RNA–Protein interactions for RNA: ENST00000456235.1

LINC01563-201, Transcript of long intergenic non-protein coding RNA 1563, humanhuman

TSL 2 BASIC

Gene LINC01563, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01563-201ENST00000456235 PITPNM1O00562 1244 aa15.77■□□□□ 0.12
LINC01563-201ENST00000456235 VTNP04004 478 aa15.77■□□□□ 0.12
LINC01563-201ENST00000456235 RSPH10BP0C881 870 aa15.77■□□□□ 0.12
LINC01563-201ENST00000456235 QARSP47897 775 aaKnown RBP15.77■□□□□ 0.12
LINC01563-201ENST00000456235 SLC26A2P50443 739 aa15.77■□□□□ 0.12
LINC01563-201ENST00000456235 PSMC5P62195 406 aa15.77■□□□□ 0.12
LINC01563-201ENST00000456235 GRIN1Q05586 938 aa15.77■□□□□ 0.12
LINC01563-201ENST00000456235 PPIGQ13427 754 aaKnown RBP eCLIP15.77■□□□□ 0.12
LINC01563-201ENST00000456235 DRP2Q13474 957 aa15.77■□□□□ 0.12
LINC01563-201ENST00000456235 SF3A1Q15459 793 aaKnown RBP15.77■□□□□ 0.12
LINC01563-201ENST00000456235 ZRSR1Q15695 479 aaKnown RBP15.77■□□□□ 0.12
LINC01563-201ENST00000456235 TMEM240Q5SV17 173 aa15.77■□□□□ 0.12
LINC01563-201ENST00000456235 FAM109BQ6ICB4 259 aaPredicted RBP15.77■□□□□ 0.12
LINC01563-201ENST00000456235 POTEGQ6S5H5 508 aa15.77■□□□□ 0.12
LINC01563-201ENST00000456235 TMCO2Q7Z6W1 182 aaPredicted RBP15.77■□□□□ 0.12
LINC01563-201ENST00000456235 TDHQ8IZJ6 230 aa15.77■□□□□ 0.12
LINC01563-201ENST00000456235 RDM1Q8NG50 284 aa15.77■□□□□ 0.12
LINC01563-201ENST00000456235 RNPC3Q96LT9 517 aaKnown RBP15.77■□□□□ 0.12
LINC01563-201ENST00000456235 CXXC1Q9P0U4 656 aaPredicted RBP15.77■□□□□ 0.12
LINC01563-201ENST00000456235 DAXXQ9UER7 740 aaPredicted RBP15.77■□□□□ 0.12
LINC01563-201ENST00000456235 COL1A2P08123 1366 aa15.76■□□□□ 0.11
LINC01563-201ENST00000456235 TRIOBPQ9H2D6 2365 aa15.76■□□□□ 0.11
LINC01563-201ENST00000456235 VWA3AA6NCI4 1184 aa15.76■□□□□ 0.11
LINC01563-201ENST00000456235 RRN3P2A6NIE6 340 aa15.76■□□□□ 0.11
LINC01563-201ENST00000456235 ZBBXA8MT70 800 aa15.76■□□□□ 0.11
LINC01563-201ENST00000456235 SLITRK3O94933 977 aa15.76■□□□□ 0.11
LINC01563-201ENST00000456235 CHRNA1P02708 482 aa15.76■□□□□ 0.11
LINC01563-201ENST00000456235 P4HBP07237 508 aaKnown RBP15.76■□□□□ 0.11
LINC01563-201ENST00000456235 GHRP10912 638 aa15.76■□□□□ 0.11
LINC01563-201ENST00000456235 ECM1Q16610 540 aa15.76■□□□□ 0.11
LINC01563-201ENST00000456235 TMEM266Q2M3C6 531 aa15.76■□□□□ 0.11
LINC01563-201ENST00000456235 ZNF484Q5JVG2 852 aa15.76■□□□□ 0.11
LINC01563-201ENST00000456235 HABP4Q5JVS0 413 aaKnown RBP15.76■□□□□ 0.11
LINC01563-201ENST00000456235 BRAPQ7Z569 592 aa15.76■□□□□ 0.11
LINC01563-201ENST00000456235 PIGOQ8TEQ8 1089 aa15.76■□□□□ 0.11
LINC01563-201ENST00000456235 FAM167AQ96KS9 214 aa15.76■□□□□ 0.11
LINC01563-201ENST00000456235 PLIN2Q99541 437 aa15.76■□□□□ 0.11
LINC01563-201ENST00000456235 SUGCTQ9HAC7 445 aa15.76■□□□□ 0.11
LINC01563-201ENST00000456235 CDY2AQ9Y6F7 541 aa15.76■□□□□ 0.11
LINC01563-201ENST00000456235 MICAL3Q7RTP6 2002 aa15.76■□□□□ 0.11
LINC01563-201ENST00000456235 LAMA3Q16787 3333 aa15.76■□□□□ 0.11
LINC01563-201ENST00000456235 GRXCR1A8MXD5 290 aa15.75■□□□□ 0.11
LINC01563-201ENST00000456235 SPATA31C1P0DKV0 1188 aa15.75■□□□□ 0.11
LINC01563-201ENST00000456235 IBSPP21815 317 aaPredicted RBP15.75■□□□□ 0.11
LINC01563-201ENST00000456235 YWHABP31946 246 aaKnown RBP15.75■□□□□ 0.11
LINC01563-201ENST00000456235 BMP8BP34820 402 aa15.75■□□□□ 0.11
LINC01563-201ENST00000456235 MRPS6P82932 125 aaKnown RBP15.75■□□□□ 0.11
LINC01563-201ENST00000456235 ATP2C1P98194 919 aaPredicted RBP15.75■□□□□ 0.11
LINC01563-201ENST00000456235 MGAT3Q09327 533 aa15.75■□□□□ 0.11
LINC01563-201ENST00000456235 XKR3Q5GH77 459 aa15.75■□□□□ 0.11
LINC01563-201ENST00000456235 LRCH3Q96II8 777 aa15.75■□□□□ 0.11
LINC01563-201ENST00000456235 CDHR5Q9HBB8 845 aa15.75■□□□□ 0.11
LINC01563-201ENST00000456235 NRBP2Q9NSY0 501 aa15.75■□□□□ 0.11
LINC01563-201ENST00000456235 LRWD1Q9UFC0 647 aa15.75■□□□□ 0.11
LINC01563-201ENST00000456235 PCDHA2Q9Y5H9 948 aa15.75■□□□□ 0.11
LINC01563-201ENST00000456235 MARCKSP29966 332 aaPredicted RBP15.74■□□□□ 0.11
LINC01563-201ENST00000456235 CCT6AP40227 531 aaKnown RBP15.74■□□□□ 0.11
LINC01563-201ENST00000456235 RBL2Q08999 1139 aa15.74■□□□□ 0.11
LINC01563-201ENST00000456235 TBC1D8BQ0IIM8 1120 aa15.74■□□□□ 0.11
LINC01563-201ENST00000456235 ORC2Q13416 577 aaPredicted RBP15.74■□□□□ 0.11
LINC01563-201ENST00000456235 KIZQ2M2Z5 673 aa15.74■□□□□ 0.11
LINC01563-201ENST00000456235 XKR9Q5GH70 373 aa15.74■□□□□ 0.11
LINC01563-201ENST00000456235 EFCAB12Q6NXP0 572 aa15.74■□□□□ 0.11
LINC01563-201ENST00000456235 TAF2Q6P1X5 1199 aa15.74■□□□□ 0.11
LINC01563-201ENST00000456235 CATSPER3Q86XQ3 398 aa15.74■□□□□ 0.11
LINC01563-201ENST00000456235 KIAA0319LQ8IZA0 1049 aa15.74■□□□□ 0.11
LINC01563-201ENST00000456235 SNX29Q8TEQ0 813 aa15.74■□□□□ 0.11
LINC01563-201ENST00000456235 CEP170P1Q96L14 293 aa15.74■□□□□ 0.11
LINC01563-201ENST00000456235 USP28Q96RU2 1077 aa15.74■□□□□ 0.11
LINC01563-201ENST00000456235 CEP89Q96ST8 783 aa15.74■□□□□ 0.11
LINC01563-201ENST00000456235 HSD17B14Q9BPX1 270 aa15.74■□□□□ 0.11
LINC01563-201ENST00000456235 CYP26B1Q9NR63 512 aa15.74■□□□□ 0.11
LINC01563-201ENST00000456235 AKT3Q9Y243 479 aa15.74■□□□□ 0.11
LINC01563-201ENST00000456235 FGBP02675 491 aa15.73■□□□□ 0.11
LINC01563-201ENST00000456235 ZSCAN22P10073 491 aaPredicted RBP15.73■□□□□ 0.11
LINC01563-201ENST00000456235 FXR2P51116 673 aaKnown RBP eCLIP15.73■□□□□ 0.11
LINC01563-201ENST00000456235 MKRN4PQ13434 485 aaPredicted RBP15.73■□□□□ 0.11
LINC01563-201ENST00000456235 TARBP2Q15633 366 aaKnown RBP15.73■□□□□ 0.11
LINC01563-201ENST00000456235 SPECC1Q5M775 1068 aa15.73■□□□□ 0.11
LINC01563-201ENST00000456235 PSRC1Q6PGN9 363 aaPredicted RBP15.73■□□□□ 0.11
LINC01563-201ENST00000456235 DTHD1Q6ZMT9 781 aa15.73■□□□□ 0.11
LINC01563-201ENST00000456235 MAEAQ7L5Y9 396 aa15.73■□□□□ 0.11
LINC01563-201ENST00000456235 KSR1Q8IVT5 923 aa15.73■□□□□ 0.11
LINC01563-201ENST00000456235 TMEM40Q8WWA1 233 aa15.73■□□□□ 0.11
LINC01563-201ENST00000456235 TMEM143Q96AN5 459 aa15.73■□□□□ 0.11
LINC01563-201ENST00000456235 OSMRQ99650 979 aa15.73■□□□□ 0.11
LINC01563-201ENST00000456235 NIFKQ9BYG3 293 aaKnown RBP15.73■□□□□ 0.11
LINC01563-201ENST00000456235 ZSWIM4Q9H7M6 989 aa15.73■□□□□ 0.11
LINC01563-201ENST00000456235 POLD4Q9HCU8 107 aa15.73■□□□□ 0.11
LINC01563-201ENST00000456235 TFIP11Q9UBB9 837 aaKnown RBP15.73■□□□□ 0.11
LINC01563-201ENST00000456235 CEP131Q9UPN4 1083 aa15.73■□□□□ 0.11
LINC01563-201ENST00000456235 TRPV2Q9Y5S1 764 aa15.73■□□□□ 0.11
LINC01563-201ENST00000456235 LAMA2P24043 3122 aaKnown RBP15.72■□□□□ 0.11
LINC01563-201ENST00000456235 SMIM35A0A1B0GVV1 85 aa15.72■□□□□ 0.11
LINC01563-201ENST00000456235 CSDE1O75534 798 aaKnown RBP15.72■□□□□ 0.11
LINC01563-201ENST00000456235 F13A1P00488 732 aa15.72■□□□□ 0.11
LINC01563-201ENST00000456235 FGFR4P22455 802 aa15.72■□□□□ 0.11
LINC01563-201ENST00000456235 CD52P31358 61 aa15.72■□□□□ 0.11
LINC01563-201ENST00000456235 POLGP54098 1239 aaPredicted RBP15.72■□□□□ 0.11
LINC01563-201ENST00000456235 BECN1Q14457 450 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms