RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 ATG4CQ96DT6 458 aa0.73□□□□□ -2.29
SNORD42B-201ENST00000458893 THOC3Q96J01 351 aaKnown RBP0.73□□□□□ -2.29
SNORD42B-201ENST00000458893 CTAGE1Q96RT6 745 aa0.73□□□□□ -2.29
SNORD42B-201ENST00000458893 TRMOQ9BU70 441 aa0.73□□□□□ -2.29
SNORD42B-201ENST00000458893 SMOC1Q9H4F8 434 aa0.73□□□□□ -2.29
SNORD42B-201ENST00000458893 CNNM2Q9H8M5 875 aa0.73□□□□□ -2.29
SNORD42B-201ENST00000458893 RNF181Q9P0P0 153 aa0.73□□□□□ -2.29
SNORD42B-201ENST00000458893 SLC17A6Q9P2U8 582 aa0.73□□□□□ -2.29
SNORD42B-201ENST00000458893 SUCOQ9UBS9 1254 aaKnown RBP0.73□□□□□ -2.29
SNORD42B-201ENST00000458893 WASF3Q9UPY6 502 aa0.73□□□□□ -2.29
SNORD42B-201ENST00000458893 TLR6Q9Y2C9 796 aa0.73□□□□□ -2.29
SNORD42B-201ENST00000458893 POLR3KQ9Y2Y1 108 aaPredicted RBP0.73□□□□□ -2.29
SNORD42B-201ENST00000458893 NUB1Q9Y5A7 615 aa0.73□□□□□ -2.29
SNORD42B-201ENST00000458893 TIMM13Q9Y5L4 95 aaPredicted RBP0.73□□□□□ -2.29
SNORD42B-201ENST00000458893 KLRG2A4D1S0 409 aaPredicted RBP0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 RNASET2O00584 256 aaKnown RBP0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 NTN3O00634 580 aaPredicted RBP0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 VAMP4O75379 141 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 NDUFA10O95299 355 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 F13A1P00488 732 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 IGKV3-20P01619 116 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 PRKCGP05129 697 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 HLA-DOAP06340 250 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 GNAT2P19087 354 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 EIF4BP23588 611 aaKnown RBP0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 MMP13P45452 471 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 RARRES1P49788 294 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 KRTAP10-1P60331 282 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 ARHGAP4P98171 946 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 GRIN1Q05586 938 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 GRM1Q13255 1194 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 CAMK2GQ13555 558 aaPredicted RBP0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 KLF9Q13886 244 aaPredicted RBP0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 LRRFIP1Q32MZ4 808 aaKnown RBP0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 C9orf50Q5SZB4 431 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 LCE1CQ5T751 118 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 LCE1BQ5T7P3 118 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 TDRD10Q5VZ19 366 aaKnown RBP0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 IQCEQ6IPM2 695 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 C18orf65Q6ZTR6 163 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 REC114Q7Z4M0 266 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 BRAPQ7Z569 592 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 ADAT2Q7Z6V5 191 aaKnown RBP0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 SLC44A3Q8N4M1 653 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 RBMXL3Q8N7X1 1067 aaKnown RBP0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 ZNF513Q8N8E2 541 aaPredicted RBP0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 KREMEN2Q8NCW0 462 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 HASPINQ8TF76 798 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 RABGGTAQ92696 567 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 ARL8AQ96BM9 186 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 FRMD6Q96NE9 622 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 MMP19Q99542 508 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 SLC46A2Q9BY10 475 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 RBCK1Q9BYM8 510 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 ZDHHC5Q9C0B5 715 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 KLK15Q9H2R5 256 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 IGSF5Q9NSI5 407 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 ELOVL5Q9NYP7 299 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 CLEC1BQ9P126 229 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 LRIT1Q9P2V4 623 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 PCDHB14Q9Y5E9 798 aa0.72□□□□□ -2.29
SNORD42B-201ENST00000458893 IGKV6D-41A0A0C4DH26 115 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 PIPSLA2A3N6 862 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 FAM221AA4D161 298 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 FAM86C2PA6NEL3 165 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 MANSC4A6NHS7 340 aaPredicted RBP0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 TMEM200CA6NKL6 621 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 C9IYK1 514 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 H7BY64 318 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 SHOXO15266 292 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 ORC4O43929 436 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 CLASP2O75122 1294 aaKnown RBP0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 TP53P04637 393 aaPredicted RBP0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 CD1AP06126 327 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 T-ENOLP0DO92 83 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 PLS3P13797 630 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 NME1P15531 152 aaKnown RBP0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 GPD1P21695 349 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 ADCY8P40145 1251 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 CXCR3P49682 368 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 TAF6P49848 677 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 RABGGTBP53611 331 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 SIM1P81133 766 aaPredicted RBP0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 E2F1Q01094 437 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 RHDQ02161 417 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 LMNB2Q03252 620 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 SLC10A2Q12908 348 aaPredicted RBP0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 COL9A2Q14055 689 aaPredicted RBP0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 ZNF169Q14929 603 aaPredicted RBP0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 LLGL1Q15334 1064 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 SF3B4Q15427 424 aaKnown RBP eCLIP0.71□□□□□ -2.36e-46■■■■■ 27.9
SNORD42B-201ENST00000458893 EMC4Q5J8M3 183 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 SNAP47Q5SQN1 464 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 PXDC1Q5TGL8 231 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 MORN5Q5VZ52 161 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 DCAF15Q66K64 600 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 IQSEC1Q6DN90 963 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 PROSER1Q86XN7 944 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 RELL1Q8IUW5 271 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 SYT12Q8IV01 421 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms