RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 USP17L22D6RA61 530 aa20.1■□□□□ 0.81
HPS3-204ENST00000462030 USP17L17D6RBQ6 530 aa20.1■□□□□ 0.81
HPS3-204ENST00000462030 USP17L19D6RCP7 530 aa20.1■□□□□ 0.81
HPS3-204ENST00000462030 USP17L20D6RJB6 530 aa20.1■□□□□ 0.81
HPS3-204ENST00000462030 XRCC5P13010 732 aaKnown RBP20.1■□□□□ 0.81
HPS3-204ENST00000462030 PSMC6P62333 389 aa20.1■□□□□ 0.81
HPS3-204ENST00000462030 USP17L24Q0WX57 530 aa20.1■□□□□ 0.81
HPS3-204ENST00000462030 USP17L6PQ6QN14 398 aa20.1■□□□□ 0.81
HPS3-204ENST00000462030 SEC14L1Q92503 715 aa20.1■□□□□ 0.81
HPS3-204ENST00000462030 TATDN2Q93075 761 aa20.1■□□□□ 0.81
HPS3-204ENST00000462030 PSTPIP2Q9H939 334 aa20.1■□□□□ 0.81
HPS3-204ENST00000462030 HAUS2Q9NVX0 235 aa20.1■□□□□ 0.81
HPS3-204ENST00000462030 TRAF3IP3Q9Y228 551 aa20.1■□□□□ 0.81
HPS3-204ENST00000462030 USP17L10C9JJH3 530 aa20.09■□□□□ 0.81
HPS3-204ENST00000462030 ATP2C2O75185 946 aa20.09■□□□□ 0.81
HPS3-204ENST00000462030 CASP4P49662 377 aa20.09■□□□□ 0.81
HPS3-204ENST00000462030 MRPL12P52815 198 aaKnown RBP20.09■□□□□ 0.81
HPS3-204ENST00000462030 JAM2P57087 298 aa20.09■□□□□ 0.81
HPS3-204ENST00000462030 PICALMQ13492 652 aa20.09■□□□□ 0.81
HPS3-204ENST00000462030 GRAPQ13588 217 aa20.09■□□□□ 0.81
HPS3-204ENST00000462030 CACNA2D3Q8IZS8 1091 aa20.09■□□□□ 0.81
HPS3-204ENST00000462030 CCDC26Q8TAB7 109 aa20.09■□□□□ 0.81
HPS3-204ENST00000462030 MDM1Q8TC05 714 aa20.09■□□□□ 0.81
HPS3-204ENST00000462030 GRAPLQ8TC17 118 aaPredicted RBP20.09■□□□□ 0.81
HPS3-204ENST00000462030 ATP8B4Q8TF62 1192 aa20.09■□□□□ 0.81
HPS3-204ENST00000462030 HES6Q96HZ4 224 aa20.09■□□□□ 0.81
HPS3-204ENST00000462030 CD209Q9NNX6 404 aa20.09■□□□□ 0.81
HPS3-204ENST00000462030 OSGEPQ9NPF4 335 aa20.09■□□□□ 0.81
HPS3-204ENST00000462030 THRAP3Q9Y2W1 955 aaKnown RBP20.09■□□□□ 0.81
HPS3-204ENST00000462030 PITPNM2Q9BZ72 1349 aa20.09■□□□□ 0.81
HPS3-204ENST00000462030 MEIS1O00470 390 aa20.09■□□□□ 0.81
HPS3-204ENST00000462030 POU5F1Q01860 360 aaKnown RBP20.09■□□□□ 0.81
HPS3-204ENST00000462030 GIT2Q14161 759 aa20.09■□□□□ 0.81
HPS3-204ENST00000462030 KNOP1Q1ED39 458 aaKnown RBP20.09■□□□□ 0.81
HPS3-204ENST00000462030 BCAS3Q9H6U6 928 aa20.09■□□□□ 0.81
HPS3-204ENST00000462030 ATF5Q9Y2D1 282 aaPredicted RBP20.09■□□□□ 0.81
HPS3-204ENST00000462030 ATP8A1Q9Y2Q0 1164 aa20.09■□□□□ 0.81
HPS3-204ENST00000462030 FGGP02679 453 aa20.08■□□□□ 0.81
HPS3-204ENST00000462030 PLCG2P16885 1265 aa20.08■□□□□ 0.81
HPS3-204ENST00000462030 CHADLQ6NUI6 762 aa20.08■□□□□ 0.81
HPS3-204ENST00000462030 KCTD1Q719H9 257 aa20.08■□□□□ 0.81
HPS3-204ENST00000462030 AMIGO3Q86WK7 504 aa20.08■□□□□ 0.81
HPS3-204ENST00000462030 LNX1Q8TBB1 728 aaPredicted RBP20.08■□□□□ 0.81
HPS3-204ENST00000462030 LMBR1Q8WVP7 490 aa20.08■□□□□ 0.81
HPS3-204ENST00000462030 PSMD1Q99460 953 aa20.08■□□□□ 0.81
HPS3-204ENST00000462030 KCNMB3Q9NPA1 279 aa20.08■□□□□ 0.81
HPS3-204ENST00000462030 GCNT4Q9P109 453 aa20.08■□□□□ 0.81
HPS3-204ENST00000462030 UTP11Q9Y3A2 253 aaKnown RBP20.08■□□□□ 0.81
HPS3-204ENST00000462030 A0A0A6YYK5 440 aaPredicted RBP20.08■□□□□ 0.8
HPS3-204ENST00000462030 IGKV6D-41A0A0C4DH26 115 aa20.08■□□□□ 0.8
HPS3-204ENST00000462030 GFPT2O94808 682 aa20.08■□□□□ 0.8
HPS3-204ENST00000462030 COPB2P35606 906 aa20.08■□□□□ 0.8
HPS3-204ENST00000462030 GALCP54803 685 aa20.08■□□□□ 0.8
HPS3-204ENST00000462030 PABPC4Q13310 644 aaKnown RBP eCLIP20.08■□□□□ 0.8
HPS3-204ENST00000462030 CYB5D1Q6P9G0 228 aa20.08■□□□□ 0.8
HPS3-204ENST00000462030 FUKQ8N0W3 1084 aa20.08■□□□□ 0.8
HPS3-204ENST00000462030 OLIG1Q8TAK6 271 aa20.08■□□□□ 0.8
HPS3-204ENST00000462030 REEP2Q9BRK0 252 aa20.08■□□□□ 0.8
HPS3-204ENST00000462030 FAM114A2Q9NRY5 505 aa20.08■□□□□ 0.8
HPS3-204ENST00000462030 RTCBQ9Y3I0 505 aaKnown RBP20.08■□□□□ 0.8
HPS3-204ENST00000462030 SCTRP47872 440 aa20.07■□□□□ 0.8
HPS3-204ENST00000462030 CDR1P51861 262 aa20.07■□□□□ 0.8
HPS3-204ENST00000462030 GPSM2P81274 684 aa20.07■□□□□ 0.8
HPS3-204ENST00000462030 MFSD14BQ5SR56 506 aa20.07■□□□□ 0.8
HPS3-204ENST00000462030 DCAF12L1Q5VU92 463 aa20.07■□□□□ 0.8
HPS3-204ENST00000462030 EPM2AIP1Q7L775 607 aaPredicted RBP20.07■□□□□ 0.8
HPS3-204ENST00000462030 PTF1AQ7RTS3 328 aa20.07■□□□□ 0.8
HPS3-204ENST00000462030 ADAT2Q7Z6V5 191 aaKnown RBP20.07■□□□□ 0.8
HPS3-204ENST00000462030 CATSPER3Q86XQ3 398 aa20.07■□□□□ 0.8
HPS3-204ENST00000462030 SYCE1Q8N0S2 351 aa20.07■□□□□ 0.8
HPS3-204ENST00000462030 RGL2O15211 777 aa20.07■□□□□ 0.8
HPS3-204ENST00000462030 GNPATO15228 680 aa20.07■□□□□ 0.8
HPS3-204ENST00000462030 BUB1BO60566 1050 aaPredicted RBP20.07■□□□□ 0.8
HPS3-204ENST00000462030 DRD4P21917 467 aa20.07■□□□□ 0.8
HPS3-204ENST00000462030 RDXP35241 583 aaKnown RBP20.07■□□□□ 0.8
HPS3-204ENST00000462030 IFFO1Q0D2I5 559 aa20.07■□□□□ 0.8
HPS3-204ENST00000462030 VPS36Q86VN1 386 aa20.07■□□□□ 0.8
HPS3-204ENST00000462030 FAM228AQ86W67 206 aa20.07■□□□□ 0.8
HPS3-204ENST00000462030 SLC35C1Q96A29 364 aa20.07■□□□□ 0.8
HPS3-204ENST00000462030 TLCD1Q96CP7 247 aa20.07■□□□□ 0.8
HPS3-204ENST00000462030 FMO2Q99518 471 aa20.07■□□□□ 0.8
HPS3-204ENST00000462030 AMFRQ9UKV5 643 aa20.07■□□□□ 0.8
HPS3-204ENST00000462030 PNMA2Q9UL42 364 aa20.07■□□□□ 0.8
HPS3-204ENST00000462030 NRAPQ86VF7 1730 aa20.06■□□□□ 0.8
HPS3-204ENST00000462030 ASTN1O14525 1302 aa20.06■□□□□ 0.8
HPS3-204ENST00000462030 IGSF9BQ9UPX0 1349 aa20.06■□□□□ 0.8
HPS3-204ENST00000462030 FOCADQ5VW36 1801 aa20.06■□□□□ 0.8
HPS3-204ENST00000462030 RSPH10B2B2RC85 870 aa20.06■□□□□ 0.8
HPS3-204ENST00000462030 ZBTB5O15062 677 aa20.06■□□□□ 0.8
HPS3-204ENST00000462030 CLIC2O15247 247 aa20.06■□□□□ 0.8
HPS3-204ENST00000462030 CAND2O75155 1236 aa20.06■□□□□ 0.8
HPS3-204ENST00000462030 RSPH10BP0C881 870 aa20.06■□□□□ 0.8
HPS3-204ENST00000462030 GABPAQ06546 454 aa20.06■□□□□ 0.8
HPS3-204ENST00000462030 CPLX4Q7Z7G2 160 aa20.06■□□□□ 0.8
HPS3-204ENST00000462030 TXLNGYQ9BZA5 131 aa20.06■□□□□ 0.8
HPS3-204ENST00000462030 PPP1R9AQ9ULJ8 1098 aa20.06■□□□□ 0.8
HPS3-204ENST00000462030 F8W031 263 aaPredicted RBP20.05■□□□□ 0.8
HPS3-204ENST00000462030 PPFIA2O75334 1257 aa20.05■□□□□ 0.8
HPS3-204ENST00000462030 TTLL1O95922 423 aa20.05■□□□□ 0.8
HPS3-204ENST00000462030 NR3C1P04150 777 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms