RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	DDX11L8	A8MPP1	907 aa		11.51	□□□□□ -0.57
MRPL55-223	ENST00000459783	LYPLA2	O95372	231 aa		11.51	□□□□□ -0.57
MRPL55-223	ENST00000459783	HSP90AA1	P07900	732 aa	Known RBP	11.51	□□□□□ -0.57
MRPL55-223	ENST00000459783	ZSCAN22	P10073	491 aa	Predicted RBP	11.51	□□□□□ -0.57
MRPL55-223	ENST00000459783	GNAT1	P11488	350 aa		11.51	□□□□□ -0.57
MRPL55-223	ENST00000459783	DDIT3	P35638	169 aa		11.51	□□□□□ -0.57
MRPL55-223	ENST00000459783	PRPH	P41219	470 aa		11.51	□□□□□ -0.57
MRPL55-223	ENST00000459783	CLCN3	P51790	818 aa		11.51	□□□□□ -0.57
MRPL55-223	ENST00000459783	MTERF2	Q49AM1	385 aa		11.51	□□□□□ -0.57
MRPL55-223	ENST00000459783	FAM26D	Q5JW98	314 aa		11.51	□□□□□ -0.57
MRPL55-223	ENST00000459783	DEFB128	Q7Z7B8	93 aa		11.51	□□□□□ -0.57
MRPL55-223	ENST00000459783	RPAIN	Q86UA6	219 aa		11.51	□□□□□ -0.57
MRPL55-223	ENST00000459783	CATSPER3	Q86XQ3	398 aa		11.51	□□□□□ -0.57
MRPL55-223	ENST00000459783	LRRC71	Q8N4P6	559 aa		11.51	□□□□□ -0.57
MRPL55-223	ENST00000459783	FAM167A	Q96KS9	214 aa		11.51	□□□□□ -0.57
MRPL55-223	ENST00000459783	CDHR5	Q9HBB8	845 aa		11.51	□□□□□ -0.57
MRPL55-223	ENST00000459783	IL23A	Q9NPF7	189 aa		11.51	□□□□□ -0.57
MRPL55-223	ENST00000459783	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.51	□□□□□ -0.57
MRPL55-223	ENST00000459783	SCN5A	Q14524	2016 aa		11.51	□□□□□ -0.57
MRPL55-223	ENST00000459783	SI	P14410	1827 aa		11.51	□□□□□ -0.57
MRPL55-223	ENST00000459783	IGKV6-21	A0A0C4DH24	114 aa		11.5	□□□□□ -0.57
MRPL55-223	ENST00000459783	SMIM35	A0A1B0GVV1	85 aa		11.5	□□□□□ -0.57
MRPL55-223	ENST00000459783	SOX1	O00570	391 aa	Predicted RBP	11.5	□□□□□ -0.57
MRPL55-223	ENST00000459783	BRD1	O95696	1058 aa		11.5	□□□□□ -0.57
MRPL55-223	ENST00000459783	F13A1	P00488	732 aa		11.5	□□□□□ -0.57
MRPL55-223	ENST00000459783	CXCL10	P02778	98 aa		11.5	□□□□□ -0.57
MRPL55-223	ENST00000459783	TMEM62	Q0P6H9	643 aa		11.5	□□□□□ -0.57
MRPL55-223	ENST00000459783	PPIG	Q13427	754 aa	Known RBP eCLIP	11.5	□□□□□ -0.57	6e-7	■■■■□ 20.4
MRPL55-223	ENST00000459783	RASIP1	Q5U651	963 aa		11.5	□□□□□ -0.57
MRPL55-223	ENST00000459783	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.5	□□□□□ -0.57
MRPL55-223	ENST00000459783	TAF2	Q6P1X5	1199 aa		11.5	□□□□□ -0.57
MRPL55-223	ENST00000459783	POTEG	Q6S5H5	508 aa		11.5	□□□□□ -0.57
MRPL55-223	ENST00000459783	ZNF365	Q70YC5	407 aa		11.5	□□□□□ -0.57
MRPL55-223	ENST00000459783	KCNK18	Q7Z418	384 aa		11.5	□□□□□ -0.57
MRPL55-223	ENST00000459783	TPH2	Q8IWU9	490 aa		11.5	□□□□□ -0.57
MRPL55-223	ENST00000459783	TMEM199	Q8N511	208 aa		11.5	□□□□□ -0.57
MRPL55-223	ENST00000459783	PIGO	Q8TEQ8	1089 aa		11.5	□□□□□ -0.57
MRPL55-223	ENST00000459783	LRRC15	Q8TF66	581 aa		11.5	□□□□□ -0.57
MRPL55-223	ENST00000459783	ZSWIM4	Q9H7M6	989 aa		11.5	□□□□□ -0.57
MRPL55-223	ENST00000459783	XPNPEP1	Q9NQW7	623 aa		11.5	□□□□□ -0.57
MRPL55-223	ENST00000459783	NRBP2	Q9NSY0	501 aa		11.5	□□□□□ -0.57
MRPL55-223	ENST00000459783	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.5	□□□□□ -0.57
MRPL55-223	ENST00000459783	VWA3A	A6NCI4	1184 aa		11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	RSPH10B2	B2RC85	870 aa		11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	LAD1	O00515	517 aa		11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	RSPH10B	P0C881	870 aa		11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	RPA1	P27694	616 aa		11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	YWHAB	P31946	246 aa	Known RBP	11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	MRPS6	P82932	125 aa	Known RBP	11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	CEBPZ	Q03701	1054 aa	Known RBP	11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	LPIN1	Q14693	890 aa		11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	TDH	Q8IZJ6	230 aa		11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	CCDC155	Q8N6L0	562 aa		11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	RETREG2	Q8NC44	543 aa		11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	NEK9	Q8TD19	979 aa		11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	TMEM40	Q8WWA1	233 aa		11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	PNMA5	Q96PV4	448 aa		11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	PPP1R16B	Q96T49	567 aa		11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	DHX33	Q9H6R0	707 aa	Known RBP	11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	TUFT1	Q9NNX1	390 aa		11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	CYP26B1	Q9NR63	512 aa		11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	LRWD1	Q9UFC0	647 aa		11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	FBXO2	Q9UK22	296 aa	Predicted RBP	11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	CDY2A	Q9Y6F7	541 aa		11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	TRIOBP	Q9H2D6	2365 aa		11.49	□□□□□ -0.57
MRPL55-223	ENST00000459783	TET1	Q8NFU7	2136 aa		11.48	□□□□□ -0.57
MRPL55-223	ENST00000459783	RANBP2	P49792	3224 aa	Known RBP	11.48	□□□□□ -0.57
MRPL55-223	ENST00000459783	CAND2	O75155	1236 aa		11.48	□□□□□ -0.57
MRPL55-223	ENST00000459783	GPR32	O75388	356 aa		11.48	□□□□□ -0.57
MRPL55-223	ENST00000459783	MAF	O75444	373 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPL55-223	ENST00000459783	VTN	P04004	478 aa		11.48	□□□□□ -0.57
MRPL55-223	ENST00000459783	MARCKS	P29966	332 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPL55-223	ENST00000459783	NASP	P49321	788 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPL55-223	ENST00000459783	RARRES1	P49788	294 aa		11.48	□□□□□ -0.57
MRPL55-223	ENST00000459783	PDIA5	Q14554	519 aa		11.48	□□□□□ -0.57
MRPL55-223	ENST00000459783	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPL55-223	ENST00000459783	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.48	□□□□□ -0.57
MRPL55-223	ENST00000459783	EFCAB12	Q6NXP0	572 aa		11.48	□□□□□ -0.57
MRPL55-223	ENST00000459783	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPL55-223	ENST00000459783	DTHD1	Q6ZMT9	781 aa		11.48	□□□□□ -0.57
MRPL55-223	ENST00000459783	USP49	Q70CQ1	688 aa		11.48	□□□□□ -0.57
MRPL55-223	ENST00000459783	ZNF668	Q96K58	619 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPL55-223	ENST00000459783	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPL55-223	ENST00000459783	AGO3	Q9H9G7	860 aa	Known RBP	11.48	□□□□□ -0.57
MRPL55-223	ENST00000459783	TFIP11	Q9UBB9	837 aa	Known RBP	11.48	□□□□□ -0.57
MRPL55-223	ENST00000459783	CEP131	Q9UPN4	1083 aa		11.48	□□□□□ -0.57
MRPL55-223	ENST00000459783	KDM3A	Q9Y4C1	1321 aa		11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	GHR	P10912	638 aa		11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	RFC2	P35250	354 aa		11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	CCT6A	P40227	531 aa	Known RBP	11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	TBC1D8B	Q0IIM8	1120 aa		11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	GRB10	Q13322	594 aa		11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	SLC39A14	Q15043	492 aa		11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	KIZ	Q2M2Z5	673 aa		11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	TMEM266	Q2M3C6	531 aa		11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	PLEKHG4	Q58EX7	1191 aa		11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	XKR9	Q5GH70	373 aa		11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	SPECC1	Q5M775	1068 aa		11.47	□□□□□ -0.57

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