RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 IDEP14735 1019 aa12.11□□□□□ -0.47
CSDC2-202ENST00000460790 ELNP15502 786 aa12.11□□□□□ -0.47
CSDC2-202ENST00000460790 GUCY2CP25092 1073 aa12.11□□□□□ -0.47
CSDC2-202ENST00000460790 NPEPPSP55786 919 aa12.11□□□□□ -0.47
CSDC2-202ENST00000460790 TRIM32Q13049 653 aa12.11□□□□□ -0.47
CSDC2-202ENST00000460790 PSMD2Q13200 908 aa12.11□□□□□ -0.47
CSDC2-202ENST00000460790 DPCR1Q3MIW9 517 aa12.11□□□□□ -0.47
CSDC2-202ENST00000460790 CT47A1Q5JQC4 288 aaPredicted RBP12.11□□□□□ -0.47
CSDC2-202ENST00000460790 PLA2G4FQ68DD2 849 aa12.11□□□□□ -0.47
CSDC2-202ENST00000460790 C11orf57Q6ZUT1 292 aaPredicted RBP12.11□□□□□ -0.47
CSDC2-202ENST00000460790 TRMT1LQ7Z2T5 733 aaKnown RBP12.11□□□□□ -0.47
CSDC2-202ENST00000460790 TLK2Q86UE8 772 aa12.11□□□□□ -0.47
CSDC2-202ENST00000460790 CCDC65Q8IXS2 484 aa12.11□□□□□ -0.47
CSDC2-202ENST00000460790 GLG1Q92896 1179 aa12.11□□□□□ -0.47
CSDC2-202ENST00000460790 FAM167AQ96KS9 214 aa12.11□□□□□ -0.47
CSDC2-202ENST00000460790 CEP170P1Q96L14 293 aa12.11□□□□□ -0.47
CSDC2-202ENST00000460790 REEP2Q9BRK0 252 aa12.11□□□□□ -0.47
CSDC2-202ENST00000460790 RBSNQ9H1K0 784 aa12.11□□□□□ -0.47
CSDC2-202ENST00000460790 PDLIM7Q9NR12 457 aa12.11□□□□□ -0.47
CSDC2-202ENST00000460790 CYP26B1Q9NR63 512 aa12.11□□□□□ -0.47
CSDC2-202ENST00000460790 EXOC1Q9NV70 894 aa12.11□□□□□ -0.47
CSDC2-202ENST00000460790 PPP1R3GB7ZBB8 358 aa12.1□□□□□ -0.47
CSDC2-202ENST00000460790 SEPT4O43236 478 aa12.1□□□□□ -0.47
CSDC2-202ENST00000460790 HMGCRP04035 888 aa12.1□□□□□ -0.47
CSDC2-202ENST00000460790 LGALS2P05162 132 aa12.1□□□□□ -0.47
CSDC2-202ENST00000460790 ZNF165P49910 485 aa12.1□□□□□ -0.47
CSDC2-202ENST00000460790 RAD51AP2Q09MP3 1159 aa12.1□□□□□ -0.47
CSDC2-202ENST00000460790 COASYQ13057 564 aa12.1□□□□□ -0.47
CSDC2-202ENST00000460790 PLCB4Q15147 1175 aa12.1□□□□□ -0.47
CSDC2-202ENST00000460790 TARBP2Q15633 366 aaKnown RBP12.1□□□□□ -0.47
CSDC2-202ENST00000460790 DGKDQ16760 1214 aa12.1□□□□□ -0.47
CSDC2-202ENST00000460790 MAP3K21Q5TCX8 1036 aa12.1□□□□□ -0.47
CSDC2-202ENST00000460790 FAM200AQ8TCP9 573 aa12.1□□□□□ -0.47
CSDC2-202ENST00000460790 ATP8B4Q8TF62 1192 aa12.1□□□□□ -0.47
CSDC2-202ENST00000460790 BBXQ8WY36 941 aaPredicted RBP12.1□□□□□ -0.47
CSDC2-202ENST00000460790 CEP89Q96ST8 783 aa12.1□□□□□ -0.47
CSDC2-202ENST00000460790 SH2D3AQ9BRG2 576 aa12.1□□□□□ -0.47
CSDC2-202ENST00000460790 C16orf70Q9BSU1 422 aa12.1□□□□□ -0.47
CSDC2-202ENST00000460790 TIPINQ9BVW5 301 aa12.1□□□□□ -0.47
CSDC2-202ENST00000460790 NAT10Q9H0A0 1025 aaKnown RBP12.1□□□□□ -0.47
CSDC2-202ENST00000460790 AP5M1Q9H0R1 490 aa12.1□□□□□ -0.47
CSDC2-202ENST00000460790 ERAP1Q9NZ08 941 aa12.1□□□□□ -0.47
CSDC2-202ENST00000460790 SEPT9Q9UHD8 586 aaPredicted RBP12.1□□□□□ -0.47
CSDC2-202ENST00000460790 ODF2LQ9ULJ1 636 aa12.1□□□□□ -0.47
CSDC2-202ENST00000460790 PPME1Q9Y570 386 aa12.1□□□□□ -0.47
CSDC2-202ENST00000460790 PCDHA2Q9Y5H9 948 aa12.1□□□□□ -0.47
CSDC2-202ENST00000460790 GOLGA6L3A6NEY3 463 aa12.09□□□□□ -0.47
CSDC2-202ENST00000460790 RSPH10B2B2RC85 870 aa12.09□□□□□ -0.47
CSDC2-202ENST00000460790 HBP1O60381 514 aa12.09□□□□□ -0.47
CSDC2-202ENST00000460790 DGAT1O75907 488 aa12.09□□□□□ -0.47
CSDC2-202ENST00000460790 RSPH10BP0C881 870 aa12.09□□□□□ -0.47
CSDC2-202ENST00000460790 GAP43P17677 238 aa12.09□□□□□ -0.47
CSDC2-202ENST00000460790 ZNF131P52739 623 aa12.09□□□□□ -0.47
CSDC2-202ENST00000460790 NKX3-2P78367 333 aa12.09□□□□□ -0.47
CSDC2-202ENST00000460790 CACNB1Q02641 598 aaPredicted RBP12.09□□□□□ -0.47
CSDC2-202ENST00000460790 STK4Q13043 487 aa12.09□□□□□ -0.47
CSDC2-202ENST00000460790 COBLL1Q53SF7 1204 aa12.09□□□□□ -0.47
CSDC2-202ENST00000460790 HERC4Q5GLZ8 1057 aaPredicted RBP12.09□□□□□ -0.47
CSDC2-202ENST00000460790 TRIM50Q86XT4 487 aa12.09□□□□□ -0.47
CSDC2-202ENST00000460790 SLAIN1Q8ND83 568 aa12.09□□□□□ -0.47
CSDC2-202ENST00000460790 LENG1Q96BZ8 264 aaPredicted RBP12.09□□□□□ -0.47
CSDC2-202ENST00000460790 CCDC43Q96MW1 224 aaKnown RBP12.09□□□□□ -0.47
CSDC2-202ENST00000460790 BPIFA3Q9BQP9 254 aa12.09□□□□□ -0.47
CSDC2-202ENST00000460790 RNPEPQ9H4A4 650 aa12.09□□□□□ -0.47
CSDC2-202ENST00000460790 POLD4Q9HCU8 107 aa12.09□□□□□ -0.47
CSDC2-202ENST00000460790 DACH1Q9UI36 760 aa12.09□□□□□ -0.47
CSDC2-202ENST00000460790 GDAQ9Y2T3 454 aa12.09□□□□□ -0.47
CSDC2-202ENST00000460790 TRIM17Q9Y577 477 aa12.09□□□□□ -0.47
CSDC2-202ENST00000460790 COL4A3BPQ9Y5P4 624 aa12.09□□□□□ -0.47
CSDC2-202ENST00000460790 SFI1A8K8P3 1242 aa12.08□□□□□ -0.48
CSDC2-202ENST00000460790 H3BRB1 525 aa12.08□□□□□ -0.48
CSDC2-202ENST00000460790 USO1O60763 962 aaKnown RBP12.08□□□□□ -0.48
CSDC2-202ENST00000460790 HIP1RO75146 1068 aa12.08□□□□□ -0.48
CSDC2-202ENST00000460790 TBCAO75347 108 aaKnown RBP12.08□□□□□ -0.48
CSDC2-202ENST00000460790 FAM13AO94988 1023 aa12.08□□□□□ -0.48
CSDC2-202ENST00000460790 PRKAR2AP13861 404 aaKnown RBP12.08□□□□□ -0.48
CSDC2-202ENST00000460790 CD44P16070 742 aaKnown RBP12.08□□□□□ -0.48
CSDC2-202ENST00000460790 MARK3P27448 753 aa12.08□□□□□ -0.48
CSDC2-202ENST00000460790 ERCC5P28715 1186 aaPredicted RBP12.08□□□□□ -0.48
CSDC2-202ENST00000460790 CNGA1P29973 690 aa12.08□□□□□ -0.48
CSDC2-202ENST00000460790 CCND3P30281 292 aaPredicted RBP12.08□□□□□ -0.48
CSDC2-202ENST00000460790 PRCPP42785 496 aa12.08□□□□□ -0.48
CSDC2-202ENST00000460790 CPT1AP50416 773 aa12.08□□□□□ -0.48
CSDC2-202ENST00000460790 GJA9P57773 515 aa12.08□□□□□ -0.48
CSDC2-202ENST00000460790 MAPK7Q13164 816 aa12.08□□□□□ -0.48
CSDC2-202ENST00000460790 IQCB1Q15051 598 aa12.08□□□□□ -0.48
CSDC2-202ENST00000460790 MTERF2Q49AM1 385 aa12.08□□□□□ -0.48
CSDC2-202ENST00000460790 BRDTQ58F21 947 aaPredicted RBP12.08□□□□□ -0.48
CSDC2-202ENST00000460790 SMYD4Q8IYR2 804 aaPredicted RBP12.08□□□□□ -0.48
CSDC2-202ENST00000460790 DAW1Q8N136 415 aa12.08□□□□□ -0.48
CSDC2-202ENST00000460790 ADSSL1Q8N142 457 aa12.08□□□□□ -0.48
CSDC2-202ENST00000460790 KIAA0895Q8NCT3 520 aa12.08□□□□□ -0.48
CSDC2-202ENST00000460790 HPS3Q969F9 1004 aa12.08□□□□□ -0.48
CSDC2-202ENST00000460790 UPF3AQ9H1J1 476 aaKnown RBP12.08□□□□□ -0.48
CSDC2-202ENST00000460790 ZHX3Q9H4I2 956 aa12.08□□□□□ -0.48
CSDC2-202ENST00000460790 TUT1Q9H6E5 874 aaKnown RBP12.08□□□□□ -0.48
CSDC2-202ENST00000460790 DHX33Q9H6R0 707 aaKnown RBP12.08□□□□□ -0.48
CSDC2-202ENST00000460790 PARVGQ9HBI0 331 aa12.08□□□□□ -0.48
CSDC2-202ENST00000460790 CBX8Q9HC52 389 aa12.08□□□□□ -0.48
CSDC2-202ENST00000460790 SLC39A2Q9NP94 309 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms