RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 RARRES1P49788 294 aa13.15□□□□□ -0.3
TRAPPC12-212ENST00000457845 CHMP4BP1P59074 171 aa13.15□□□□□ -0.3
TRAPPC12-212ENST00000457845 ZNF200P98182 395 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC12-212ENST00000457845 TMEM119Q4V9L6 283 aa13.15□□□□□ -0.3
TRAPPC12-212ENST00000457845 SPECC1Q5M775 1068 aa13.15□□□□□ -0.3
TRAPPC12-212ENST00000457845 POTEGQ6S5H5 508 aa13.15□□□□□ -0.3
TRAPPC12-212ENST00000457845 SHC4Q6S5L8 630 aa13.15□□□□□ -0.3
TRAPPC12-212ENST00000457845 SERINC5Q86VE9 423 aa13.15□□□□□ -0.3
TRAPPC12-212ENST00000457845 LINC01465Q8N7H1 131 aa13.15□□□□□ -0.3
TRAPPC12-212ENST00000457845 SYMPKQ92797 1274 aaKnown RBP13.15□□□□□ -0.3
TRAPPC12-212ENST00000457845 TRPV6Q9H1D0 765 aa13.15□□□□□ -0.3
TRAPPC12-212ENST00000457845 CYP26B1Q9NR63 512 aa13.15□□□□□ -0.3
TRAPPC12-212ENST00000457845 TRMT13Q9NUP7 481 aaKnown RBP13.15□□□□□ -0.3
TRAPPC12-212ENST00000457845 SEPT9Q9UHD8 586 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC12-212ENST00000457845 KIAA1024Q9UPX6 916 aa13.15□□□□□ -0.3
TRAPPC12-212ENST00000457845 PDE4DIPQ5VU43 2346 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 SCN5AQ14524 2016 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 FAM237AA0A1B0GTK4 181 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 TMEM150BA6NC51 233 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 TLR3O15455 904 aaKnown RBP13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 MAGEB2O15479 319 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 PQBP1O60828 265 aaKnown RBP13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 MAFO75444 373 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 C22orf31O95567 290 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 ME1P48163 572 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 NPEPPSP55786 919 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 RBL2Q08999 1139 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 PTK7Q13308 1070 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 PTGISQ16647 500 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 RESP18Q5W5W9 173 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 MTHFD1LQ6UB35 978 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 TRMT1LQ7Z2T5 733 aaKnown RBP13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 KCNK18Q7Z418 384 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 RPAINQ86UA6 219 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 PIGOQ8TEQ8 1089 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 LRRC15Q8TF66 581 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 TRAPPC12Q8WVT3 735 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 CALML4Q96GE6 196 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 DHX33Q9H6R0 707 aaKnown RBP13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 GDPD2Q9HCC8 539 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 PDLIM7Q9NR12 457 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 DDX19AQ9NUU7 478 aaKnown RBP13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 TUBE1Q9UJT0 475 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 TBX21Q9UL17 535 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 ATP11BQ9Y2G3 1177 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 PCDHA2Q9Y5H9 948 aa13.14□□□□□ -0.31
TRAPPC12-212ENST00000457845 A0A087WWV3 80 aa13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 SMIM35A0A1B0GVV1 85 aa13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 A0A1W2PQ27 194 aa13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 A0A1W2PQ64 194 aa13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 A0A1W2PQD8 194 aa13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 E9PMD0 336 aa13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 KIAA0355O15063 1070 aa13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 EYA4O95677 639 aa13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 CLTBP09497 229 aa13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 CMA1P23946 247 aa13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 KLRC1P26715 233 aa13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 IGBP1P78318 339 aa13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 KARSQ15046 597 aaKnown RBP13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 TRIM71Q2Q1W2 868 aaKnown RBP13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 MTERF2Q49AM1 385 aa13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 XKR9Q5GH70 373 aa13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 PLA2G4FQ68DD2 849 aa13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 TAF2Q6P1X5 1199 aa13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 TMEM87AQ8NBN3 555 aa13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 DHX38Q92620 1227 aaKnown RBP13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 CEP170P1Q96L14 293 aa13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 BLOC1S4Q9NUP1 217 aa13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 CCDC39Q9UFE4 941 aa13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 DNM3Q9UQ16 869 aa13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 TET1Q8NFU7 2136 aa13.13□□□□□ -0.31
TRAPPC12-212ENST00000457845 A0A087X0B3 334 aa13.12□□□□□ -0.31
TRAPPC12-212ENST00000457845 DGAT1O75907 488 aa13.12□□□□□ -0.31
TRAPPC12-212ENST00000457845 RPLP2P05387 115 aaKnown RBP13.12□□□□□ -0.31
TRAPPC12-212ENST00000457845 PLCG1P19174 1290 aa13.12□□□□□ -0.31
TRAPPC12-212ENST00000457845 TXLNAP40222 546 aa13.12□□□□□ -0.31
TRAPPC12-212ENST00000457845 RFC5P40937 340 aa13.12□□□□□ -0.31
TRAPPC12-212ENST00000457845 TBC1D8BQ0IIM8 1120 aa13.12□□□□□ -0.31
TRAPPC12-212ENST00000457845 NAALADL2Q58DX5 795 aa13.12□□□□□ -0.31
TRAPPC12-212ENST00000457845 EXOC8Q8IYI6 725 aa13.12□□□□□ -0.31
TRAPPC12-212ENST00000457845 SYT2Q8N9I0 419 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC12-212ENST00000457845 CAGE1Q8TC20 777 aa13.12□□□□□ -0.31
TRAPPC12-212ENST00000457845 WNT8BQ93098 351 aa13.12□□□□□ -0.31
TRAPPC12-212ENST00000457845 CDK5RAP3Q96JB5 506 aa13.12□□□□□ -0.31
TRAPPC12-212ENST00000457845 SH2D3AQ9BRG2 576 aa13.12□□□□□ -0.31
TRAPPC12-212ENST00000457845 HPSEQ9Y251 543 aa13.12□□□□□ -0.31
TRAPPC12-212ENST00000457845 PITPNM1O00562 1244 aa13.11□□□□□ -0.31
TRAPPC12-212ENST00000457845 GAS2O43903 313 aaKnown RBP13.11□□□□□ -0.31
TRAPPC12-212ENST00000457845 CAND2O75155 1236 aa13.11□□□□□ -0.31
TRAPPC12-212ENST00000457845 CYP2C9P11712 490 aa13.11□□□□□ -0.31
TRAPPC12-212ENST00000457845 SLC12A3P55017 1021 aa13.11□□□□□ -0.31
TRAPPC12-212ENST00000457845 MKRN4PQ13434 485 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC12-212ENST00000457845 E2F4Q16254 413 aa13.11□□□□□ -0.31
TRAPPC12-212ENST00000457845 CSPP1Q1MSJ5 1256 aa13.11□□□□□ -0.31
TRAPPC12-212ENST00000457845 RUFY4Q6ZNE9 571 aa13.11□□□□□ -0.31
TRAPPC12-212ENST00000457845 CCDC73Q6ZRK6 1079 aa13.11□□□□□ -0.31
TRAPPC12-212ENST00000457845 SH3RF1Q7Z6J0 888 aa13.11□□□□□ -0.31
TRAPPC12-212ENST00000457845 KIAA0319LQ8IZA0 1049 aa13.11□□□□□ -0.31
TRAPPC12-212ENST00000457845 NME8Q8N427 588 aa13.11□□□□□ -0.31
TRAPPC12-212ENST00000457845 ZBTB10Q96DT7 871 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms