RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 LAG3P18627 525 aa9.03□□□□□ -0.96
HPS4-207ENST00000459918 RFX1P22670 979 aa9.03□□□□□ -0.96
HPS4-207ENST00000459918 ERVFC1P60507 584 aa9.03□□□□□ -0.96
HPS4-207ENST00000459918 KRT17Q04695 432 aa9.03□□□□□ -0.96
HPS4-207ENST00000459918 HDAC1Q13547 482 aaPredicted RBP9.03□□□□□ -0.96
HPS4-207ENST00000459918 PLCB4Q15147 1175 aa9.03□□□□□ -0.96
HPS4-207ENST00000459918 TPRNQ4KMQ1 711 aa9.03□□□□□ -0.96
HPS4-207ENST00000459918 ANKRD54Q6NXT1 300 aa9.03□□□□□ -0.96
HPS4-207ENST00000459918 TMC7Q7Z402 723 aa9.03□□□□□ -0.96
HPS4-207ENST00000459918 RTN4RL1Q86UN2 441 aaPredicted RBP9.03□□□□□ -0.96
HPS4-207ENST00000459918 UBALD2Q8IYN6 164 aa9.03□□□□□ -0.96
HPS4-207ENST00000459918 COLGALT1Q8NBJ5 622 aa9.03□□□□□ -0.96
HPS4-207ENST00000459918 RNF169Q8NCN4 708 aa9.03□□□□□ -0.96
HPS4-207ENST00000459918 NCOA7Q8NI08 942 aa9.03□□□□□ -0.96
HPS4-207ENST00000459918 NKD2Q969F2 451 aaPredicted RBP9.03□□□□□ -0.96
HPS4-207ENST00000459918 ADAM2Q99965 735 aa9.03□□□□□ -0.96
HPS4-207ENST00000459918 PSTPIP2Q9H939 334 aa9.03□□□□□ -0.96
HPS4-207ENST00000459918 ATP6V0A4Q9HBG4 840 aa9.03□□□□□ -0.96
HPS4-207ENST00000459918 C1orf112Q9NSG2 853 aa9.03□□□□□ -0.96
HPS4-207ENST00000459918 SLC9A2Q9UBY0 812 aa9.03□□□□□ -0.96
HPS4-207ENST00000459918 TCEAL9Q9UHQ7 104 aa9.03□□□□□ -0.96
HPS4-207ENST00000459918 SORCS3Q9UPU3 1222 aa9.03□□□□□ -0.96
HPS4-207ENST00000459918 PCDHA2Q9Y5H9 948 aa9.03□□□□□ -0.96
HPS4-207ENST00000459918 SQORQ9Y6N5 450 aa9.03□□□□□ -0.96
HPS4-207ENST00000459918 SPTBN4Q9H254 2564 aa9.03□□□□□ -0.96
HPS4-207ENST00000459918 PRR23AA6NEV1 266 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 PIK3CDO00329 1044 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 GPR182O15218 404 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 FGFR1P11362 822 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 ITGB5P18084 799 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 PPM1AP35813 382 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 STAT5BP51692 787 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 BMS1Q14692 1282 aaKnown RBP9.02□□□□□ -0.97
HPS4-207ENST00000459918 UBE2SQ16763 222 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 FAM102BQ5T8I3 360 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 MCTP2Q6DN12 878 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 CASC1Q6TDU7 716 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 SLC24A5Q71RS6 500 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 ASCL5Q7RTU5 278 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 HEATR3Q7Z4Q2 680 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 CHD1LQ86WJ1 897 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 CKAP2LQ8IYA6 745 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 TDRD5Q8NAT2 981 aaKnown RBP9.02□□□□□ -0.97
HPS4-207ENST00000459918 FLCNQ8NFG4 579 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 VN1R2Q8NFZ6 395 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 KCNG4Q8TDN1 519 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 SUSD6Q92537 303 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 MRPS27Q92552 414 aaKnown RBP9.02□□□□□ -0.97
HPS4-207ENST00000459918 CASP10Q92851 521 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 NECTIN4Q96NY8 510 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 MYL10Q9BUA6 226 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 RWDD1Q9H446 243 aaPredicted RBP9.02□□□□□ -0.97
HPS4-207ENST00000459918 SENP2Q9HC62 589 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 TYW1Q9NV66 732 aaKnown RBP9.02□□□□□ -0.97
HPS4-207ENST00000459918 HCSTQ9UBK5 93 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 DBR1Q9UK59 544 aaKnown RBP9.02□□□□□ -0.97
HPS4-207ENST00000459918 EVPLQ92817 2033 aa9.02□□□□□ -0.97
HPS4-207ENST00000459918 VPS13AQ96RL7 3174 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 SMIM35A0A1B0GVV1 85 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 CCDC69A6NI79 296 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 DDX39AO00148 427 aaKnown RBP9.01□□□□□ -0.97
HPS4-207ENST00000459918 MEIS2O14770 477 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 HOXA2O43364 376 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 HOXB8P17481 243 aaPredicted RBP9.01□□□□□ -0.97
HPS4-207ENST00000459918 PDE4AP27815 886 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 ID4P47928 161 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 ACTR2P61160 394 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 TROAPQ12815 778 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 SMC1AQ14683 1233 aaKnown RBP9.01□□□□□ -0.97
HPS4-207ENST00000459918 SLC35G1Q2M3R5 365 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 FAM160B1Q5W0V3 765 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 MTHFD1LQ6UB35 978 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 MAMSTRQ6ZN01 415 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 TRMT1LQ7Z2T5 733 aaKnown RBP9.01□□□□□ -0.97
HPS4-207ENST00000459918 FRMD5Q7Z6J6 570 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 ZNF654Q8IZM8 581 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 CMTR1Q8N1G2 835 aaKnown RBP9.01□□□□□ -0.97
HPS4-207ENST00000459918 LRRC43Q8N309 656 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 NME8Q8N427 588 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 METTL13Q8N6R0 699 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 TMEM105Q8N8V8 129 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 ATP8B4Q8TF62 1192 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 RUFY2Q8WXA3 655 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 ZNF558Q96NG5 402 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 SCLT1Q96NL6 688 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 OSMRQ99650 979 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 HINFPQ9BQA5 517 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 SPZ1Q9BXG8 430 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 TMX1Q9H3N1 280 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 NGRNQ9NPE2 291 aaKnown RBP9.01□□□□□ -0.97
HPS4-207ENST00000459918 JADE2Q9NQC1 790 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 PLSCR2Q9NRY7 297 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 ST3GAL5Q9UNP4 418 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 PCDHB13Q9Y5F0 798 aa9.01□□□□□ -0.97
HPS4-207ENST00000459918 MYH9P35579 1960 aaKnown RBP9.01□□□□□ -0.97
HPS4-207ENST00000459918 hCG_1642624A0A1W2PR95 340 aa9□□□□□ -0.97
HPS4-207ENST00000459918 POTEMA6NI47 508 aa9□□□□□ -0.97
HPS4-207ENST00000459918 HIDE1A8MVS5 230 aa9□□□□□ -0.97
HPS4-207ENST00000459918 C2CD4DB7Z1M9 353 aa9□□□□□ -0.97
HPS4-207ENST00000459918 E7EWF7 191 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms