RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 VSIG10LQ86VR7 867 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 FAM178BQ8IXR5 827 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 SYCP3Q8IZU3 236 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 C2orf69Q8N8R5 385 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 DNERQ8NFT8 737 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 SMCR8Q8TEV9 937 aaPredicted RBP7.5□□□□□ -1.21
MSH2-204ENST00000461394 ATP6V0A1Q93050 837 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 IWS1Q96ST2 819 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 MMP19Q99542 508 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 REPIN1Q9BWE0 567 aaKnown RBP7.5□□□□□ -1.21
MSH2-204ENST00000461394 MOV10L1Q9BXT6 1211 aaKnown RBP7.5□□□□□ -1.21
MSH2-204ENST00000461394 FGFBP2Q9BYJ0 223 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 MAF1Q9H063 256 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 PARVGQ9HBI0 331 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 JPH1Q9HDC5 661 aaPredicted RBP7.5□□□□□ -1.21
MSH2-204ENST00000461394 SPTLC3Q9NUV7 552 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 KCND2Q9NZV8 630 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 GABBR1Q9UBS5 961 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 KCNH4Q9UQ05 1017 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 PLXNB2O15031 1838 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 ZNFX1Q9P2E3 1918 aaKnown RBP7.49□□□□□ -1.21
MSH2-204ENST00000461394 CCL15-CCL14A0A0B4J2E2 113 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 FRMD3A2A2Y4 597 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 DHX15O43143 795 aaKnown RBP7.49□□□□□ -1.21
MSH2-204ENST00000461394 ARHGAP6O43182 974 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 ZSCAN12O43309 604 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 ATP9AO75110 1047 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 MFAP3LO75121 409 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 POTEJP0CG39 1038 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 EPB41P11171 864 aaKnown RBP7.49□□□□□ -1.21
MSH2-204ENST00000461394 CETPP11597 493 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 TNNT1P13805 278 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 TRIM21P19474 475 aaKnown RBP7.49□□□□□ -1.21
MSH2-204ENST00000461394 NR2F2P24468 414 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 RPL13P26373 211 aaKnown RBP7.49□□□□□ -1.21
MSH2-204ENST00000461394 NMT1P30419 496 aaKnown RBP7.49□□□□□ -1.21
MSH2-204ENST00000461394 YWHABP31946 246 aaKnown RBP7.49□□□□□ -1.21
MSH2-204ENST00000461394 EHHADHQ08426 723 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 ADAM9Q13443 819 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 SYCP1Q15431 976 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 CCL15Q16663 113 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 KNOP1Q1ED39 458 aaKnown RBP7.49□□□□□ -1.21
MSH2-204ENST00000461394 VWA3BQ502W6 1294 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 FAM102BQ5T8I3 360 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 UTP14CQ5TAP6 766 aaKnown RBP7.49□□□□□ -1.21
MSH2-204ENST00000461394 CEP135Q66GS9 1140 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 PLA2G4FQ68DD2 849 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 C1orf186Q6ZWK4 172 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 OTUD6AQ7L8S5 288 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 APTXQ7Z2E3 356 aaKnown RBP7.49□□□□□ -1.21
MSH2-204ENST00000461394 IRF2BP1Q8IU81 584 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 SMAP1Q8IYB5 467 aaPredicted RBP7.49□□□□□ -1.21
MSH2-204ENST00000461394 CCAR2Q8N163 923 aaKnown RBP7.49□□□□□ -1.21
MSH2-204ENST00000461394 ZNF397Q8NF99 534 aaPredicted RBP7.49□□□□□ -1.21
MSH2-204ENST00000461394 RDM1Q8NG50 284 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 ZNF526Q8TF50 670 aaPredicted RBP7.49□□□□□ -1.21
MSH2-204ENST00000461394 GTF3C2Q8WUA4 911 aaPredicted RBP7.49□□□□□ -1.21
MSH2-204ENST00000461394 SCFD1Q8WVM8 642 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 CCDC51Q96ER9 411 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 CEP63Q96MT8 703 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 PANX2Q96RD6 677 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 NUP58Q9BVL2 599 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 TMUB1Q9BVT8 246 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 NAA15Q9BXJ9 866 aaKnown RBP7.49□□□□□ -1.21
MSH2-204ENST00000461394 MMRN2Q9H8L6 949 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 GBA2Q9HCG7 927 aaPredicted RBP7.49□□□□□ -1.21
MSH2-204ENST00000461394 ZNHIT6Q9NWK9 470 aaKnown RBP7.49□□□□□ -1.21
MSH2-204ENST00000461394 WRAP73Q9P2S5 460 aaPredicted RBP7.49□□□□□ -1.21
MSH2-204ENST00000461394 SEL1LQ9UBV2 794 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 SLC9A2Q9UBY0 812 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 SEPT9Q9UHD8 586 aaPredicted RBP7.49□□□□□ -1.21
MSH2-204ENST00000461394 DBR1Q9UK59 544 aaKnown RBP7.49□□□□□ -1.21
MSH2-204ENST00000461394 ODF2LQ9ULJ1 636 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 PCDHA10Q9Y5I2 948 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 NFASCO94856 1347 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 UBE4BO95155 1302 aa7.49□□□□□ -1.21
MSH2-204ENST00000461394 A0A1W2PQC6 194 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 LRRC10BA6NIK2 292 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 LRRC37A2A6NM11 1700 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 USP27XA6NNY8 438 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 CLIC2O15247 247 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 EIF3DO15371 548 aaKnown RBP eCLIP7.48□□□□□ -1.21
MSH2-204ENST00000461394 STX10O60499 249 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 EIF3JO75822 258 aaKnown RBP7.48□□□□□ -1.21
MSH2-204ENST00000461394 CELF2O95319 508 aaKnown RBP7.48□□□□□ -1.21
MSH2-204ENST00000461394 CCNE2O96020 404 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 NR3C1P04150 777 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 GUCY2CP25092 1073 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 SSTR3P32745 418 aaPredicted RBP7.48□□□□□ -1.21
MSH2-204ENST00000461394 KRT9P35527 623 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 PBX1P40424 430 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 CASP5P51878 434 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 GTF2A2P52657 109 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 CCNA1P78396 465 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 UGCGQ16739 394 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 EDRF1Q3B7T1 1238 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 DCAF17Q5H9S7 520 aaPredicted RBP7.48□□□□□ -1.21
MSH2-204ENST00000461394 LDLRAD1Q5T700 205 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 TCERG1LQ5VWI1 586 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 SWSAP1Q6NVH7 229 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms