RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 WRAP73Q9P2S5 460 aaPredicted RBP11.88□□□□□ -0.51
RTF1-202ENST00000462276 CASP8AP2Q9UKL3 1982 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 MOXD2PA6NHM9 499 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 RRN3P2A6NIE6 340 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 MAGEB2O15479 319 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 SORBS3O60504 671 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 ADAMTS4O75173 837 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 CAVIN2O95810 425 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 SSBP05455 408 aaKnown RBP eCLIP11.87□□□□□ -0.51
RTF1-202ENST00000462276 GNAT1P11488 350 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 ATP4AP20648 1035 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 SCP2P22307 547 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 AFMP43652 599 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 SARSP49591 514 aaKnown RBP11.87□□□□□ -0.51
RTF1-202ENST00000462276 DPYDQ12882 1025 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 KCNB1Q14721 858 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 TARBP2Q15633 366 aaKnown RBP11.87□□□□□ -0.51
RTF1-202ENST00000462276 CAMK4Q16566 473 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 RINT1Q6NUQ1 792 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 PADI6Q6TGC4 694 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 C1orf186Q6ZWK4 172 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 GPBP1Q86WP2 473 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 CCDC65Q8IXS2 484 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 ZNF710Q8N1W2 664 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 SLC7A3Q8WY07 619 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 DDX12PQ92771 950 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 MTRQ99707 1265 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 MTG1Q9BT17 334 aaPredicted RBP11.87□□□□□ -0.51
RTF1-202ENST00000462276 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.87□□□□□ -0.51
RTF1-202ENST00000462276 PAK6Q9NQU5 681 aaPredicted RBP11.87□□□□□ -0.51
RTF1-202ENST00000462276 TUBE1Q9UJT0 475 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 ODF2LQ9ULJ1 636 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 COL4A3BPQ9Y5P4 624 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 COL1A2P08123 1366 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 MYH15Q9Y2K3 1946 aa11.87□□□□□ -0.51
RTF1-202ENST00000462276 SYNRGQ9UMZ2 1314 aa11.86□□□□□ -0.51
RTF1-202ENST00000462276 MYMKA6NI61 221 aa11.86□□□□□ -0.51
RTF1-202ENST00000462276 KRT18P05783 430 aaKnown RBP11.86□□□□□ -0.51
RTF1-202ENST00000462276 GAP43P17677 238 aa11.86□□□□□ -0.51
RTF1-202ENST00000462276 ABCD1P33897 745 aa11.86□□□□□ -0.51
RTF1-202ENST00000462276 PPP1R2P41236 205 aa11.86□□□□□ -0.51
RTF1-202ENST00000462276 RTP1P59025 263 aa11.86□□□□□ -0.51
RTF1-202ENST00000462276 PURAQ00577 322 aaKnown RBP11.86□□□□□ -0.51
RTF1-202ENST00000462276 PSMD2Q13200 908 aa11.86□□□□□ -0.51
RTF1-202ENST00000462276 PLCB4Q15147 1175 aa11.86□□□□□ -0.51
RTF1-202ENST00000462276 ZSCAN23Q3MJ62 389 aa11.86□□□□□ -0.51
RTF1-202ENST00000462276 CT47A1Q5JQC4 288 aaPredicted RBP11.86□□□□□ -0.51
RTF1-202ENST00000462276 LHX8Q68G74 356 aa11.86□□□□□ -0.51
RTF1-202ENST00000462276 SASS6Q6UVJ0 657 aa11.86□□□□□ -0.51
RTF1-202ENST00000462276 UNC13DQ70J99 1090 aa11.86□□□□□ -0.51
RTF1-202ENST00000462276 SLC17A8Q8NDX2 589 aa11.86□□□□□ -0.51
RTF1-202ENST00000462276 LRRC15Q8TF66 581 aa11.86□□□□□ -0.51
RTF1-202ENST00000462276 KIFAP3Q92845 792 aa11.86□□□□□ -0.51
RTF1-202ENST00000462276 DRC1Q96MC2 740 aa11.86□□□□□ -0.51
RTF1-202ENST00000462276 SEL1LQ9UBV2 794 aa11.86□□□□□ -0.51
RTF1-202ENST00000462276 SEPT9Q9UHD8 586 aaPredicted RBP11.86□□□□□ -0.51
RTF1-202ENST00000462276 TRPC6Q9Y210 931 aa11.86□□□□□ -0.51
RTF1-202ENST00000462276 TELO2Q9Y4R8 837 aa11.86□□□□□ -0.51
RTF1-202ENST00000462276 PCDHA5Q9Y5H7 936 aa11.86□□□□□ -0.51
RTF1-202ENST00000462276 NRCAMQ92823 1304 aa11.86□□□□□ -0.51
RTF1-202ENST00000462276 FRMD3A2A2Y4 597 aa11.85□□□□□ -0.51
RTF1-202ENST00000462276 HAS3O00219 553 aa11.85□□□□□ -0.51
RTF1-202ENST00000462276 TBCAO75347 108 aaKnown RBP11.85□□□□□ -0.51
RTF1-202ENST00000462276 PGK1P00558 417 aa11.85□□□□□ -0.51
RTF1-202ENST00000462276 RPN1P04843 607 aaKnown RBP11.85□□□□□ -0.51
RTF1-202ENST00000462276 RPLP2P05387 115 aaKnown RBP11.85□□□□□ -0.51
RTF1-202ENST00000462276 CCDC192P0DO97 292 aa11.85□□□□□ -0.51
RTF1-202ENST00000462276 ASIC1P78348 528 aa11.85□□□□□ -0.51
RTF1-202ENST00000462276 CDC42EP1Q00587 391 aa11.85□□□□□ -0.51
RTF1-202ENST00000462276 TBC1D8BQ0IIM8 1120 aa11.85□□□□□ -0.51
RTF1-202ENST00000462276 PNOCQ13519 176 aa11.85□□□□□ -0.51
RTF1-202ENST00000462276 DHX8Q14562 1220 aaKnown RBP11.85□□□□□ -0.51
RTF1-202ENST00000462276 ARSHQ5FYA8 562 aa11.85□□□□□ -0.51
RTF1-202ENST00000462276 CCSAPQ6IQ19 270 aaPredicted RBP11.85□□□□□ -0.51
RTF1-202ENST00000462276 TRIM50Q86XT4 487 aa11.85□□□□□ -0.51
RTF1-202ENST00000462276 RETREG2Q8NC44 543 aa11.85□□□□□ -0.51
RTF1-202ENST00000462276 SH3TC2Q8TF17 1288 aa11.85□□□□□ -0.51
RTF1-202ENST00000462276 TCP11Q8WWU5 503 aa11.85□□□□□ -0.51
RTF1-202ENST00000462276 DNAJC19Q96DA6 116 aa11.85□□□□□ -0.51
RTF1-202ENST00000462276 RNPEPQ9H4A4 650 aa11.85□□□□□ -0.51
RTF1-202ENST00000462276 DHX33Q9H6R0 707 aaKnown RBP11.85□□□□□ -0.51
RTF1-202ENST00000462276 ATP6V0A4Q9HBG4 840 aa11.85□□□□□ -0.51
RTF1-202ENST00000462276 PDLIM7Q9NR12 457 aa11.85□□□□□ -0.51
RTF1-202ENST00000462276 ANO10Q9NW15 660 aa11.85□□□□□ -0.51
RTF1-202ENST00000462276 LARSQ9P2J5 1176 aaKnown RBP11.85□□□□□ -0.51
RTF1-202ENST00000462276 LRRC37A2A6NM11 1700 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 ZBTB39O15060 712 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 MAFO75444 373 aaPredicted RBP11.84□□□□□ -0.51
RTF1-202ENST00000462276 RHOBTB3O94955 611 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 KIF20AO95235 890 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 GJB1P08034 283 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 MYL3P08590 195 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 MAPTP10636 758 aaKnown RBP11.84□□□□□ -0.51
RTF1-202ENST00000462276 CCL5P13501 91 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 TMOD1P28289 359 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 PSEN2P49810 448 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 DNM2P50570 870 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 ZNF131P52739 623 aa11.84□□□□□ -0.51
RTF1-202ENST00000462276 POLGP54098 1239 aaPredicted RBP11.84□□□□□ -0.51
RTF1-202ENST00000462276 NPEPPSP55786 919 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms