RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 CYP4F12Q9HCS2 524 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 ANO2Q9NQ90 1003 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 LATS2Q9NRM7 1088 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 PPP1R9AQ9ULJ8 1098 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 RABGAP1Q9Y3P9 1069 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 GTF3C3Q9Y5Q9 886 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 SNX14Q9Y5W7 946 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 ZNF536O15090 1300 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 TNKSO95271 1327 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 VWA5AO00534 786 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 MPHOSPH10O00566 681 aaKnown RBP6.72□□□□□ -1.33
VPS36-202ENST00000462289 SH2B2O14492 632 aaPredicted RBP6.72□□□□□ -1.33
VPS36-202ENST00000462289 GAS2O43903 313 aaKnown RBP6.72□□□□□ -1.33
VPS36-202ENST00000462289 RANBP6O60518 1105 aaKnown RBP6.72□□□□□ -1.33
VPS36-202ENST00000462289 SMARCA1P28370 1054 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 LBX1P52954 281 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 OAZ1P54368 228 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 SP3Q02447 781 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 GHRHRQ02643 423 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 ZNF543Q08ER8 600 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 KRT32Q14532 448 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 CPSF6Q16630 551 aaKnown RBP eCLIP6.72□□□□□ -1.33
VPS36-202ENST00000462289 SGO2Q562F6 1265 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 EXOSC6Q5RKV6 272 aaKnown RBP6.72□□□□□ -1.33
VPS36-202ENST00000462289 GADL1Q6ZQY3 521 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 IQCA1Q86XH1 822 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 SHCBP1Q8NEM2 672 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 ASAP3Q8TDY4 903 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 DCAF4Q8WV16 495 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 TMEM87BQ96K49 555 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 KIF2CQ99661 725 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 MAF1Q9H063 256 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 ALDH8A1Q9H2A2 487 aaPredicted RBP6.72□□□□□ -1.33
VPS36-202ENST00000462289 RPAP3Q9H6T3 665 aaPredicted RBP6.72□□□□□ -1.33
VPS36-202ENST00000462289 LY9Q9HBG7 655 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 SLC38A10Q9HBR0 1119 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 HOXC10Q9NYD6 342 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 TMOD4Q9NZQ9 345 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 BTBD7Q9P203 1132 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 CLIP2Q9UDT6 1046 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 EGFL7Q9UHF1 273 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 GJD2Q9UKL4 321 aa6.72□□□□□ -1.33
VPS36-202ENST00000462289 MKI67P46013 3256 aaKnown RBP6.72□□□□□ -1.33
VPS36-202ENST00000462289 EIF5BO60841 1220 aaKnown RBP6.71□□□□□ -1.34
VPS36-202ENST00000462289 FKTNO75072 461 aa6.71□□□□□ -1.34
VPS36-202ENST00000462289 HMGB1P09429 215 aaKnown RBP6.71□□□□□ -1.34
VPS36-202ENST00000462289 HOXC6P09630 235 aa6.71□□□□□ -1.34
VPS36-202ENST00000462289 MCM5P33992 734 aa6.71□□□□□ -1.34
VPS36-202ENST00000462289 RBM25P49756 843 aaKnown RBP6.71□□□□□ -1.34
VPS36-202ENST00000462289 IRAK1P51617 712 aa6.71□□□□□ -1.34
VPS36-202ENST00000462289 PRMT2P55345 433 aa6.71□□□□□ -1.34
VPS36-202ENST00000462289 ERVK-24P63145 666 aa6.71□□□□□ -1.34
VPS36-202ENST00000462289 GRM1Q13255 1194 aa6.71□□□□□ -1.34
VPS36-202ENST00000462289 FAM83BQ5T0W9 1011 aa6.71□□□□□ -1.34
VPS36-202ENST00000462289 GPATCH4Q5T3I0 446 aaKnown RBP6.71□□□□□ -1.34
VPS36-202ENST00000462289 SLFN13Q68D06 897 aa6.71□□□□□ -1.34
VPS36-202ENST00000462289 RASGRP2Q7LDG7 609 aa6.71□□□□□ -1.34
VPS36-202ENST00000462289 ABRAQ8N0Z2 381 aa6.71□□□□□ -1.34
VPS36-202ENST00000462289 LRRC47Q8N1G4 583 aaKnown RBP6.71□□□□□ -1.34
VPS36-202ENST00000462289 PRPF38AQ8NAV1 312 aaKnown RBP6.71□□□□□ -1.34
VPS36-202ENST00000462289 FEZ1Q99689 392 aa6.71□□□□□ -1.34
VPS36-202ENST00000462289 RANBP17Q9H2T7 1088 aaKnown RBP6.71□□□□□ -1.34
VPS36-202ENST00000462289 FBXO28Q9NVF7 368 aa6.71□□□□□ -1.34
VPS36-202ENST00000462289 FEM1BQ9UK73 627 aa6.71□□□□□ -1.34
VPS36-202ENST00000462289 KIAA1217Q5T5P2 1943 aa6.71□□□□□ -1.34
VPS36-202ENST00000462289 DNAJC25-GNG10A0A024R161 153 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 CARNS1A5YM72 827 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 METTL12A8MUP2 240 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 WDR64B1ANS9 1081 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 DDAH1O94760 285 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 XRCC5P13010 732 aaKnown RBP6.7□□□□□ -1.34
VPS36-202ENST00000462289 ZKSCAN1P17029 563 aaPredicted RBP6.7□□□□□ -1.34
VPS36-202ENST00000462289 STAT2P52630 851 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 IRX3P78415 501 aaPredicted RBP6.7□□□□□ -1.34
VPS36-202ENST00000462289 TRDNQ13061 729 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 ZNF211Q13398 564 aaPredicted RBP6.7□□□□□ -1.34
VPS36-202ENST00000462289 GRB14Q14449 540 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 GRM4Q14833 912 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 TMEM132BQ14DG7 1078 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 PKN2Q16513 984 aaKnown RBP6.7□□□□□ -1.34
VPS36-202ENST00000462289 ECM1Q16610 540 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 ASPRV1Q53RT3 343 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 OTOP1Q7RTM1 612 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 FAM160B2Q86V87 743 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 RIOX2Q8IUF8 465 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 CCNJLQ8IV13 435 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 GALNT12Q8IXK2 581 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 SPICE1Q8N0Z3 855 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 STK11IPQ8N1F8 1099 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 TMTC2Q8N394 836 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 C12orf50Q8NA57 414 aaPredicted RBP6.7□□□□□ -1.34
VPS36-202ENST00000462289 EZH1Q92800 747 aaPredicted RBP6.7□□□□□ -1.34
VPS36-202ENST00000462289 ATG4CQ96DT6 458 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 ERO1AQ96HE7 468 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 MFSD14AQ96MC6 490 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 NEK1Q96PY6 1258 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 NUP88Q99567 741 aaPredicted RBP6.7□□□□□ -1.34
VPS36-202ENST00000462289 SLF1Q9BQI6 1058 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 SPATC1LQ9H0A9 340 aa6.7□□□□□ -1.34
VPS36-202ENST00000462289 PORCNQ9H237 461 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms