RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 TRPV2Q9Y5S1 764 aa23.32■■□□□ 1.32
VARS-218ENST00000459667 MICAL3Q7RTP6 2002 aa23.32■■□□□ 1.32
VARS-218ENST00000459667 MCM7P33993 719 aa23.31■■□□□ 1.32
VARS-218ENST00000459667 PSMC5P62195 406 aa23.31■■□□□ 1.32
VARS-218ENST00000459667 XKR3Q5GH77 459 aa23.31■■□□□ 1.32
VARS-218ENST00000459667 NME8Q8N427 588 aa23.31■■□□□ 1.32
VARS-218ENST00000459667 APBB2Q92870 758 aa23.31■■□□□ 1.32
VARS-218ENST00000459667 IFIH1Q9BYX4 1025 aaKnown RBP23.31■■□□□ 1.32
VARS-218ENST00000459667 SEPT9Q9UHD8 586 aaPredicted RBP23.31■■□□□ 1.32
VARS-218ENST00000459667 SMC3Q9UQE7 1217 aa23.31■■□□□ 1.32
VARS-218ENST00000459667 EVPLQ92817 2033 aa23.31■■□□□ 1.32
VARS-218ENST00000459667 DEFB103AP81534 67 aa23.3■■□□□ 1.32
VARS-218ENST00000459667 SPIRE1Q08AE8 756 aa23.3■■□□□ 1.32
VARS-218ENST00000459667 LPIN1Q14693 890 aa23.3■■□□□ 1.32
VARS-218ENST00000459667 FBXO47Q5MNV8 452 aa23.3■■□□□ 1.32
VARS-218ENST00000459667 HERC6Q8IVU3 1022 aa23.3■■□□□ 1.32
VARS-218ENST00000459667 NKX2-4Q9H2Z4 354 aa23.3■■□□□ 1.32
VARS-218ENST00000459667 SEMA6BQ9H3T3 888 aa23.3■■□□□ 1.32
VARS-218ENST00000459667 YBX2Q9Y2T7 364 aaKnown RBP23.3■■□□□ 1.32
VARS-218ENST00000459667 PCDHA11Q9Y5I1 949 aa23.3■■□□□ 1.32
VARS-218ENST00000459667 MAGEB2O15479 319 aa23.29■■□□□ 1.32
VARS-218ENST00000459667 U2AF2P26368 475 aaKnown RBP eCLIP23.29■■□□□ 1.32
VARS-218ENST00000459667 QARSP47897 775 aaKnown RBP23.29■■□□□ 1.32
VARS-218ENST00000459667 EPHA7Q15375 998 aa23.29■■□□□ 1.32
VARS-218ENST00000459667 KIAA0319LQ8IZA0 1049 aa23.29■■□□□ 1.32
VARS-218ENST00000459667 METTL13Q8N6R0 699 aa23.29■■□□□ 1.32
VARS-218ENST00000459667 MTMR9Q96QG7 549 aa23.29■■□□□ 1.32
VARS-218ENST00000459667 CELF4Q9BZC1 486 aaKnown RBP23.29■■□□□ 1.32
VARS-218ENST00000459667 TTC12Q9H892 705 aaPredicted RBP23.29■■□□□ 1.32
VARS-218ENST00000459667 NOL7Q9UMY1 257 aaKnown RBP23.29■■□□□ 1.32
VARS-218ENST00000459667 PCDHA12Q9UN75 941 aa23.29■■□□□ 1.32
VARS-218ENST00000459667 DKC1O60832 514 aaKnown RBP eCLIP23.28■■□□□ 1.32
VARS-218ENST00000459667 STBD1O95210 358 aa23.28■■□□□ 1.32
VARS-218ENST00000459667 P4HBP07237 508 aaKnown RBP23.28■■□□□ 1.32
VARS-218ENST00000459667 TXKP42681 527 aa23.28■■□□□ 1.32
VARS-218ENST00000459667 TRAPPC10P48553 1259 aa23.28■■□□□ 1.32
VARS-218ENST00000459667 CLCN3P51790 818 aa23.28■■□□□ 1.32
VARS-218ENST00000459667 ORC2Q13416 577 aaPredicted RBP23.28■■□□□ 1.32
VARS-218ENST00000459667 ZNF174Q15697 407 aa23.28■■□□□ 1.32
VARS-218ENST00000459667 MTERF2Q49AM1 385 aa23.28■■□□□ 1.32
VARS-218ENST00000459667 TTC38Q5R3I4 469 aa23.28■■□□□ 1.32
VARS-218ENST00000459667 TSHZ1Q6ZSZ6 1077 aa23.28■■□□□ 1.32
VARS-218ENST00000459667 NIFKQ9BYG3 293 aaKnown RBP23.28■■□□□ 1.32
VARS-218ENST00000459667 TMEM60Q9H2L4 133 aa23.28■■□□□ 1.32
VARS-218ENST00000459667 ZNF576Q9H609 170 aa23.28■■□□□ 1.32
VARS-218ENST00000459667 KDM3AQ9Y4C1 1321 aa23.28■■□□□ 1.32
VARS-218ENST00000459667 LOXHD1Q8IVV2 1947 aa23.27■■□□□ 1.32
VARS-218ENST00000459667 TMEM150BA6NC51 233 aa23.27■■□□□ 1.32
VARS-218ENST00000459667 DDX11L8A8MPP1 907 aa23.27■■□□□ 1.32
VARS-218ENST00000459667 H3BQV1 296 aa23.27■■□□□ 1.32
VARS-218ENST00000459667 AMHP03971 560 aa23.27■■□□□ 1.32
VARS-218ENST00000459667 MYOGP15173 224 aa23.27■■□□□ 1.32
VARS-218ENST00000459667 TBC1D8BQ0IIM8 1120 aa23.27■■□□□ 1.32
VARS-218ENST00000459667 MKRN4PQ13434 485 aaPredicted RBP23.27■■□□□ 1.32
VARS-218ENST00000459667 TARBP2Q15633 366 aaKnown RBP23.27■■□□□ 1.32
VARS-218ENST00000459667 MCTP1Q6DN14 999 aa23.27■■□□□ 1.32
VARS-218ENST00000459667 EFCAB12Q6NXP0 572 aa23.27■■□□□ 1.32
VARS-218ENST00000459667 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.27■■□□□ 1.32
VARS-218ENST00000459667 TMCO2Q7Z6W1 182 aaPredicted RBP23.27■■□□□ 1.32
VARS-218ENST00000459667 GUCD1Q96NT3 240 aa23.27■■□□□ 1.32
VARS-218ENST00000459667 LXNQ9BS40 222 aa23.27■■□□□ 1.32
VARS-218ENST00000459667 SLC28A3Q9HAS3 691 aa23.27■■□□□ 1.32
VARS-218ENST00000459667 GINS2Q9Y248 185 aa23.27■■□□□ 1.32
VARS-218ENST00000459667 SQORQ9Y6N5 450 aa23.27■■□□□ 1.32
VARS-218ENST00000459667 TMOD1P28289 359 aa23.26■■□□□ 1.31
VARS-218ENST00000459667 CUL4AQ13619 759 aa23.26■■□□□ 1.31
VARS-218ENST00000459667 MYOCDQ8IZQ8 938 aa23.26■■□□□ 1.31
VARS-218ENST00000459667 LRRC71Q8N4P6 559 aa23.26■■□□□ 1.31
VARS-218ENST00000459667 LINC01465Q8N7H1 131 aa23.26■■□□□ 1.31
VARS-218ENST00000459667 USP38Q8NB14 1042 aa23.26■■□□□ 1.31
VARS-218ENST00000459667 DYDC2Q96IM9 177 aa23.26■■□□□ 1.31
VARS-218ENST00000459667 MAP7D2Q96T17 732 aa23.26■■□□□ 1.31
VARS-218ENST00000459667 SH2D3AQ9BRG2 576 aa23.26■■□□□ 1.31
VARS-218ENST00000459667 ZBED2Q9BTP6 218 aa23.26■■□□□ 1.31
VARS-218ENST00000459667 RGL1Q9NZL6 768 aa23.26■■□□□ 1.31
VARS-218ENST00000459667 WRAP73Q9P2S5 460 aaPredicted RBP23.26■■□□□ 1.31
VARS-218ENST00000459667 TLL1O43897 1013 aa23.25■■□□□ 1.31
VARS-218ENST00000459667 VTNP04004 478 aa23.25■■□□□ 1.31
VARS-218ENST00000459667 OR52Z1P0C646 297 aa23.25■■□□□ 1.31
VARS-218ENST00000459667 CD52P31358 61 aa23.25■■□□□ 1.31
VARS-218ENST00000459667 CYP4A11Q02928 519 aa23.25■■□□□ 1.31
VARS-218ENST00000459667 PPP2R2DQ66LE6 453 aa23.25■■□□□ 1.31
VARS-218ENST00000459667 PLA2G4FQ68DD2 849 aa23.25■■□□□ 1.31
VARS-218ENST00000459667 ANO5Q75V66 913 aa23.25■■□□□ 1.31
VARS-218ENST00000459667 PPP1R16BQ96T49 567 aa23.25■■□□□ 1.31
VARS-218ENST00000459667 AGO3Q9H9G7 860 aaKnown RBP23.25■■□□□ 1.31
VARS-218ENST00000459667 SUGCTQ9HAC7 445 aa23.25■■□□□ 1.31
VARS-218ENST00000459667 AKT3Q9Y243 479 aa23.25■■□□□ 1.31
VARS-218ENST00000459667 GJB5O95377 273 aa23.24■■□□□ 1.31
VARS-218ENST00000459667 CA3P07451 260 aa23.24■■□□□ 1.31
VARS-218ENST00000459667 CTTNQ14247 550 aaKnown RBP23.24■■□□□ 1.31
VARS-218ENST00000459667 NBR1Q14596 966 aa23.24■■□□□ 1.31
VARS-218ENST00000459667 C4orf19Q8IY42 314 aa23.24■■□□□ 1.31
VARS-218ENST00000459667 CEP89Q96ST8 783 aa23.24■■□□□ 1.31
VARS-218ENST00000459667 CDX2Q99626 313 aaPredicted RBP23.24■■□□□ 1.31
VARS-218ENST00000459667 EIF2AK1Q9BQI3 630 aaKnown RBP23.24■■□□□ 1.31
VARS-218ENST00000459667 ZSWIM4Q9H7M6 989 aa23.24■■□□□ 1.31
VARS-218ENST00000459667 CDHR5Q9HBB8 845 aa23.24■■□□□ 1.31
VARS-218ENST00000459667 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.23■■□□□ 1.31
VARS-218ENST00000459667 POTEMA6NI47 508 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms