RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 NRBP2Q9NSY0 501 aa18.28■□□□□ 0.52
CPSF6-203ENST00000456847 INSL6Q9Y581 213 aa18.28■□□□□ 0.52
CPSF6-203ENST00000456847 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.27■□□□□ 0.52
CPSF6-203ENST00000456847 ZBTB42B2RXF5 422 aa18.27■□□□□ 0.52
CPSF6-203ENST00000456847 C22orf31O95567 290 aa18.27■□□□□ 0.52
CPSF6-203ENST00000456847 MMP1P03956 469 aa18.27■□□□□ 0.52
CPSF6-203ENST00000456847 CD52P31358 61 aa18.27■□□□□ 0.52
CPSF6-203ENST00000456847 ADGRE1Q14246 886 aa18.27■□□□□ 0.52
CPSF6-203ENST00000456847 PPP4R3AQ6IN85 833 aa18.27■□□□□ 0.52
CPSF6-203ENST00000456847 MICALL1Q8N3F8 863 aa18.27■□□□□ 0.52
CPSF6-203ENST00000456847 YME1L1Q96TA2 773 aa18.27■□□□□ 0.52
CPSF6-203ENST00000456847 FAM205CA6NFA0 338 aa18.27■□□□□ 0.51
CPSF6-203ENST00000456847 ZNF862O60290 1169 aa18.27■□□□□ 0.51
CPSF6-203ENST00000456847 PAK2Q13177 524 aa18.27■□□□□ 0.51
CPSF6-203ENST00000456847 EARS2Q5JPH6 523 aaKnown RBP18.27■□□□□ 0.51
CPSF6-203ENST00000456847 KRT40Q6A162 431 aa18.27■□□□□ 0.51
CPSF6-203ENST00000456847 DIS3L2Q8IYB7 885 aaKnown RBP18.27■□□□□ 0.51
CPSF6-203ENST00000456847 USP38Q8NB14 1042 aa18.27■□□□□ 0.51
CPSF6-203ENST00000456847 PPP1R16BQ96T49 567 aa18.27■□□□□ 0.51
CPSF6-203ENST00000456847 KIF2CQ99661 725 aa18.27■□□□□ 0.51
CPSF6-203ENST00000456847 SEPT9Q9UHD8 586 aaPredicted RBP18.27■□□□□ 0.51
CPSF6-203ENST00000456847 RFXAPO00287 272 aa18.26■□□□□ 0.51
CPSF6-203ENST00000456847 RBM25P49756 843 aaKnown RBP18.26■□□□□ 0.51
CPSF6-203ENST00000456847 POTEDQ86YR6 584 aa18.26■□□□□ 0.51
CPSF6-203ENST00000456847 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.26■□□□□ 0.51
CPSF6-203ENST00000456847 FAM20AQ96MK3 541 aa18.26■□□□□ 0.51
CPSF6-203ENST00000456847 AGO3Q9H9G7 860 aaKnown RBP18.26■□□□□ 0.51
CPSF6-203ENST00000456847 SH2B1Q9NRF2 756 aaPredicted RBP18.26■□□□□ 0.51
CPSF6-203ENST00000456847 MTUS1Q9ULD2 1270 aa18.26■□□□□ 0.51
CPSF6-203ENST00000456847 SQORQ9Y6N5 450 aa18.26■□□□□ 0.51
CPSF6-203ENST00000456847 NLRC5Q86WI3 1866 aa18.25■□□□□ 0.51
CPSF6-203ENST00000456847 MAGEB2O15479 319 aa18.25■□□□□ 0.51
CPSF6-203ENST00000456847 GTPBP6O43824 516 aaPredicted RBP18.25■□□□□ 0.51
CPSF6-203ENST00000456847 GUCY1B3Q02153 619 aa18.25■□□□□ 0.51
CPSF6-203ENST00000456847 SAFBQ15424 915 aaKnown RBP eCLIP18.25■□□□□ 0.51
CPSF6-203ENST00000456847 SPRED2Q7Z698 418 aa18.25■□□□□ 0.51
CPSF6-203ENST00000456847 KIAA0319LQ8IZA0 1049 aa18.25■□□□□ 0.51
CPSF6-203ENST00000456847 TOP1MTQ969P6 601 aa18.25■□□□□ 0.51
CPSF6-203ENST00000456847 MAP7D2Q96T17 732 aa18.25■□□□□ 0.51
CPSF6-203ENST00000456847 LLPHQ9BRT6 129 aaKnown RBP18.25■□□□□ 0.51
CPSF6-203ENST00000456847 KCNMB3Q9NPA1 279 aa18.25■□□□□ 0.51
CPSF6-203ENST00000456847 KDM3AQ9Y4C1 1321 aa18.25■□□□□ 0.51
CPSF6-203ENST00000456847 LINC01553A4QN01 128 aa18.25■□□□□ 0.51
CPSF6-203ENST00000456847 EPOPA6NHQ4 379 aa18.25■□□□□ 0.51
CPSF6-203ENST00000456847 BTBD18B2RXH4 712 aa18.25■□□□□ 0.51
CPSF6-203ENST00000456847 BAG4O95429 457 aaKnown RBP18.25■□□□□ 0.51
CPSF6-203ENST00000456847 CLCN3P51790 818 aa18.25■□□□□ 0.51
CPSF6-203ENST00000456847 RABEP1Q15276 862 aa18.25■□□□□ 0.51
CPSF6-203ENST00000456847 CCDC85BQ15834 202 aaPredicted RBP18.25■□□□□ 0.51
CPSF6-203ENST00000456847 BANK1Q8NDB2 785 aa18.25■□□□□ 0.51
CPSF6-203ENST00000456847 TNFRSF25Q93038 417 aa18.25■□□□□ 0.51
CPSF6-203ENST00000456847 C8orf76Q96K31 380 aa18.25■□□□□ 0.51
CPSF6-203ENST00000456847 TGS1Q96RS0 853 aaKnown RBP18.25■□□□□ 0.51
CPSF6-203ENST00000456847 AKT3Q9Y243 479 aa18.25■□□□□ 0.51
CPSF6-203ENST00000456847 TBX3O15119 743 aa18.24■□□□□ 0.51
CPSF6-203ENST00000456847 VTNP04004 478 aa18.24■□□□□ 0.51
CPSF6-203ENST00000456847 TMOD1P28289 359 aa18.24■□□□□ 0.51
CPSF6-203ENST00000456847 HTRA4P83105 476 aaPredicted RBP18.24■□□□□ 0.51
CPSF6-203ENST00000456847 MTERF2Q49AM1 385 aa18.24■□□□□ 0.51
CPSF6-203ENST00000456847 EFCAB12Q6NXP0 572 aa18.24■□□□□ 0.51
CPSF6-203ENST00000456847 B3GNT9Q6UX72 402 aa18.24■□□□□ 0.51
CPSF6-203ENST00000456847 LRRC71Q8N4P6 559 aa18.24■□□□□ 0.51
CPSF6-203ENST00000456847 FAM184AQ8NB25 1140 aa18.24■□□□□ 0.51
CPSF6-203ENST00000456847 FTHL17Q9BXU8 183 aa18.24■□□□□ 0.51
CPSF6-203ENST00000456847 PADI3Q9ULW8 664 aa18.24■□□□□ 0.51
CPSF6-203ENST00000456847 HMGN5P82970 282 aaKnown RBP18.23■□□□□ 0.51
CPSF6-203ENST00000456847 TBC1D8BQ0IIM8 1120 aa18.23■□□□□ 0.51
CPSF6-203ENST00000456847 NFX1Q12986 1120 aaKnown RBP18.23■□□□□ 0.51
CPSF6-203ENST00000456847 PPP2R5CQ13362 524 aa18.23■□□□□ 0.51
CPSF6-203ENST00000456847 KIZQ2M2Z5 673 aa18.23■□□□□ 0.51
CPSF6-203ENST00000456847 TMEM266Q2M3C6 531 aa18.23■□□□□ 0.51
CPSF6-203ENST00000456847 XKR3Q5GH77 459 aa18.23■□□□□ 0.51
CPSF6-203ENST00000456847 VAV3Q9UKW4 847 aa18.23■□□□□ 0.51
CPSF6-203ENST00000456847 COL6A3P12111 3177 aa18.23■□□□□ 0.51
CPSF6-203ENST00000456847 ST18O60284 1047 aa18.23■□□□□ 0.51
CPSF6-203ENST00000456847 RPS6KA5O75582 802 aa18.23■□□□□ 0.51
CPSF6-203ENST00000456847 IBSPP21815 317 aaPredicted RBP18.23■□□□□ 0.51
CPSF6-203ENST00000456847 ODR4Q5SWX8 454 aa18.23■□□□□ 0.51
CPSF6-203ENST00000456847 NCAPH2Q6IBW4 605 aa18.23■□□□□ 0.51
CPSF6-203ENST00000456847 SLFN12Q8IYM2 578 aa18.23■□□□□ 0.51
CPSF6-203ENST00000456847 GDPD5Q8WTR4 605 aa18.23■□□□□ 0.51
CPSF6-203ENST00000456847 SCLT1Q96NL6 688 aa18.23■□□□□ 0.51
CPSF6-203ENST00000456847 OSMRQ99650 979 aa18.23■□□□□ 0.51
CPSF6-203ENST00000456847 SUGCTQ9HAC7 445 aa18.23■□□□□ 0.51
CPSF6-203ENST00000456847 RALGAPA2Q2PPJ7 1873 aa18.23■□□□□ 0.51
CPSF6-203ENST00000456847 EML1O00423 815 aa18.22■□□□□ 0.51
CPSF6-203ENST00000456847 ENPP3O14638 875 aa18.22■□□□□ 0.51
CPSF6-203ENST00000456847 DKC1O60832 514 aaKnown RBP eCLIP18.22■□□□□ 0.51
CPSF6-203ENST00000456847 ERVK-21P61565 698 aa18.22■□□□□ 0.51
CPSF6-203ENST00000456847 PSMC5P62195 406 aa18.22■□□□□ 0.51
CPSF6-203ENST00000456847 SP7Q8TDD2 431 aaPredicted RBP18.22■□□□□ 0.51
CPSF6-203ENST00000456847 CDHR5Q9HBB8 845 aa18.22■□□□□ 0.51
CPSF6-203ENST00000456847 NOC2LQ9Y3T9 749 aaKnown RBP18.22■□□□□ 0.51
CPSF6-203ENST00000456847 COL4A6Q14031 1691 aa18.22■□□□□ 0.51
CPSF6-203ENST00000456847 CDH23Q9H251 3354 aa18.22■□□□□ 0.51
CPSF6-203ENST00000456847 DDX11L8A8MPP1 907 aa18.21■□□□□ 0.51
CPSF6-203ENST00000456847 CRYBB1P53674 252 aaPredicted RBP18.21■□□□□ 0.51
CPSF6-203ENST00000456847 GRB10Q13322 594 aa18.21■□□□□ 0.51
CPSF6-203ENST00000456847 GNL2Q13823 731 aaKnown RBP18.21■□□□□ 0.51
CPSF6-203ENST00000456847 CALCRLQ16602 461 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms