RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 GRB10Q13322 594 aa20.16■□□□□ 0.82
MSH6-207ENST00000456246 CCDC85BQ15834 202 aaPredicted RBP20.16■□□□□ 0.82
MSH6-207ENST00000456246 NEK8Q86SG6 692 aa20.16■□□□□ 0.82
MSH6-207ENST00000456246 NRBP2Q9NSY0 501 aa20.16■□□□□ 0.82
MSH6-207ENST00000456246 DDX25Q9UHL0 483 aaKnown RBP20.16■□□□□ 0.82
MSH6-207ENST00000456246 COL4A4P53420 1690 aaPredicted RBP20.16■□□□□ 0.82
MSH6-207ENST00000456246 ZBTB42B2RXF5 422 aa20.15■□□□□ 0.82
MSH6-207ENST00000456246 CTDNEP1O95476 244 aa20.15■□□□□ 0.82
MSH6-207ENST00000456246 TMOD1P28289 359 aa20.15■□□□□ 0.82
MSH6-207ENST00000456246 CD52P31358 61 aa20.15■□□□□ 0.82
MSH6-207ENST00000456246 ME3Q16798 604 aa20.15■□□□□ 0.82
MSH6-207ENST00000456246 INF2Q27J81 1249 aa20.15■□□□□ 0.82
MSH6-207ENST00000456246 TJAP1Q5JTD0 557 aa20.15■□□□□ 0.82
MSH6-207ENST00000456246 PPP4R3AQ6IN85 833 aa20.15■□□□□ 0.82
MSH6-207ENST00000456246 KIAA0319LQ8IZA0 1049 aa20.15■□□□□ 0.82
MSH6-207ENST00000456246 MICALL1Q8N3F8 863 aa20.15■□□□□ 0.82
MSH6-207ENST00000456246 ETNPPLQ8TBG4 499 aa20.15■□□□□ 0.82
MSH6-207ENST00000456246 UNC45AQ9H3U1 944 aa20.15■□□□□ 0.82
MSH6-207ENST00000456246 AGO3Q9H9G7 860 aaKnown RBP20.15■□□□□ 0.82
MSH6-207ENST00000456246 RNF216Q9NWF9 866 aaPredicted RBP20.15■□□□□ 0.82
MSH6-207ENST00000456246 WDR81Q562E7 1941 aa20.15■□□□□ 0.82
MSH6-207ENST00000456246 TTC3P53804 2025 aa20.14■□□□□ 0.81
MSH6-207ENST00000456246 ENPP3O14638 875 aa20.14■□□□□ 0.81
MSH6-207ENST00000456246 CHMP2AO43633 222 aa20.14■□□□□ 0.81
MSH6-207ENST00000456246 PRKCEQ02156 737 aa20.14■□□□□ 0.81
MSH6-207ENST00000456246 TMEM62Q0P6H9 643 aa20.14■□□□□ 0.81
MSH6-207ENST00000456246 LETM2Q2VYF4 491 aa20.14■□□□□ 0.81
MSH6-207ENST00000456246 MIER3Q7Z3K6 550 aa20.14■□□□□ 0.81
MSH6-207ENST00000456246 FBXO22Q8NEZ5 403 aa20.14■□□□□ 0.81
MSH6-207ENST00000456246 FAM20AQ96MK3 541 aa20.14■□□□□ 0.81
MSH6-207ENST00000456246 COL25A1Q9BXS0 654 aaPredicted RBP20.14■□□□□ 0.81
MSH6-207ENST00000456246 SUGCTQ9HAC7 445 aa20.14■□□□□ 0.81
MSH6-207ENST00000456246 MTUS1Q9ULD2 1270 aa20.14■□□□□ 0.81
MSH6-207ENST00000456246 PADI3Q9ULW8 664 aa20.14■□□□□ 0.81
MSH6-207ENST00000456246 RWDD3Q9Y3V2 267 aa20.14■□□□□ 0.81
MSH6-207ENST00000456246 LPXNO60711 386 aa20.13■□□□□ 0.81
MSH6-207ENST00000456246 B3GNT9Q6UX72 402 aa20.13■□□□□ 0.81
MSH6-207ENST00000456246 SPRED2Q7Z698 418 aa20.13■□□□□ 0.81
MSH6-207ENST00000456246 NECAB1Q8N987 351 aa20.13■□□□□ 0.81
MSH6-207ENST00000456246 GDPD5Q8WTR4 605 aa20.13■□□□□ 0.81
MSH6-207ENST00000456246 MAP7D2Q96T17 732 aa20.13■□□□□ 0.81
MSH6-207ENST00000456246 EVPLQ92817 2033 aa20.13■□□□□ 0.81
MSH6-207ENST00000456246 TTC28Q96AY4 2481 aa20.12■□□□□ 0.81
MSH6-207ENST00000456246 ADGRA3Q8IWK6 1321 aa20.12■□□□□ 0.81
MSH6-207ENST00000456246 TBX3O15119 743 aa20.12■□□□□ 0.81
MSH6-207ENST00000456246 GPR182O15218 404 aa20.12■□□□□ 0.81
MSH6-207ENST00000456246 ZNF862O60290 1169 aa20.12■□□□□ 0.81
MSH6-207ENST00000456246 RPS6KA5O75582 802 aa20.12■□□□□ 0.81
MSH6-207ENST00000456246 STAG3L1P0CL83 205 aa20.12■□□□□ 0.81
MSH6-207ENST00000456246 KRT2P35908 639 aa20.12■□□□□ 0.81
MSH6-207ENST00000456246 CRYBB1P53674 252 aaPredicted RBP20.12■□□□□ 0.81
MSH6-207ENST00000456246 MRPS5P82675 430 aaKnown RBP20.12■□□□□ 0.81
MSH6-207ENST00000456246 TRIM29Q14134 588 aa20.12■□□□□ 0.81
MSH6-207ENST00000456246 SKIV2LQ15477 1246 aaKnown RBP20.12■□□□□ 0.81
MSH6-207ENST00000456246 AAK1Q2M2I8 961 aa20.12■□□□□ 0.81
MSH6-207ENST00000456246 NPAS4Q8IUM7 802 aa20.12■□□□□ 0.81
MSH6-207ENST00000456246 FIBCD1Q8N539 461 aa20.12■□□□□ 0.81
MSH6-207ENST00000456246 METTL13Q8N6R0 699 aa20.12■□□□□ 0.81
MSH6-207ENST00000456246 NSUN7Q8NE18 718 aaKnown RBP20.12■□□□□ 0.81
MSH6-207ENST00000456246 C17orf80Q9BSJ5 609 aa20.12■□□□□ 0.81
MSH6-207ENST00000456246 GINS2Q9Y248 185 aa20.12■□□□□ 0.81
MSH6-207ENST00000456246 LOXHD1Q8IVV2 1947 aa20.12■□□□□ 0.81
MSH6-207ENST00000456246 RALGAPA2Q2PPJ7 1873 aa20.11■□□□□ 0.81
MSH6-207ENST00000456246 DKC1O60832 514 aaKnown RBP eCLIP20.11■□□□□ 0.81
MSH6-207ENST00000456246 LARGE1O95461 756 aa20.11■□□□□ 0.81
MSH6-207ENST00000456246 SEC24BO95487 1268 aa20.11■□□□□ 0.81
MSH6-207ENST00000456246 FDPSP14324 419 aaKnown RBP20.11■□□□□ 0.81
MSH6-207ENST00000456246 EPC2Q52LR7 807 aa20.11■□□□□ 0.81
MSH6-207ENST00000456246 XKR3Q5GH77 459 aa20.11■□□□□ 0.81
MSH6-207ENST00000456246 PIK3AP1Q6ZUJ8 805 aa20.11■□□□□ 0.81
MSH6-207ENST00000456246 TRMT1LQ7Z2T5 733 aaKnown RBP20.11■□□□□ 0.81
MSH6-207ENST00000456246 KCNMB3Q9NPA1 279 aa20.11■□□□□ 0.81
MSH6-207ENST00000456246 COG5Q9UP83 839 aa20.11■□□□□ 0.81
MSH6-207ENST00000456246 SLC37A4O43826 429 aa20.1■□□□□ 0.81
MSH6-207ENST00000456246 CCNT1O60563 726 aaKnown RBP20.1■□□□□ 0.81
MSH6-207ENST00000456246 TBC1D8BQ0IIM8 1120 aa20.1■□□□□ 0.81
MSH6-207ENST00000456246 NFX1Q12986 1120 aaKnown RBP20.1■□□□□ 0.81
MSH6-207ENST00000456246 PPP2R5CQ13362 524 aa20.1■□□□□ 0.81
MSH6-207ENST00000456246 UGCGQ16739 394 aa20.1■□□□□ 0.81
MSH6-207ENST00000456246 PTPROQ16827 1216 aa20.1■□□□□ 0.81
MSH6-207ENST00000456246 EFCAB12Q6NXP0 572 aa20.1■□□□□ 0.81
MSH6-207ENST00000456246 TMEM192Q8IY95 271 aa20.1■□□□□ 0.81
MSH6-207ENST00000456246 LINC01465Q8N7H1 131 aa20.1■□□□□ 0.81
MSH6-207ENST00000456246 IL27Q8NEV9 243 aa20.1■□□□□ 0.81
MSH6-207ENST00000456246 LINC01599Q8WXQ3 324 aa20.1■□□□□ 0.81
MSH6-207ENST00000456246 ASB2Q96Q27 587 aa20.1■□□□□ 0.81
MSH6-207ENST00000456246 RC3H2Q9HBD1 1191 aaKnown RBP20.1■□□□□ 0.81
MSH6-207ENST00000456246 ERVK-5Q9HDB9 667 aa20.1■□□□□ 0.81
MSH6-207ENST00000456246 PRDM6Q9NQX0 595 aa20.1■□□□□ 0.81
MSH6-207ENST00000456246 C1orf112Q9NSG2 853 aa20.1■□□□□ 0.81
MSH6-207ENST00000456246 LIMCH1Q9UPQ0 1083 aa20.1■□□□□ 0.81
MSH6-207ENST00000456246 AKT3Q9Y243 479 aa20.1■□□□□ 0.81
MSH6-207ENST00000456246 DGKIO75912 1065 aa20.09■□□□□ 0.81
MSH6-207ENST00000456246 RB1P06400 928 aa20.09■□□□□ 0.81
MSH6-207ENST00000456246 PSMC5P62195 406 aa20.09■□□□□ 0.81
MSH6-207ENST00000456246 CDC42EP1Q00587 391 aa20.09■□□□□ 0.81
MSH6-207ENST00000456246 TARBP2Q15633 366 aaKnown RBP20.09■□□□□ 0.81
MSH6-207ENST00000456246 KIZQ2M2Z5 673 aa20.09■□□□□ 0.81
MSH6-207ENST00000456246 SLFN12Q8IYM2 578 aa20.09■□□□□ 0.81
MSH6-207ENST00000456246 OXER1Q8TDS5 423 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms