RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 CAPN6Q9Y6Q1 641 aa17.74■□□□□ 0.43
LSS-205ENST00000457828 CNTNAP5Q8WYK1 1306 aa17.74■□□□□ 0.43
LSS-205ENST00000457828 C19orf81C9J6K1 198 aa17.74■□□□□ 0.43
LSS-205ENST00000457828 IFNAR2P48551 515 aa17.74■□□□□ 0.43
LSS-205ENST00000457828 CLNS1AP54105 237 aaKnown RBP17.74■□□□□ 0.43
LSS-205ENST00000457828 ZNF543Q08ER8 600 aa17.74■□□□□ 0.43
LSS-205ENST00000457828 PKN1Q16512 942 aa17.74■□□□□ 0.43
LSS-205ENST00000457828 Q3C1V9 767 aa17.74■□□□□ 0.43
LSS-205ENST00000457828 HOOK3Q86VS8 718 aa17.74■□□□□ 0.43
LSS-205ENST00000457828 SPATS2Q86XZ4 545 aaKnown RBP17.74■□□□□ 0.43
LSS-205ENST00000457828 RNF169Q8NCN4 708 aa17.74■□□□□ 0.43
LSS-205ENST00000457828 PCDHA6Q9UN73 950 aa17.74■□□□□ 0.43
LSS-205ENST00000457828 PCDHA8Q9Y5H6 950 aa17.74■□□□□ 0.43
LSS-205ENST00000457828 A0A1W2PRG0 241 aa17.73■□□□□ 0.43
LSS-205ENST00000457828 ANKRD62A6NC57 917 aa17.73■□□□□ 0.43
LSS-205ENST00000457828 KCNB1Q14721 858 aa17.73■□□□□ 0.43
LSS-205ENST00000457828 LLGL1Q15334 1064 aa17.73■□□□□ 0.43
LSS-205ENST00000457828 AMIGO3Q86WK7 504 aa17.73■□□□□ 0.43
LSS-205ENST00000457828 LPAR1Q92633 364 aa17.73■□□□□ 0.43
LSS-205ENST00000457828 ATP6V0A1Q93050 837 aa17.73■□□□□ 0.43
LSS-205ENST00000457828 GLIS2Q9BZE0 524 aaPredicted RBP17.73■□□□□ 0.43
LSS-205ENST00000457828 WDR11Q9BZH6 1224 aa17.73■□□□□ 0.43
LSS-205ENST00000457828 RBM12Q9NTZ6 932 aaKnown RBP17.73■□□□□ 0.43
LSS-205ENST00000457828 CACNA1FO60840 1977 aa17.73■□□□□ 0.43
LSS-205ENST00000457828 POLGP54098 1239 aaPredicted RBP17.73■□□□□ 0.43
LSS-205ENST00000457828 EXOC3L4Q17RC7 722 aa17.73■□□□□ 0.43
LSS-205ENST00000457828 APBB1IPQ7Z5R6 666 aaPredicted RBP17.73■□□□□ 0.43
LSS-205ENST00000457828 EXOC7Q9UPT5 735 aa17.73■□□□□ 0.43
LSS-205ENST00000457828 TCRBV5S4A2TA0A5A2 114 aa17.73■□□□□ 0.43
LSS-205ENST00000457828 SPOPO43791 374 aa17.73■□□□□ 0.43
LSS-205ENST00000457828 GNA14O95837 355 aa17.73■□□□□ 0.43
LSS-205ENST00000457828 SERPING1P05155 500 aa17.73■□□□□ 0.43
LSS-205ENST00000457828 STAT1P42224 750 aa17.73■□□□□ 0.43
LSS-205ENST00000457828 FAM160B1Q5W0V3 765 aa17.73■□□□□ 0.43
LSS-205ENST00000457828 PROCA1Q8NCQ7 364 aaPredicted RBP17.73■□□□□ 0.43
LSS-205ENST00000457828 TMEM260Q9NX78 707 aa17.73■□□□□ 0.43
LSS-205ENST00000457828 EXOC3O60645 756 aa17.72■□□□□ 0.43
LSS-205ENST00000457828 DHX9Q08211 1270 aaKnown RBP17.72■□□□□ 0.43
LSS-205ENST00000457828 DENND2CQ68D51 928 aa17.72■□□□□ 0.43
LSS-205ENST00000457828 ACER1Q8TDN7 264 aa17.72■□□□□ 0.43
LSS-205ENST00000457828 LARSQ9P2J5 1176 aaKnown RBP17.72■□□□□ 0.43
LSS-205ENST00000457828 TNPO2O14787 897 aaKnown RBP17.72■□□□□ 0.43
LSS-205ENST00000457828 WDR46O15213 610 aaKnown RBP17.72■□□□□ 0.43
LSS-205ENST00000457828 EIF3HO15372 352 aaKnown RBP eCLIP17.72■□□□□ 0.436e-7■□□□□ 9.6
LSS-205ENST00000457828 RGS16O15492 202 aaPredicted RBP17.72■□□□□ 0.43
LSS-205ENST00000457828 RHOBTB3O94955 611 aa17.72■□□□□ 0.43
LSS-205ENST00000457828 GRIK5Q16478 980 aa17.72■□□□□ 0.43
LSS-205ENST00000457828 NKX2-3Q8TAU0 364 aa17.72■□□□□ 0.43
LSS-205ENST00000457828 TBC1D31Q96DN5 1066 aa17.72■□□□□ 0.43
LSS-205ENST00000457828 ACAD9Q9H845 621 aa17.72■□□□□ 0.43
LSS-205ENST00000457828 SEPT9Q9UHD8 586 aaPredicted RBP17.72■□□□□ 0.43
LSS-205ENST00000457828 RNF225M0QZC1 329 aaPredicted RBP17.72■□□□□ 0.43
LSS-205ENST00000457828 BUB1BO60566 1050 aaPredicted RBP17.72■□□□□ 0.43
LSS-205ENST00000457828 GIMAP8Q8ND71 665 aaPredicted RBP17.72■□□□□ 0.43
LSS-205ENST00000457828 TTC16Q8NEE8 873 aa17.72■□□□□ 0.43
LSS-205ENST00000457828 NSUN6Q8TEA1 469 aaKnown RBP17.72■□□□□ 0.43
LSS-205ENST00000457828 VPS33BQ9H267 617 aa17.72■□□□□ 0.43
LSS-205ENST00000457828 RIC8AQ9NPQ8 531 aa17.72■□□□□ 0.43
LSS-205ENST00000457828 RNF14Q9UBS8 474 aa17.72■□□□□ 0.43
LSS-205ENST00000457828 STK17AQ9UEE5 414 aa17.72■□□□□ 0.43
LSS-205ENST00000457828 FAM208AQ9UK61 1670 aaKnown RBP17.72■□□□□ 0.43
LSS-205ENST00000457828 PDS5AQ29RF7 1337 aaKnown RBP17.72■□□□□ 0.43
LSS-205ENST00000457828 FRMD3A2A2Y4 597 aa17.72■□□□□ 0.43
LSS-205ENST00000457828 MEIS1O00470 390 aa17.72■□□□□ 0.43
LSS-205ENST00000457828 CALUO43852 315 aaPredicted RBP17.72■□□□□ 0.43
LSS-205ENST00000457828 CLTAP09496 248 aa17.72■□□□□ 0.43
LSS-205ENST00000457828 CARSP49589 748 aaKnown RBP17.72■□□□□ 0.43
LSS-205ENST00000457828 SYCE1Q8N0S2 351 aa17.72■□□□□ 0.43
LSS-205ENST00000457828 NAP1L3Q99457 506 aaPredicted RBP17.72■□□□□ 0.43
LSS-205ENST00000457828 RABGAP1Q9Y3P9 1069 aa17.72■□□□□ 0.43
LSS-205ENST00000457828 LRRIQ4A6NIV6 560 aa17.71■□□□□ 0.43
LSS-205ENST00000457828 PGRMC1O00264 195 aaKnown RBP17.71■□□□□ 0.43
LSS-205ENST00000457828 CALRP27797 417 aaKnown RBP17.71■□□□□ 0.43
LSS-205ENST00000457828 TMOD1P28289 359 aa17.71■□□□□ 0.43
LSS-205ENST00000457828 LRRC63Q05C16 580 aa17.71■□□□□ 0.43
LSS-205ENST00000457828 PDXDC2PQ6P474 469 aa17.71■□□□□ 0.43
LSS-205ENST00000457828 UNC13DQ70J99 1090 aa17.71■□□□□ 0.43
LSS-205ENST00000457828 WHAMMQ8TF30 809 aa17.71■□□□□ 0.43
LSS-205ENST00000457828 EHD4Q9H223 541 aa17.71■□□□□ 0.43
LSS-205ENST00000457828 CAP2P40123 477 aa17.71■□□□□ 0.43
LSS-205ENST00000457828 SEL1L2Q5TEA6 688 aa17.71■□□□□ 0.43
LSS-205ENST00000457828 STMN4Q9H169 189 aaPredicted RBP17.71■□□□□ 0.43
LSS-205ENST00000457828 GBA2Q9HCG7 927 aaPredicted RBP17.71■□□□□ 0.43
LSS-205ENST00000457828 SEC23AQ15436 765 aa17.71■□□□□ 0.43
LSS-205ENST00000457828 STXBP2Q15833 593 aa17.71■□□□□ 0.43
LSS-205ENST00000457828 FAM178BQ8IXR5 827 aa17.71■□□□□ 0.43
LSS-205ENST00000457828 CCDC105Q8IYK2 499 aa17.71■□□□□ 0.43
LSS-205ENST00000457828 SCYL3Q8IZE3 742 aa17.71■□□□□ 0.43
LSS-205ENST00000457828 HDAC7Q8WUI4 952 aa17.71■□□□□ 0.43
LSS-205ENST00000457828 TEX13BQ9BXU2 312 aa17.71■□□□□ 0.43
LSS-205ENST00000457828 DDX47Q9H0S4 455 aaKnown RBP17.71■□□□□ 0.43
LSS-205ENST00000457828 ARL8AQ96BM9 186 aa17.7■□□□□ 0.42
LSS-205ENST00000457828 DNAJC7Q99615 494 aa17.7■□□□□ 0.42
LSS-205ENST00000457828 CCSER1Q9C0I3 900 aa17.7■□□□□ 0.42
LSS-205ENST00000457828 SYNCQ9H7C4 482 aa17.7■□□□□ 0.42
LSS-205ENST00000457828 FBXO28Q9NVF7 368 aa17.7■□□□□ 0.42
LSS-205ENST00000457828 WNT7AO00755 349 aa17.7■□□□□ 0.42
LSS-205ENST00000457828 FDX1P10109 184 aa17.7■□□□□ 0.42
LSS-205ENST00000457828 ECE1P42892 770 aa17.7■□□□□ 0.42
LSS-205ENST00000457828 SEC24CP53992 1094 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms