RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 FCER1AP12319 257 aa12.31□□□□□ -0.44
COPS7B-217ENST00000461350 DSG3P32926 999 aa12.31□□□□□ -0.44
COPS7B-217ENST00000461350 IRAK1P51617 712 aa12.31□□□□□ -0.44
COPS7B-217ENST00000461350 IRX3P78415 501 aaPredicted RBP12.31□□□□□ -0.44
COPS7B-217ENST00000461350 CEP55Q53EZ4 464 aa12.31□□□□□ -0.44
COPS7B-217ENST00000461350 GPIHBP1Q8IV16 184 aa12.31□□□□□ -0.44
COPS7B-217ENST00000461350 BCAS4Q8TDM0 211 aa12.31□□□□□ -0.44
COPS7B-217ENST00000461350 CAPS2Q9BXY5 557 aa12.31□□□□□ -0.44
COPS7B-217ENST00000461350 DEF6Q9H4E7 631 aa12.31□□□□□ -0.44
COPS7B-217ENST00000461350 VAV3Q9UKW4 847 aa12.31□□□□□ -0.44
COPS7B-217ENST00000461350 CLEC11AQ9Y240 323 aa12.31□□□□□ -0.44
COPS7B-217ENST00000461350 IREB2P48200 963 aaKnown RBP12.31□□□□□ -0.44
COPS7B-217ENST00000461350 ZBED6P86452 979 aa12.31□□□□□ -0.44
COPS7B-217ENST00000461350 PDE4DQ08499 809 aa12.31□□□□□ -0.44
COPS7B-217ENST00000461350 MEA1Q16626 185 aa12.31□□□□□ -0.44
COPS7B-217ENST00000461350 FKBP15Q5T1M5 1219 aa12.31□□□□□ -0.44
COPS7B-217ENST00000461350 REPS2Q8NFH8 660 aa12.31□□□□□ -0.44
COPS7B-217ENST00000461350 ZNF408Q9H9D4 720 aa12.31□□□□□ -0.44
COPS7B-217ENST00000461350 RGL1Q9NZL6 768 aa12.31□□□□□ -0.44
COPS7B-217ENST00000461350 STK17AQ9UEE5 414 aa12.31□□□□□ -0.44
COPS7B-217ENST00000461350 ZNF214Q9UL59 606 aaPredicted RBP12.31□□□□□ -0.44
COPS7B-217ENST00000461350 DDX39AO00148 427 aaKnown RBP12.3□□□□□ -0.44
COPS7B-217ENST00000461350 TACC1O75410 805 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 ITGB5P18084 799 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 PSMC6P62333 389 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 GNGT1P63211 74 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 SLC7A5Q01650 507 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 CACNB1Q02641 598 aaPredicted RBP12.3□□□□□ -0.44
COPS7B-217ENST00000461350 STK4Q13043 487 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 CCDC181Q5TID7 509 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 GADL1Q6ZQY3 521 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 CATSPER3Q86XQ3 398 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 MCF2L2Q86YR7 1114 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 CCDC170Q8IYT3 715 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 HDAC7Q8WUI4 952 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 FAM20AQ96MK3 541 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 C7orf25Q9BPX7 421 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 LRRC1Q9BTT6 524 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 NUP58Q9BVL2 599 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 PTPRFP10586 1907 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 NPHP3-ACAD11A0A0J9YXS1 232 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 SPDYE16A6NNV3 312 aaPredicted RBP12.3□□□□□ -0.44
COPS7B-217ENST00000461350 TRAF5O00463 557 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 TBX3O15119 743 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 USO1O60763 962 aaKnown RBP12.3□□□□□ -0.44
COPS7B-217ENST00000461350 VAV2P52735 878 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 PPFIA1Q13136 1202 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 BAATQ14032 418 aaPredicted RBP12.3□□□□□ -0.44
COPS7B-217ENST00000461350 LRCH2Q5VUJ6 765 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 MAP1SQ66K74 1059 aaPredicted RBP12.3□□□□□ -0.44
COPS7B-217ENST00000461350 RNF207Q6ZRF8 634 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 NOC4LQ9BVI4 516 aaKnown RBP12.3□□□□□ -0.44
COPS7B-217ENST00000461350 WDR11Q9BZH6 1224 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 EHMT1Q9H9B1 1298 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 MAGEF1Q9HAY2 307 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 DMGDHQ9UI17 866 aaKnown RBP12.3□□□□□ -0.44
COPS7B-217ENST00000461350 WDR90Q96KV7 1748 aa12.3□□□□□ -0.44
COPS7B-217ENST00000461350 ERLIN2O94905 339 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 RHOBTB3O94955 611 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 MYCLP12524 364 aaPredicted RBP12.29□□□□□ -0.44
COPS7B-217ENST00000461350 AMPD3Q01432 767 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 TRIM58Q8NG06 486 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 AENQ8WTP8 325 aaKnown RBP12.29□□□□□ -0.44
COPS7B-217ENST00000461350 DDX12PQ92771 950 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 CNOT6LQ96LI5 555 aaKnown RBP12.29□□□□□ -0.44
COPS7B-217ENST00000461350 IFIH1Q9BYX4 1025 aaKnown RBP12.29□□□□□ -0.44
COPS7B-217ENST00000461350 SHOX2O60902 331 aaPredicted RBP12.29□□□□□ -0.44
COPS7B-217ENST00000461350 PLEKP08567 350 aaPredicted RBP12.29□□□□□ -0.44
COPS7B-217ENST00000461350 SPATA31C1P0DKV0 1188 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 CXCR5P32302 372 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 NF2P35240 595 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 TTI2Q6NXR4 508 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 CCDC47Q96A33 483 aaKnown RBP12.29□□□□□ -0.44
COPS7B-217ENST00000461350 ZNF577Q9BSK1 485 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 TSGA10Q9BZW7 698 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 MLXIPQ9HAP2 919 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 POLD4Q9HCU8 107 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 SLC39A2Q9NP94 309 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 SNX12Q9UMY4 172 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 FAM169AQ9Y6X4 670 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 OPA1O60313 960 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 MRPS9P82933 396 aaKnown RBP12.29□□□□□ -0.44
COPS7B-217ENST00000461350 KCNB1Q14721 858 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 ZNF662Q6ZS27 426 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 RETREG2Q8NC44 543 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 NOC3LQ8WTT2 800 aaKnown RBP12.29□□□□□ -0.44
COPS7B-217ENST00000461350 RMDN3Q96TC7 470 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 SMARCAL1Q9NZC9 954 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 CAPN6Q9Y6Q1 641 aa12.29□□□□□ -0.44
COPS7B-217ENST00000461350 KDM3AQ9Y4C1 1321 aa12.28□□□□□ -0.44
COPS7B-217ENST00000461350 GAS7O60861 476 aa12.28□□□□□ -0.44
COPS7B-217ENST00000461350 MOCS3O95396 460 aa12.28□□□□□ -0.44
COPS7B-217ENST00000461350 MYL1P05976 194 aa12.28□□□□□ -0.44
COPS7B-217ENST00000461350 PLA2G4BP0C869 781 aa12.28□□□□□ -0.44
COPS7B-217ENST00000461350 PABPC4Q13310 644 aaKnown RBP eCLIP12.28□□□□□ -0.44
COPS7B-217ENST00000461350 CTTNQ14247 550 aaKnown RBP12.28□□□□□ -0.44
COPS7B-217ENST00000461350 OTOP1Q7RTM1 612 aa12.28□□□□□ -0.44
COPS7B-217ENST00000461350 GIMAP8Q8ND71 665 aaPredicted RBP12.28□□□□□ -0.44
COPS7B-217ENST00000461350 GLIS3Q8NEA6 775 aa12.28□□□□□ -0.44
COPS7B-217ENST00000461350 RBM46Q8TBY0 533 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms