RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 CCDC65Q8IXS2 484 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 ANKRD13CQ8N6S4 541 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 GIMAP8Q8ND71 665 aaPredicted RBP9.95□□□□□ -0.82
VPS50-207ENST00000458530 ANKRD20A12PQ8NF67 263 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 IL31RAQ8NI17 732 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 CYP2W1Q8TAV3 490 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 ENOX1Q8TC92 643 aaKnown RBP9.95□□□□□ -0.82
VPS50-207ENST00000458530 TRIB2Q92519 343 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 PDLIM2Q96JY6 352 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 INPP4AQ96PE3 977 aaPredicted RBP9.95□□□□□ -0.82
VPS50-207ENST00000458530 MMP19Q99542 508 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 EIF2AK1Q9BQI3 630 aaKnown RBP9.95□□□□□ -0.82
VPS50-207ENST00000458530 MOV10L1Q9BXT6 1211 aaKnown RBP9.95□□□□□ -0.82
VPS50-207ENST00000458530 TRIM5Q9C035 493 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 BLZF1Q9H2G9 400 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 AGO4Q9HCK5 861 aaKnown RBP9.95□□□□□ -0.82
VPS50-207ENST00000458530 HMX1Q9NP08 348 aaPredicted RBP9.95□□□□□ -0.82
VPS50-207ENST00000458530 BLOC1S4Q9NUP1 217 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 KCND2Q9NZV8 630 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 MORF4L1Q9UBU8 362 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 NFASCO94856 1347 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 MCM3APO60318 1980 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 WDR64B1ANS9 1081 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 DPYSL4O14531 572 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 CHMP2AO43633 222 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 MED24O75448 989 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 EIF3JO75822 258 aaKnown RBP9.94□□□□□ -0.82
VPS50-207ENST00000458530 ADCY5O95622 1261 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 EYA4O95677 639 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 SSBP05455 408 aaKnown RBP eCLIP9.94□□□□□ -0.82
VPS50-207ENST00000458530 P4HBP07237 508 aaKnown RBP9.94□□□□□ -0.82
VPS50-207ENST00000458530 PLA2G4BP0C869 781 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 ARP10275 920 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 FCER1AP12319 257 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 XRCC5P13010 732 aaKnown RBP9.94□□□□□ -0.82
VPS50-207ENST00000458530 ERCC3P19447 782 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 CDC25BP30305 580 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 ALDH5A1P51649 535 aaPredicted RBP9.94□□□□□ -0.82
VPS50-207ENST00000458530 MRPS9P82933 396 aaKnown RBP9.94□□□□□ -0.82
VPS50-207ENST00000458530 PDE4DQ08499 809 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 PAK1Q13153 545 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 LRRC26Q2I0M4 334 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 KMT5BQ4FZB7 885 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 COBLL1Q53SF7 1204 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 HS1BP3Q53T59 392 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 ISM2Q6H9L7 571 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 ZNF746Q6NUN9 644 aaPredicted RBP9.94□□□□□ -0.82
VPS50-207ENST00000458530 KCNV1Q6PIU1 500 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 GPBP1Q86WP2 473 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 CATSPER3Q86XQ3 398 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 SMAP1Q8IYB5 467 aaPredicted RBP9.94□□□□□ -0.82
VPS50-207ENST00000458530 GPRC5AQ8NFJ5 357 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 USP6NLQ92738 828 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 STAMQ92783 540 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 CCDC43Q96MW1 224 aaKnown RBP9.94□□□□□ -0.82
VPS50-207ENST00000458530 NACC1Q96RE7 527 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 MTRQ99707 1265 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 UNC45AQ9H3U1 944 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 IVNS1ABPQ9Y6Y0 642 aa9.94□□□□□ -0.82
VPS50-207ENST00000458530 STRNO43815 780 aa9.93□□□□□ -0.82
VPS50-207ENST00000458530 TBCAO75347 108 aaKnown RBP9.93□□□□□ -0.82
VPS50-207ENST00000458530 CNMDO75829 334 aa9.93□□□□□ -0.82
VPS50-207ENST00000458530 IDEP14735 1019 aa9.93□□□□□ -0.82
VPS50-207ENST00000458530 GAP43P17677 238 aa9.93□□□□□ -0.82
VPS50-207ENST00000458530 SPAG1Q07617 926 aa9.93□□□□□ -0.82
VPS50-207ENST00000458530 WDR78Q5VTH9 848 aa9.93□□□□□ -0.82
VPS50-207ENST00000458530 SPATA1Q5VX52 437 aa9.93□□□□□ -0.82
VPS50-207ENST00000458530 ABRAQ8N0Z2 381 aa9.93□□□□□ -0.82
VPS50-207ENST00000458530 SYT2Q8N9I0 419 aaPredicted RBP9.93□□□□□ -0.82
VPS50-207ENST00000458530 NOC3LQ8WTT2 800 aaKnown RBP9.93□□□□□ -0.82
VPS50-207ENST00000458530 DDX12PQ92771 950 aa9.93□□□□□ -0.82
VPS50-207ENST00000458530 GJA10Q969M2 543 aa9.93□□□□□ -0.82
VPS50-207ENST00000458530 MRFAP1L1Q96HT8 127 aa9.93□□□□□ -0.82
VPS50-207ENST00000458530 DHTKD1Q96HY7 919 aaPredicted RBP9.93□□□□□ -0.82
VPS50-207ENST00000458530 CTAGE1Q96RT6 745 aa9.93□□□□□ -0.82
VPS50-207ENST00000458530 SENP7Q9BQF6 1050 aa9.93□□□□□ -0.82
VPS50-207ENST00000458530 ZSWIM4Q9H7M6 989 aa9.93□□□□□ -0.82
VPS50-207ENST00000458530 RBPJLQ9UBG7 517 aa9.93□□□□□ -0.82
VPS50-207ENST00000458530 RWDD2AQ9UIY3 292 aa9.93□□□□□ -0.82
VPS50-207ENST00000458530 CTNND2Q9UQB3 1225 aa9.93□□□□□ -0.82
VPS50-207ENST00000458530 SAMM50Q9Y512 469 aa9.93□□□□□ -0.82
VPS50-207ENST00000458530 NCOR1O75376 2440 aa9.93□□□□□ -0.82
VPS50-207ENST00000458530 A0A087WWV3 80 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 MYMKA6NI61 221 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 ASB14A6NK59 587 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 EML1O00423 815 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 KLRC4O43908 158 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 LYPLA2O95372 231 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 FGFR1OPO95684 399 aaKnown RBP9.92□□□□□ -0.82
VPS50-207ENST00000458530 TPM2P07951 284 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 SPATA31C1P0DKV0 1188 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 CDK11BP21127 795 aaKnown RBP9.92□□□□□ -0.82
VPS50-207ENST00000458530 BMP6P22004 513 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 CASP1P29466 404 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 ICAM3P32942 547 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 QARSP47897 775 aaKnown RBP9.92□□□□□ -0.82
VPS50-207ENST00000458530 ZNF75DP51815 510 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 CYP4A11Q02928 519 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 CAMK2BQ13554 666 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 KLHL10Q6JEL2 608 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms