RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 TLL1O43897 1013 aa20.31■□□□□ 0.84
PDLIM2-215ENST00000456545 ZNF862O60290 1169 aa20.31■□□□□ 0.84
PDLIM2-215ENST00000456545 MCM7P33993 719 aa20.31■□□□□ 0.84
PDLIM2-215ENST00000456545 TXKP42681 527 aa20.31■□□□□ 0.84
PDLIM2-215ENST00000456545 PSMC5P62195 406 aa20.31■□□□□ 0.84
PDLIM2-215ENST00000456545 UGCGQ16739 394 aa20.31■□□□□ 0.84
PDLIM2-215ENST00000456545 XKR3Q5GH77 459 aa20.31■□□□□ 0.84
PDLIM2-215ENST00000456545 MCTP1Q6DN14 999 aa20.31■□□□□ 0.84
PDLIM2-215ENST00000456545 HAS1Q92839 578 aa20.31■□□□□ 0.84
PDLIM2-215ENST00000456545 CELF4Q9BZC1 486 aaKnown RBP20.31■□□□□ 0.84
PDLIM2-215ENST00000456545 EML1O00423 815 aa20.3■□□□□ 0.84
PDLIM2-215ENST00000456545 P4HBP07237 508 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-215ENST00000456545 GJB2P29033 226 aa20.3■□□□□ 0.84
PDLIM2-215ENST00000456545 QARSP47897 775 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-215ENST00000456545 MGAT3Q09327 533 aa20.3■□□□□ 0.84
PDLIM2-215ENST00000456545 TBC1D8BQ0IIM8 1120 aa20.3■□□□□ 0.84
PDLIM2-215ENST00000456545 EPHA7Q15375 998 aa20.3■□□□□ 0.84
PDLIM2-215ENST00000456545 TCTN1Q2MV58 587 aa20.3■□□□□ 0.84
PDLIM2-215ENST00000456545 MTERF2Q49AM1 385 aa20.3■□□□□ 0.84
PDLIM2-215ENST00000456545 EFCAB12Q6NXP0 572 aa20.3■□□□□ 0.84
PDLIM2-215ENST00000456545 B3GNT9Q6UX72 402 aa20.3■□□□□ 0.84
PDLIM2-215ENST00000456545 NOSTRINQ8IVI9 506 aa20.3■□□□□ 0.84
PDLIM2-215ENST00000456545 MYOCDQ8IZQ8 938 aa20.3■□□□□ 0.84
PDLIM2-215ENST00000456545 USP38Q8NB14 1042 aa20.3■□□□□ 0.84
PDLIM2-215ENST00000456545 MAP7D2Q96T17 732 aa20.3■□□□□ 0.84
PDLIM2-215ENST00000456545 TTYH1Q9H313 450 aaPredicted RBP20.3■□□□□ 0.84
PDLIM2-215ENST00000456545 SUGCTQ9HAC7 445 aa20.3■□□□□ 0.84
PDLIM2-215ENST00000456545 VAV3Q9UKW4 847 aa20.3■□□□□ 0.84
PDLIM2-215ENST00000456545 WDR81Q562E7 1941 aa20.29■□□□□ 0.84
PDLIM2-215ENST00000456545 ZBTB42B2RXF5 422 aa20.29■□□□□ 0.84
PDLIM2-215ENST00000456545 C22orf31O95567 290 aa20.29■□□□□ 0.84
PDLIM2-215ENST00000456545 MYOGP15173 224 aa20.29■□□□□ 0.84
PDLIM2-215ENST00000456545 DEFB103AP81534 67 aa20.29■□□□□ 0.84
PDLIM2-215ENST00000456545 LPIN1Q14693 890 aa20.29■□□□□ 0.84
PDLIM2-215ENST00000456545 ZNF174Q15697 407 aa20.29■□□□□ 0.84
PDLIM2-215ENST00000456545 FBXO47Q5MNV8 452 aa20.29■□□□□ 0.84
PDLIM2-215ENST00000456545 PPP2R2DQ66LE6 453 aa20.29■□□□□ 0.84
PDLIM2-215ENST00000456545 FAM117BQ6P1L5 589 aa20.29■□□□□ 0.84
PDLIM2-215ENST00000456545 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.29■□□□□ 0.84
PDLIM2-215ENST00000456545 TSHZ1Q6ZSZ6 1077 aa20.29■□□□□ 0.84
PDLIM2-215ENST00000456545 KIAA0319LQ8IZA0 1049 aa20.29■□□□□ 0.84
PDLIM2-215ENST00000456545 OSBPL7Q9BZF2 842 aa20.29■□□□□ 0.84
PDLIM2-215ENST00000456545 TTC12Q9H892 705 aaPredicted RBP20.29■□□□□ 0.84
PDLIM2-215ENST00000456545 AKT3Q9Y243 479 aa20.29■□□□□ 0.84
PDLIM2-215ENST00000456545 YBX2Q9Y2T7 364 aaKnown RBP20.29■□□□□ 0.84
PDLIM2-215ENST00000456545 EVPLQ92817 2033 aa20.29■□□□□ 0.84
PDLIM2-215ENST00000456545 UPP2O95045 317 aa20.28■□□□□ 0.84
PDLIM2-215ENST00000456545 DNM2P50570 870 aa20.28■□□□□ 0.84
PDLIM2-215ENST00000456545 ODR4Q5SWX8 454 aa20.28■□□□□ 0.84
PDLIM2-215ENST00000456545 PPP1R16BQ96T49 567 aa20.28■□□□□ 0.84
PDLIM2-215ENST00000456545 CDX2Q99626 313 aaPredicted RBP20.28■□□□□ 0.84
PDLIM2-215ENST00000456545 NIFKQ9BYG3 293 aaKnown RBP20.28■□□□□ 0.84
PDLIM2-215ENST00000456545 SQORQ9Y6N5 450 aa20.28■□□□□ 0.84
PDLIM2-215ENST00000456545 VTNP04004 478 aa20.27■□□□□ 0.84
PDLIM2-215ENST00000456545 CLCN3P51790 818 aa20.27■□□□□ 0.84
PDLIM2-215ENST00000456545 NFX1Q12986 1120 aaKnown RBP20.27■□□□□ 0.84
PDLIM2-215ENST00000456545 PAK2Q13177 524 aa20.27■□□□□ 0.84
PDLIM2-215ENST00000456545 TTC38Q5R3I4 469 aa20.27■□□□□ 0.84
PDLIM2-215ENST00000456545 OTUD6AQ7L8S5 288 aa20.27■□□□□ 0.84
PDLIM2-215ENST00000456545 TMCO2Q7Z6W1 182 aaPredicted RBP20.27■□□□□ 0.84
PDLIM2-215ENST00000456545 TPH2Q8IWU9 490 aa20.27■□□□□ 0.84
PDLIM2-215ENST00000456545 LRRC71Q8N4P6 559 aa20.27■□□□□ 0.84
PDLIM2-215ENST00000456545 DYDC2Q96IM9 177 aa20.27■□□□□ 0.84
PDLIM2-215ENST00000456545 SCLT1Q96NL6 688 aa20.27■□□□□ 0.84
PDLIM2-215ENST00000456545 GUCD1Q96NT3 240 aa20.27■□□□□ 0.84
PDLIM2-215ENST00000456545 GBF1Q92538 1859 aa20.26■□□□□ 0.83
PDLIM2-215ENST00000456545 CA3P07451 260 aa20.26■□□□□ 0.83
PDLIM2-215ENST00000456545 CD52P31358 61 aa20.26■□□□□ 0.83
PDLIM2-215ENST00000456545 TRAPPC10P48553 1259 aa20.26■□□□□ 0.83
PDLIM2-215ENST00000456545 ORC2Q13416 577 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-215ENST00000456545 GRIN2CQ14957 1233 aa20.26■□□□□ 0.83
PDLIM2-215ENST00000456545 LARP1BQ659C4 914 aaKnown RBP20.26■□□□□ 0.83
PDLIM2-215ENST00000456545 MYLIPQ8WY64 445 aa20.26■□□□□ 0.83
PDLIM2-215ENST00000456545 GAS2L1Q99501 681 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-215ENST00000456545 RAD9AQ99638 391 aa20.26■□□□□ 0.83
PDLIM2-215ENST00000456545 JPH2Q9BR39 696 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-215ENST00000456545 SH2D3AQ9BRG2 576 aa20.26■□□□□ 0.83
PDLIM2-215ENST00000456545 ZSWIM4Q9H7M6 989 aa20.26■□□□□ 0.83
PDLIM2-215ENST00000456545 RGL1Q9NZL6 768 aa20.26■□□□□ 0.83
PDLIM2-215ENST00000456545 STXBP5LQ9Y2K9 1186 aa20.26■□□□□ 0.83
PDLIM2-215ENST00000456545 KDM3AQ9Y4C1 1321 aa20.26■□□□□ 0.83
PDLIM2-215ENST00000456545 TMEM150BA6NC51 233 aa20.25■□□□□ 0.83
PDLIM2-215ENST00000456545 RBAK-RBAKDNI3L0D1 243 aa20.25■□□□□ 0.83
PDLIM2-215ENST00000456545 WNT7AO00755 349 aa20.25■□□□□ 0.83
PDLIM2-215ENST00000456545 RPS6KA5O75582 802 aa20.25■□□□□ 0.83
PDLIM2-215ENST00000456545 GJB5O95377 273 aa20.25■□□□□ 0.83
PDLIM2-215ENST00000456545 U2AF2P26368 475 aaKnown RBP eCLIP20.25■□□□□ 0.83
PDLIM2-215ENST00000456545 CRYBB1P53674 252 aaPredicted RBP20.25■□□□□ 0.83
PDLIM2-215ENST00000456545 CYP4A11Q02928 519 aa20.25■□□□□ 0.83
PDLIM2-215ENST00000456545 CTTNQ14247 550 aaKnown RBP20.25■□□□□ 0.83
PDLIM2-215ENST00000456545 KIZQ2M2Z5 673 aa20.25■□□□□ 0.83
PDLIM2-215ENST00000456545 EXOC8Q8IYI6 725 aa20.25■□□□□ 0.83
PDLIM2-215ENST00000456545 ZNF710Q8N1W2 664 aa20.25■□□□□ 0.83
PDLIM2-215ENST00000456545 CEP170P1Q96L14 293 aa20.25■□□□□ 0.83
PDLIM2-215ENST00000456545 MTMR9Q96QG7 549 aa20.25■□□□□ 0.83
PDLIM2-215ENST00000456545 EIF2AK1Q9BQI3 630 aaKnown RBP20.25■□□□□ 0.83
PDLIM2-215ENST00000456545 LXNQ9BS40 222 aa20.25■□□□□ 0.83
PDLIM2-215ENST00000456545 FTHL17Q9BXU8 183 aa20.25■□□□□ 0.83
PDLIM2-215ENST00000456545 AGO3Q9H9G7 860 aaKnown RBP20.25■□□□□ 0.83
PDLIM2-215ENST00000456545 PADI3Q9ULW8 664 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms