RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 CPLX1O14810 134 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 NMT2O60551 498 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 SKAP2O75563 359 aaPredicted RBP7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 FLOT1O75955 427 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 ALDH2P05091 517 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 RXRAP19793 462 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 RPS12P25398 132 aaKnown RBP7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 ERCC5P28715 1186 aaPredicted RBP7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 SHMT1P34896 483 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 MATR3P43243 847 aaKnown RBP eCLIP7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 ZNF280AP59817 542 aaPredicted RBP7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 LRMPQ12912 555 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 ZBTB17Q13105 803 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 PICALMQ13492 652 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 TUBA3CQ13748 450 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 SEPT6Q14141 434 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 CIAPIN1Q6FI81 312 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 RBM43Q6ZSC3 357 aaKnown RBP7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 SH3BP5LQ7L8J4 393 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 NANOGNBQ7Z5D8 188 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 RAB11FIP4Q86YS3 637 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 CRACR2BQ8N4Y2 399 aaPredicted RBP7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 ESX1Q8N693 406 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 RASSF8Q8NHQ8 419 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 UHMK1Q8TAS1 419 aaKnown RBP7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 ENOX1Q8TC92 643 aaKnown RBP7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 FRS2Q8WU20 508 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 NSMCE1Q8WV22 266 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 CTNNBL1Q8WYA6 563 aaPredicted RBP7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 ITPKCQ96DU7 683 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 MS4A3Q96HJ5 214 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 PRMT6Q96LA8 375 aaPredicted RBP7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 RNPC3Q96LT9 517 aaKnown RBP7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 CTAGE1Q96RT6 745 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 SH3GL2Q99962 352 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 SPOCK3Q9BQ16 436 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 MYL10Q9BUA6 226 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 TMEM106CQ9BVX2 250 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 SLC7A5P2Q9GIP4 190 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 YIPF3Q9GZM5 350 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 DNAJC18Q9H819 358 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 MKNK2Q9HBH9 465 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 ZNF304Q9HCX3 659 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 WDR70Q9NW82 654 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 TRMT1Q9NXH9 659 aaKnown RBP7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 NOP53Q9NZM5 478 aaKnown RBP7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 SERPINB13Q9UIV8 391 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 HDAC9Q9UKV0 1011 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 TMCC3Q9ULS5 477 aa7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 NOSIPQ9Y314 301 aaKnown RBP7.45□□□□□ -1.22
CUBNP3-201ENST00000457461 ATAD5Q96QE3 1844 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 VPS37CA5D8V6 355 aaPredicted RBP7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 IQCA1LA6NCM1 817 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 HLA-DOAP06340 250 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 TSPY3P0CV98 308 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 TSPY8P0CW00 308 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 GHRP10912 638 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 SERPINB8P50452 374 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 PDE1BQ01064 536 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 RASSF7Q02833 373 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 WASHC5Q12768 1159 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 SEPT2Q15019 361 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 TSR1Q2NL82 804 aaKnown RBP7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 GALNT17Q6IS24 598 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 TMTC3Q6ZXV5 915 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 ZFPM1Q8IX07 1006 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 DRC7Q8IY82 874 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 CCDC13Q8IYE1 715 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 SAMD14Q8IZD0 417 aaPredicted RBP7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 ZNF444Q8N0Y2 327 aaPredicted RBP7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 JDP2Q8WYK2 163 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 MAML1Q92585 1016 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 DPF2Q92785 391 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 C8orf76Q96K31 380 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 CLIC6Q96NY7 704 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 RNF26Q9BY78 433 aaPredicted RBP7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 TNMDQ9H2S6 317 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 SCHIP1Q9P0W5 487 aaPredicted RBP7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 KIAA1468Q9P260 1216 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 PPP1R1BQ9UD71 204 aaPredicted RBP7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 TTC7AQ9ULT0 858 aaPredicted RBP7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 SCINQ9Y6U3 715 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 CNTNAP1P78357 1384 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 CNTNAP5Q8WYK1 1306 aa7.44□□□□□ -1.22
CUBNP3-201ENST00000457461 CCDC194A0A1B0GVG4 234 aa7.43□□□□□ -1.22
CUBNP3-201ENST00000457461 DDTLA6NHG4 134 aaPredicted RBP7.43□□□□□ -1.22
CUBNP3-201ENST00000457461 E7ENQ6 273 aa7.43□□□□□ -1.22
CUBNP3-201ENST00000457461 BOLA2-SMG1P6H3BVE0 249 aa7.43□□□□□ -1.22
CUBNP3-201ENST00000457461 NDUFAB1O14561 156 aa7.43□□□□□ -1.22
CUBNP3-201ENST00000457461 SGTAO43765 313 aa7.43□□□□□ -1.22
CUBNP3-201ENST00000457461 KIF5BP33176 963 aa7.43□□□□□ -1.22
CUBNP3-201ENST00000457461 CTCFP49711 727 aaPredicted RBP7.43□□□□□ -1.22
CUBNP3-201ENST00000457461 TNIP1Q15025 636 aa7.43□□□□□ -1.22
CUBNP3-201ENST00000457461 PPP1R15BQ5SWA1 713 aa7.43□□□□□ -1.22
CUBNP3-201ENST00000457461 NCAPH2Q6IBW4 605 aa7.43□□□□□ -1.22
CUBNP3-201ENST00000457461 TATDN1Q6P1N9 297 aa7.43□□□□□ -1.22
CUBNP3-201ENST00000457461 WDR93Q6P2C0 686 aa7.43□□□□□ -1.22
CUBNP3-201ENST00000457461 POTEEQ6S8J3 1075 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms