 U2AF2P26368 475 aaKnown RBP eCLIP20.76■□□□□ 0.91
CDKN1A-206ENST00000462537 CTTNQ14247 550 aaKnown RBP20.76■□□□□ 0.91
CDKN1A-206ENST00000462537 TARBP2Q15633 366 aaKnown RBP20.76■□□□□ 0.91
CDKN1A-206ENST00000462537 TMEM266Q2M3C6 531 aa20.76■□□□□ 0.91
CDKN1A-206ENST00000462537 PLA2G4FQ68DD2 849 aa20.76■□□□□ 0.91
CDKN1A-206ENST00000462537 ANO5Q75V66 913 aa20.76■□□□□ 0.91
CDKN1A-206ENST00000462537 TPH2Q8IWU9 490 aa20.76■□□□□ 0.91
CDKN1A-206ENST00000462537 SCLT1Q96NL6 688 aa20.76■□□□□ 0.91
CDKN1A-206ENST00000462537 MTMR9Q96QG7 549 aa20.76■□□□□ 0.91
CDKN1A-206ENST00000462537 GAS2L1Q99501 681 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms