RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 AIPL1Q9NZN9 384 aa16.87■□□□□ 0.29
SSR4-206ENST00000460616 MINPP1Q9UNW1 487 aa16.87■□□□□ 0.29
SSR4-206ENST00000460616 TSPY2A6NKD2 308 aa16.86■□□□□ 0.29
SSR4-206ENST00000460616 POLD1P28340 1107 aa16.86■□□□□ 0.29
SSR4-206ENST00000460616 HOXA10P31260 410 aaPredicted RBP16.86■□□□□ 0.29
SSR4-206ENST00000460616 ASIC2Q16515 512 aa16.86■□□□□ 0.29
SSR4-206ENST00000460616 LRRC34Q8IZ02 419 aa16.86■□□□□ 0.29
SSR4-206ENST00000460616 SEC14L1Q92503 715 aa16.86■□□□□ 0.29
SSR4-206ENST00000460616 SELENOSQ9BQE4 189 aa16.86■□□□□ 0.29
SSR4-206ENST00000460616 PPP1R1BQ9UD71 204 aaPredicted RBP16.86■□□□□ 0.29
SSR4-206ENST00000460616 LRRC37AA6NMS7 1700 aa16.86■□□□□ 0.29
SSR4-206ENST00000460616 ARAP2Q8WZ64 1704 aa16.86■□□□□ 0.29
SSR4-206ENST00000460616 PPFIA2O75334 1257 aa16.86■□□□□ 0.29
SSR4-206ENST00000460616 FKBP3Q00688 224 aaKnown RBP16.86■□□□□ 0.29
SSR4-206ENST00000460616 BIRC2Q13490 618 aa16.86■□□□□ 0.29
SSR4-206ENST00000460616 C10orf76Q5T2E6 689 aa16.86■□□□□ 0.29
SSR4-206ENST00000460616 CAPRIN2Q6IMN6 1127 aaKnown RBP16.86■□□□□ 0.29
SSR4-206ENST00000460616 LRRC57Q8N9N7 239 aa16.86■□□□□ 0.29
SSR4-206ENST00000460616 SAAL1Q96ER3 474 aa16.86■□□□□ 0.29
SSR4-206ENST00000460616 CELF4Q9BZC1 486 aaKnown RBP16.86■□□□□ 0.29
SSR4-206ENST00000460616 TRAF5O00463 557 aa16.85■□□□□ 0.29
SSR4-206ENST00000460616 ATXN2LQ8WWM7 1075 aaKnown RBP16.85■□□□□ 0.29
SSR4-206ENST00000460616 BLOC1S4Q9NUP1 217 aa16.85■□□□□ 0.29
SSR4-206ENST00000460616 DIAPH2O60879 1101 aa16.85■□□□□ 0.29
SSR4-206ENST00000460616 VIMP08670 466 aaKnown RBP16.85■□□□□ 0.29
SSR4-206ENST00000460616 NPR1P16066 1061 aa16.85■□□□□ 0.29
SSR4-206ENST00000460616 MMP13P45452 471 aa16.85■□□□□ 0.29
SSR4-206ENST00000460616 GLIS3Q8NEA6 775 aa16.85■□□□□ 0.29
SSR4-206ENST00000460616 ZNF570Q96NI8 536 aa16.85■□□□□ 0.29
SSR4-206ENST00000460616 FMO2Q99518 471 aa16.85■□□□□ 0.29
SSR4-206ENST00000460616 KCNMB3Q9NPA1 279 aa16.85■□□□□ 0.29
SSR4-206ENST00000460616 BARHL2Q9NY43 387 aa16.85■□□□□ 0.29
SSR4-206ENST00000460616 AGAP1Q9UPQ3 857 aa16.85■□□□□ 0.29
SSR4-206ENST00000460616 ALADP13716 330 aa16.84■□□□□ 0.29
SSR4-206ENST00000460616 NQO1P15559 274 aaKnown RBP16.84■□□□□ 0.29
SSR4-206ENST00000460616 PEX19P40855 299 aa16.84■□□□□ 0.29
SSR4-206ENST00000460616 ICA1Q05084 483 aa16.84■□□□□ 0.29
SSR4-206ENST00000460616 SPDYCQ5MJ68 293 aa16.84■□□□□ 0.29
SSR4-206ENST00000460616 CDCA2Q69YH5 1023 aaPredicted RBP16.84■□□□□ 0.29
SSR4-206ENST00000460616 PEX26Q7Z412 305 aa16.84■□□□□ 0.29
SSR4-206ENST00000460616 LARP4BQ92615 738 aaKnown RBP16.84■□□□□ 0.29
SSR4-206ENST00000460616 TRIM31Q9BZY9 425 aa16.84■□□□□ 0.29
SSR4-206ENST00000460616 UTRNP46939 3433 aa16.84■□□□□ 0.29
SSR4-206ENST00000460616 TLDC2A0PJX2 215 aa16.84■□□□□ 0.29
SSR4-206ENST00000460616 H0YIN7 160 aa16.84■□□□□ 0.29
SSR4-206ENST00000460616 STXBP3O00186 592 aa16.84■□□□□ 0.29
SSR4-206ENST00000460616 SHBGP04278 402 aa16.84■□□□□ 0.29
SSR4-206ENST00000460616 ZBTB48P10074 688 aaPredicted RBP16.84■□□□□ 0.29
SSR4-206ENST00000460616 CCND1P24385 295 aa16.84■□□□□ 0.29
SSR4-206ENST00000460616 KCNJ2P63252 427 aa16.84■□□□□ 0.29
SSR4-206ENST00000460616 PTK2Q05397 1052 aa16.84■□□□□ 0.29
SSR4-206ENST00000460616 PSMD2Q13200 908 aa16.84■□□□□ 0.29
SSR4-206ENST00000460616 GRB10Q13322 594 aa16.84■□□□□ 0.29
SSR4-206ENST00000460616 MICAL1Q8TDZ2 1067 aa16.84■□□□□ 0.29
SSR4-206ENST00000460616 MASTLQ96GX5 879 aa16.84■□□□□ 0.29
SSR4-206ENST00000460616 CRAMP1Q96RY5 1269 aa16.84■□□□□ 0.29
SSR4-206ENST00000460616 PRMT1Q99873 361 aaKnown RBP16.84■□□□□ 0.29
SSR4-206ENST00000460616 INTS9Q9NV88 658 aaKnown RBP16.84■□□□□ 0.29
SSR4-206ENST00000460616 ZNF219Q9P2Y4 722 aaPredicted RBP16.84■□□□□ 0.29
SSR4-206ENST00000460616 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.84■□□□□ 0.29
SSR4-206ENST00000460616 LTBP1Q14766 1721 aa16.83■□□□□ 0.29
SSR4-206ENST00000460616 BRCA1P38398 1863 aaKnown RBP16.83■□□□□ 0.29
SSR4-206ENST00000460616 TXKP42681 527 aa16.83■□□□□ 0.28
SSR4-206ENST00000460616 MYOCDQ8IZQ8 938 aa16.83■□□□□ 0.28
SSR4-206ENST00000460616 RASGEF1CQ8N431 466 aa16.83■□□□□ 0.28
SSR4-206ENST00000460616 PNMA1Q8ND90 353 aa16.83■□□□□ 0.28
SSR4-206ENST00000460616 PGM2Q96G03 612 aa16.83■□□□□ 0.28
SSR4-206ENST00000460616 CDK5RAP3Q96JB5 506 aa16.83■□□□□ 0.28
SSR4-206ENST00000460616 TXLNGYQ9BZA5 131 aa16.83■□□□□ 0.28
SSR4-206ENST00000460616 ADAM7Q9H2U9 754 aa16.83■□□□□ 0.28
SSR4-206ENST00000460616 GOPCQ9HD26 462 aa16.83■□□□□ 0.28
SSR4-206ENST00000460616 ABCF3Q9NUQ8 709 aa16.83■□□□□ 0.28
SSR4-206ENST00000460616 STK17AQ9UEE5 414 aa16.83■□□□□ 0.28
SSR4-206ENST00000460616 CCDC169A6NNP5 214 aa16.82■□□□□ 0.28
SSR4-206ENST00000460616 SMNDC1O75940 238 aaKnown RBP eCLIP16.82■□□□□ 0.28
SSR4-206ENST00000460616 DPEP1P16444 411 aa16.82■□□□□ 0.28
SSR4-206ENST00000460616 KLRK1P26718 216 aa16.82■□□□□ 0.28
SSR4-206ENST00000460616 CDC25CP30307 473 aa16.82■□□□□ 0.28
SSR4-206ENST00000460616 GNAQP50148 359 aa16.82■□□□□ 0.28
SSR4-206ENST00000460616 NONOQ15233 471 aaKnown RBP eCLIP16.82■□□□□ 0.28
SSR4-206ENST00000460616 MIS18BP1Q6P0N0 1132 aa16.82■□□□□ 0.28
SSR4-206ENST00000460616 TPCN2Q8NHX9 752 aa16.82■□□□□ 0.28
SSR4-206ENST00000460616 GPR101Q96P66 508 aaPredicted RBP16.82■□□□□ 0.28
SSR4-206ENST00000460616 SH3GL3Q99963 347 aa16.82■□□□□ 0.28
SSR4-206ENST00000460616 KANSL2Q9H9L4 492 aa16.82■□□□□ 0.28
SSR4-206ENST00000460616 EME2A4GXA9 379 aaPredicted RBP16.82■□□□□ 0.28
SSR4-206ENST00000460616 PPEF1O14829 653 aaPredicted RBP16.82■□□□□ 0.28
SSR4-206ENST00000460616 FOXR2Q6PJQ5 311 aa16.82■□□□□ 0.28
SSR4-206ENST00000460616 ZNF571Q7Z3V5 609 aaPredicted RBP16.82■□□□□ 0.28
SSR4-206ENST00000460616 KRT25Q7Z3Z0 450 aa16.82■□□□□ 0.28
SSR4-206ENST00000460616 DNAAF5Q86Y56 855 aa16.82■□□□□ 0.28
SSR4-206ENST00000460616 DDX12PQ92771 950 aa16.82■□□□□ 0.28
SSR4-206ENST00000460616 HOMER3Q9NSC5 361 aa16.82■□□□□ 0.28
SSR4-206ENST00000460616 MAD2L2Q9UI95 211 aa16.82■□□□□ 0.28
SSR4-206ENST00000460616 UBOX5O94941 541 aa16.81■□□□□ 0.28
SSR4-206ENST00000460616 NUDT17P0C025 328 aa16.81■□□□□ 0.28
SSR4-206ENST00000460616 KCNA3P22001 575 aa16.81■□□□□ 0.28
SSR4-206ENST00000460616 ALDH5A1P51649 535 aaPredicted RBP16.81■□□□□ 0.28
SSR4-206ENST00000460616 NEK8Q86SG6 692 aa16.81■□□□□ 0.28
SSR4-206ENST00000460616 RNF217Q8TC41 542 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms