RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 PLA2G4BP0C869 781 aa13.74□□□□□ -0.21
HDAC4-206ENST00000460235 SCP2P22307 547 aa13.74□□□□□ -0.21
HDAC4-206ENST00000460235 MARK3P27448 753 aa13.74□□□□□ -0.21
HDAC4-206ENST00000460235 ABCD1P33897 745 aa13.74□□□□□ -0.21
HDAC4-206ENST00000460235 NDUFA8P51970 172 aa13.74□□□□□ -0.21
HDAC4-206ENST00000460235 POLGP54098 1239 aaPredicted RBP13.74□□□□□ -0.21
HDAC4-206ENST00000460235 CHMP4BP1P59074 171 aa13.74□□□□□ -0.21
HDAC4-206ENST00000460235 TPRNQ4KMQ1 711 aa13.74□□□□□ -0.21
HDAC4-206ENST00000460235 CCSAPQ6IQ19 270 aaPredicted RBP13.74□□□□□ -0.21
HDAC4-206ENST00000460235 NECAB2Q7Z6G3 386 aa13.74□□□□□ -0.21
HDAC4-206ENST00000460235 RSPH3Q86UC2 560 aa13.74□□□□□ -0.21
HDAC4-206ENST00000460235 SESTD1Q86VW0 696 aa13.74□□□□□ -0.21
HDAC4-206ENST00000460235 SYT2Q8N9I0 419 aaPredicted RBP13.74□□□□□ -0.21
HDAC4-206ENST00000460235 PCYT2Q99447 389 aa13.74□□□□□ -0.21
HDAC4-206ENST00000460235 PANK2Q9BZ23 570 aa13.74□□□□□ -0.21
HDAC4-206ENST00000460235 BHMT2Q9H2M3 363 aa13.74□□□□□ -0.21
HDAC4-206ENST00000460235 NOD1Q9Y239 953 aa13.74□□□□□ -0.21
HDAC4-206ENST00000460235 TLR3O15455 904 aaKnown RBP13.73□□□□□ -0.21
HDAC4-206ENST00000460235 ZNF862O60290 1169 aa13.73□□□□□ -0.21
HDAC4-206ENST00000460235 SMC2O95347 1197 aa13.73□□□□□ -0.21
HDAC4-206ENST00000460235 INSRRP14616 1297 aa13.73□□□□□ -0.21
HDAC4-206ENST00000460235 RARRES1P49788 294 aa13.73□□□□□ -0.21
HDAC4-206ENST00000460235 ITGA7Q13683 1181 aa13.73□□□□□ -0.21
HDAC4-206ENST00000460235 FAM47CQ5HY64 1035 aa13.73□□□□□ -0.21
HDAC4-206ENST00000460235 TAF2Q6P1X5 1199 aa13.73□□□□□ -0.21
HDAC4-206ENST00000460235 USP49Q70CQ1 688 aa13.73□□□□□ -0.21
HDAC4-206ENST00000460235 TRIM50Q86XT4 487 aa13.73□□□□□ -0.21
HDAC4-206ENST00000460235 FMR1NBQ8N0W7 255 aaPredicted RBP13.73□□□□□ -0.21
HDAC4-206ENST00000460235 SLC17A8Q8NDX2 589 aa13.73□□□□□ -0.21
HDAC4-206ENST00000460235 PIGOQ8TEQ8 1089 aa13.73□□□□□ -0.21
HDAC4-206ENST00000460235 DRC1Q96MC2 740 aa13.73□□□□□ -0.21
HDAC4-206ENST00000460235 PNMA5Q96PV4 448 aa13.73□□□□□ -0.21
HDAC4-206ENST00000460235 MAP7D2Q96T17 732 aa13.73□□□□□ -0.21
HDAC4-206ENST00000460235 PLIN2Q99541 437 aa13.73□□□□□ -0.21
HDAC4-206ENST00000460235 C17orf75Q9HAS0 396 aa13.73□□□□□ -0.21
HDAC4-206ENST00000460235 ATP6V0A4Q9HBG4 840 aa13.73□□□□□ -0.21
HDAC4-206ENST00000460235 PHLPP2Q6ZVD8 1323 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 A0A1W2PQ45 241 aaPredicted RBP13.72□□□□□ -0.21
HDAC4-206ENST00000460235 A0A1W2PQY0 241 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 MYADML2A6NDP7 307 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 ASAP2O43150 1006 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 LETM1O95202 739 aaPredicted RBP13.72□□□□□ -0.21
HDAC4-206ENST00000460235 SMIM10L2AP0DMW4 78 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 SMIM10L2BP0DMW5 78 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 CYP11B2P19099 503 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 PPP2R5AQ15172 486 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 GRIK4Q16099 956 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 UGCGQ16739 394 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 NBPF20Q3BBV1 942 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 MTERF2Q49AM1 385 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 PADI6Q6TGC4 694 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 KRBA2Q6ZNG9 492 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 ANO5Q75V66 913 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 TRMT1LQ7Z2T5 733 aaKnown RBP13.72□□□□□ -0.21
HDAC4-206ENST00000460235 NME8Q8N427 588 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 CCDC155Q8N6L0 562 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 KAT2BQ92831 832 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 KIFAP3Q92845 792 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 ANP32EQ9BTT0 268 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 RNPEPQ9H4A4 650 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 DACT1Q9NYF0 836 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 ODF2LQ9ULJ1 636 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 MYH9P35579 1960 aaKnown RBP13.72□□□□□ -0.21
HDAC4-206ENST00000460235 CEP350Q5VT06 3117 aa13.72□□□□□ -0.21
HDAC4-206ENST00000460235 DCDC2CA8MYV0 355 aa13.71□□□□□ -0.21
HDAC4-206ENST00000460235 E9PMD0 336 aa13.71□□□□□ -0.21
HDAC4-206ENST00000460235 H0YCG3 227 aa13.71□□□□□ -0.21
HDAC4-206ENST00000460235 ARVCFO00192 962 aa13.71□□□□□ -0.21
HDAC4-206ENST00000460235 GADD45BO75293 160 aaPredicted RBP13.71□□□□□ -0.21
HDAC4-206ENST00000460235 TBCAO75347 108 aaKnown RBP13.71□□□□□ -0.21
HDAC4-206ENST00000460235 GUCY2CP25092 1073 aa13.71□□□□□ -0.21
HDAC4-206ENST00000460235 MXD4Q14582 209 aaPredicted RBP13.71□□□□□ -0.21
HDAC4-206ENST00000460235 TARBP2Q15633 366 aaKnown RBP13.71□□□□□ -0.21
HDAC4-206ENST00000460235 E2F4Q16254 413 aa13.71□□□□□ -0.21
HDAC4-206ENST00000460235 IER5Q5VY09 327 aa13.71□□□□□ -0.21
HDAC4-206ENST00000460235 FAM43BQ6ZT52 329 aaPredicted RBP13.71□□□□□ -0.21
HDAC4-206ENST00000460235 GPBP1Q86WP2 473 aa13.71□□□□□ -0.21
HDAC4-206ENST00000460235 CCDC65Q8IXS2 484 aa13.71□□□□□ -0.21
HDAC4-206ENST00000460235 ENGASEQ8NFI3 743 aa13.71□□□□□ -0.21
HDAC4-206ENST00000460235 IFT74Q96LB3 600 aa13.71□□□□□ -0.21
HDAC4-206ENST00000460235 MTRQ99707 1265 aa13.71□□□□□ -0.21
HDAC4-206ENST00000460235 SENP6Q9GZR1 1112 aaPredicted RBP13.71□□□□□ -0.21
HDAC4-206ENST00000460235 C11orf49Q9H6J7 331 aa13.71□□□□□ -0.21
HDAC4-206ENST00000460235 KBTBD4Q9NVX7 518 aa13.71□□□□□ -0.21
HDAC4-206ENST00000460235 RMND1Q9NWS8 449 aa13.71□□□□□ -0.21
HDAC4-206ENST00000460235 LARSQ9P2J5 1176 aaKnown RBP13.71□□□□□ -0.21
HDAC4-206ENST00000460235 GTF2IRD1Q9UHL9 959 aa13.71□□□□□ -0.21
HDAC4-206ENST00000460235 SERTAD1Q9UHV2 236 aa13.71□□□□□ -0.21
HDAC4-206ENST00000460235 TUBE1Q9UJT0 475 aa13.71□□□□□ -0.21
HDAC4-206ENST00000460235 COL4A3BPQ9Y5P4 624 aa13.71□□□□□ -0.21
HDAC4-206ENST00000460235 LOXHD1Q8IVV2 1947 aa13.7□□□□□ -0.22
HDAC4-206ENST00000460235 M0QZ92 97 aa13.7□□□□□ -0.22
HDAC4-206ENST00000460235 GTPBP6O43824 516 aaPredicted RBP13.7□□□□□ -0.22
HDAC4-206ENST00000460235 CAND2O75155 1236 aa13.7□□□□□ -0.22
HDAC4-206ENST00000460235 MAFO75444 373 aaPredicted RBP13.7□□□□□ -0.22
HDAC4-206ENST00000460235 GAP43P17677 238 aa13.7□□□□□ -0.22
HDAC4-206ENST00000460235 ATP4AP20648 1035 aa13.7□□□□□ -0.22
HDAC4-206ENST00000460235 KLRC1P26715 233 aa13.7□□□□□ -0.22
HDAC4-206ENST00000460235 SMTNP53814 917 aa13.7□□□□□ -0.22
HDAC4-206ENST00000460235 SLC12A3P55017 1021 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms