RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 PRAMEF22A3QJZ6 481 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 H2AFYO75367 372 aaKnown RBP4.12□□□□□ -1.75
VCL-203ENST00000461383 FAHP16930 419 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 HERVK_113P62684 666 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 PRR5P85299 388 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 TCIRG1Q13488 830 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 PDCD1Q15116 288 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 UGT8Q16880 541 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 CATSPEREQ5SY80 951 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 PRAMEF18Q5VWM3 479 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 OLFML2BQ68BL8 750 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 CXorf57Q6NSI4 855 aaKnown RBP4.12□□□□□ -1.75
VCL-203ENST00000461383 PPP4R4Q6NUP7 873 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 CCDC62Q6P9F0 684 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 ZC3H14Q6PJT7 736 aaKnown RBP4.12□□□□□ -1.75
VCL-203ENST00000461383 CXorf67Q86X51 503 aaPredicted RBP4.12□□□□□ -1.75
VCL-203ENST00000461383 ZSWIM9Q86XI8 627 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 TPH2Q8IWU9 490 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 TCEAL8Q8IYN2 117 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 CPA6Q8N4T0 437 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 TTLL11Q8NHH1 800 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 TTC8Q8TAM2 541 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 LMBR1Q8WVP7 490 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 ASB15Q8WXK1 588 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 ALG3Q92685 438 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 HSPBAP1Q96EW2 488 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 TOE1Q96GM8 510 aaKnown RBP4.12□□□□□ -1.75
VCL-203ENST00000461383 KIRREL1Q96J84 757 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 FAM84AQ96KN4 292 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 C16orf92Q96LL3 132 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 LRGUKQ96M69 825 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 QRSL1Q9H0R6 528 aaKnown RBP4.12□□□□□ -1.75
VCL-203ENST00000461383 SLC6A17Q9H1V8 727 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 POFUT1Q9H488 388 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 FAM53CQ9NYF3 392 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 DTLQ9NZJ0 730 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 PNMA8BQ9ULN7 279 aaPredicted RBP4.12□□□□□ -1.75
VCL-203ENST00000461383 YBX2Q9Y2T7 364 aaKnown RBP4.12□□□□□ -1.75
VCL-203ENST00000461383 ASB1Q9Y576 335 aa4.12□□□□□ -1.75
VCL-203ENST00000461383 OR14I1A6ND48 311 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 TRIM75PA6NK02 468 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 RASSF10A6NK89 507 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.11□□□□□ -1.75
VCL-203ENST00000461383 ACOT7O00154 380 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 MAP4K4O95819 1239 aaPredicted RBP4.11□□□□□ -1.75
VCL-203ENST00000461383 EFEMP2O95967 443 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 CLEC2LP0C7M8 214 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 MTHFD2P13995 350 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 ENPP1P22413 925 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 CYP2C19P33261 490 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 GPR3P46089 330 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 ERVFRD-1P60508 538 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 KRT85P78386 507 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 SRSF2Q01130 221 aaKnown RBP4.11□□□□□ -1.75
VCL-203ENST00000461383 SLC6A3Q01959 620 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 ROM1Q03395 351 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 ZNF124Q15973 351 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 FSCN1Q16658 493 aaKnown RBP4.11□□□□□ -1.75
VCL-203ENST00000461383 MINDY4Q4G0A6 757 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 CT83Q5H943 113 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 TOR2AQ5JU69 321 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 TMEM240Q5SV17 173 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 NXNQ6DKJ4 435 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 CCSAPQ6IQ19 270 aaPredicted RBP4.11□□□□□ -1.75
VCL-203ENST00000461383 RPTNQ6XPR3 784 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 ETV3LQ6ZN32 361 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 ZC3H18Q86VM9 953 aaKnown RBP4.11□□□□□ -1.75
VCL-203ENST00000461383 MAGEB6Q8N7X4 407 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 CALML6Q8TD86 181 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 RPGRQ92834 1020 aaKnown RBP4.11□□□□□ -1.75
VCL-203ENST00000461383 SHISA4Q96DD7 197 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 CLIP3Q96DZ5 547 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 INTS4Q96HW7 963 aaKnown RBP4.11□□□□□ -1.75
VCL-203ENST00000461383 ZNF496Q96IT1 587 aaPredicted RBP4.11□□□□□ -1.75
VCL-203ENST00000461383 PSMD1Q99460 953 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 BCAS3Q9H6U6 928 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 UCKL1Q9NWZ5 548 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.11□□□□□ -1.75
VCL-203ENST00000461383 RCAN3Q9UKA8 241 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 EDARQ9UNE0 448 aa4.11□□□□□ -1.75
VCL-203ENST00000461383 ZNF503-AS2A6NEH8 195 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 ABLIM1O14639 778 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 MAFGO15525 162 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 PRPF6O94906 941 aaKnown RBP4.1□□□□□ -1.75
VCL-203ENST00000461383 TSPAN15O95858 294 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 OSMP13725 252 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 PTGS1P23219 599 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 GNALP38405 381 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 MAPKAPK2P49137 400 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 MANFP55145 182 aaKnown RBP4.1□□□□□ -1.75
VCL-203ENST00000461383 NKX3-2P78367 333 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 ADCY2Q08462 1091 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 DBPQ10586 325 aaPredicted RBP4.1□□□□□ -1.75
VCL-203ENST00000461383 HLTFQ14527 1009 aaKnown RBP eCLIP4.1□□□□□ -1.75
VCL-203ENST00000461383 PKN1Q16512 942 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.1□□□□□ -1.75
VCL-203ENST00000461383 SLFN12LQ6IEE8 588 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 KSR2Q6VAB6 950 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 AMIGO3Q86WK7 504 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 FAM126BQ8IXS8 530 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms