RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 EML1O00423 815 aa18.27■□□□□ 0.52
SMPD4-214ENST00000455548 PSMC5P62195 406 aa18.27■□□□□ 0.52
SMPD4-214ENST00000455548 TCTN1Q2MV58 587 aa18.27■□□□□ 0.52
SMPD4-214ENST00000455548 FBXO47Q5MNV8 452 aa18.27■□□□□ 0.52
SMPD4-214ENST00000455548 HERC6Q8IVU3 1022 aa18.27■□□□□ 0.52
SMPD4-214ENST00000455548 USP38Q8NB14 1042 aa18.27■□□□□ 0.52
SMPD4-214ENST00000455548 IFIH1Q9BYX4 1025 aaKnown RBP18.27■□□□□ 0.52
SMPD4-214ENST00000455548 TTYH1Q9H313 450 aaPredicted RBP18.27■□□□□ 0.52
SMPD4-214ENST00000455548 SMC3Q9UQE7 1217 aa18.27■□□□□ 0.52
SMPD4-214ENST00000455548 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.27■□□□□ 0.52
SMPD4-214ENST00000455548 KDM3AQ9Y4C1 1321 aa18.26■□□□□ 0.51
SMPD4-214ENST00000455548 P4HBP07237 508 aaKnown RBP18.26■□□□□ 0.51
SMPD4-214ENST00000455548 GHRP10912 638 aa18.26■□□□□ 0.51
SMPD4-214ENST00000455548 ATP2B1P20020 1258 aa18.26■□□□□ 0.51
SMPD4-214ENST00000455548 U2AF2P26368 475 aaKnown RBP eCLIP18.26■□□□□ 0.51
SMPD4-214ENST00000455548 GJB2P29033 226 aa18.26■□□□□ 0.51
SMPD4-214ENST00000455548 QARSP47897 775 aaKnown RBP18.26■□□□□ 0.51
SMPD4-214ENST00000455548 TRAPPC10P48553 1259 aa18.26■□□□□ 0.51
SMPD4-214ENST00000455548 LPIN1Q14693 890 aa18.26■□□□□ 0.51
SMPD4-214ENST00000455548 EPHA7Q15375 998 aa18.26■□□□□ 0.51
SMPD4-214ENST00000455548 NCAPH2Q6IBW4 605 aa18.26■□□□□ 0.51
SMPD4-214ENST00000455548 TSHZ1Q6ZSZ6 1077 aa18.26■□□□□ 0.51
SMPD4-214ENST00000455548 KIAA0319LQ8IZA0 1049 aa18.26■□□□□ 0.51
SMPD4-214ENST00000455548 FAM161BQ96MY7 647 aa18.26■□□□□ 0.51
SMPD4-214ENST00000455548 NIFKQ9BYG3 293 aaKnown RBP18.26■□□□□ 0.51
SMPD4-214ENST00000455548 CELF4Q9BZC1 486 aaKnown RBP18.26■□□□□ 0.51
SMPD4-214ENST00000455548 SLC28A3Q9HAS3 691 aa18.26■□□□□ 0.51
SMPD4-214ENST00000455548 NOL7Q9UMY1 257 aaKnown RBP18.26■□□□□ 0.51
SMPD4-214ENST00000455548 PCDHA12Q9UN75 941 aa18.26■□□□□ 0.51
SMPD4-214ENST00000455548 WNT7AO00755 349 aa18.25■□□□□ 0.51
SMPD4-214ENST00000455548 TMOD1P28289 359 aa18.25■□□□□ 0.51
SMPD4-214ENST00000455548 MCM7P33993 719 aa18.25■□□□□ 0.51
SMPD4-214ENST00000455548 RABGGTBP53611 331 aa18.25■□□□□ 0.51
SMPD4-214ENST00000455548 DEFB103AP81534 67 aa18.25■□□□□ 0.51
SMPD4-214ENST00000455548 SPIRE1Q08AE8 756 aa18.25■□□□□ 0.51
SMPD4-214ENST00000455548 TBC1D8BQ0IIM8 1120 aa18.25■□□□□ 0.51
SMPD4-214ENST00000455548 TARBP2Q15633 366 aaKnown RBP18.25■□□□□ 0.51
SMPD4-214ENST00000455548 ZNF710Q8N1W2 664 aa18.25■□□□□ 0.51
SMPD4-214ENST00000455548 METTL13Q8N6R0 699 aa18.25■□□□□ 0.51
SMPD4-214ENST00000455548 BANK1Q8NDB2 785 aa18.25■□□□□ 0.51
SMPD4-214ENST00000455548 MAP7D2Q96T17 732 aa18.25■□□□□ 0.51
SMPD4-214ENST00000455548 ZBED2Q9BTP6 218 aa18.25■□□□□ 0.51
SMPD4-214ENST00000455548 OSBPL7Q9BZF2 842 aa18.25■□□□□ 0.51
SMPD4-214ENST00000455548 NKX2-4Q9H2Z4 354 aa18.25■□□□□ 0.51
SMPD4-214ENST00000455548 ZNF576Q9H609 170 aa18.25■□□□□ 0.51
SMPD4-214ENST00000455548 SEPT9Q9UHD8 586 aaPredicted RBP18.25■□□□□ 0.51
SMPD4-214ENST00000455548 YBX2Q9Y2T7 364 aaKnown RBP18.25■□□□□ 0.51
SMPD4-214ENST00000455548 DDX11L8A8MPP1 907 aa18.24■□□□□ 0.51
SMPD4-214ENST00000455548 AMHP03971 560 aa18.24■□□□□ 0.51
SMPD4-214ENST00000455548 TMEM62Q0P6H9 643 aa18.24■□□□□ 0.51
SMPD4-214ENST00000455548 MKRN4PQ13434 485 aaPredicted RBP18.24■□□□□ 0.51
SMPD4-214ENST00000455548 EFCAB12Q6NXP0 572 aa18.24■□□□□ 0.51
SMPD4-214ENST00000455548 FAM43BQ6ZT52 329 aaPredicted RBP18.24■□□□□ 0.51
SMPD4-214ENST00000455548 MTMR9Q96QG7 549 aa18.24■□□□□ 0.51
SMPD4-214ENST00000455548 TTC12Q9H892 705 aaPredicted RBP18.24■□□□□ 0.51
SMPD4-214ENST00000455548 H3BQV1 296 aa18.23■□□□□ 0.51
SMPD4-214ENST00000455548 TLL1O43897 1013 aa18.23■□□□□ 0.51
SMPD4-214ENST00000455548 STBD1O95210 358 aa18.23■□□□□ 0.51
SMPD4-214ENST00000455548 TXKP42681 527 aa18.23■□□□□ 0.51
SMPD4-214ENST00000455548 CLCN3P51790 818 aa18.23■□□□□ 0.51
SMPD4-214ENST00000455548 CUL4AQ13619 759 aa18.23■□□□□ 0.51
SMPD4-214ENST00000455548 MTERF2Q49AM1 385 aa18.23■□□□□ 0.51
SMPD4-214ENST00000455548 TTC38Q5R3I4 469 aa18.23■□□□□ 0.51
SMPD4-214ENST00000455548 NEK9Q8TD19 979 aa18.23■□□□□ 0.51
SMPD4-214ENST00000455548 GUCD1Q96NT3 240 aa18.23■□□□□ 0.51
SMPD4-214ENST00000455548 JPH2Q9BR39 696 aaPredicted RBP18.23■□□□□ 0.51
SMPD4-214ENST00000455548 LXNQ9BS40 222 aa18.23■□□□□ 0.51
SMPD4-214ENST00000455548 STXBP5LQ9Y2K9 1186 aa18.23■□□□□ 0.51
SMPD4-214ENST00000455548 PPME1Q9Y570 386 aa18.23■□□□□ 0.51
SMPD4-214ENST00000455548 GJB5O95377 273 aa18.22■□□□□ 0.51
SMPD4-214ENST00000455548 MYOGP15173 224 aa18.22■□□□□ 0.51
SMPD4-214ENST00000455548 CD52P31358 61 aa18.22■□□□□ 0.51
SMPD4-214ENST00000455548 CRYBB1P53674 252 aaPredicted RBP18.22■□□□□ 0.51
SMPD4-214ENST00000455548 ZNF174Q15697 407 aa18.22■□□□□ 0.51
SMPD4-214ENST00000455548 ODR4Q5SWX8 454 aa18.22■□□□□ 0.51
SMPD4-214ENST00000455548 PPP2R2DQ66LE6 453 aa18.22■□□□□ 0.51
SMPD4-214ENST00000455548 MCTP1Q6DN14 999 aa18.22■□□□□ 0.51
SMPD4-214ENST00000455548 ANO5Q75V66 913 aa18.22■□□□□ 0.51
SMPD4-214ENST00000455548 C4orf19Q8IY42 314 aa18.22■□□□□ 0.51
SMPD4-214ENST00000455548 MYOCDQ8IZQ8 938 aa18.22■□□□□ 0.51
SMPD4-214ENST00000455548 LINC01465Q8N7H1 131 aa18.22■□□□□ 0.51
SMPD4-214ENST00000455548 DYDC2Q96IM9 177 aa18.22■□□□□ 0.51
SMPD4-214ENST00000455548 RAD9AQ99638 391 aa18.22■□□□□ 0.51
SMPD4-214ENST00000455548 TMEM60Q9H2L4 133 aa18.22■□□□□ 0.51
SMPD4-214ENST00000455548 ZSWIM4Q9H7M6 989 aa18.22■□□□□ 0.51
SMPD4-214ENST00000455548 AKT3Q9Y243 479 aa18.22■□□□□ 0.51
SMPD4-214ENST00000455548 CHD7Q9P2D1 2997 aa18.22■□□□□ 0.51
SMPD4-214ENST00000455548 VTNP04004 478 aa18.21■□□□□ 0.51
SMPD4-214ENST00000455548 CA3P07451 260 aa18.21■□□□□ 0.51
SMPD4-214ENST00000455548 OR52Z1P0C646 297 aa18.21■□□□□ 0.51
SMPD4-214ENST00000455548 DNM2P50570 870 aa18.21■□□□□ 0.51
SMPD4-214ENST00000455548 PAK2Q13177 524 aa18.21■□□□□ 0.51
SMPD4-214ENST00000455548 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.21■□□□□ 0.51
SMPD4-214ENST00000455548 OTUD6AQ7L8S5 288 aa18.21■□□□□ 0.51
SMPD4-214ENST00000455548 EXOC8Q8IYI6 725 aa18.21■□□□□ 0.51
SMPD4-214ENST00000455548 LRRC71Q8N4P6 559 aa18.21■□□□□ 0.51
SMPD4-214ENST00000455548 CEP89Q96ST8 783 aa18.21■□□□□ 0.51
SMPD4-214ENST00000455548 CDX2Q99626 313 aaPredicted RBP18.21■□□□□ 0.51
SMPD4-214ENST00000455548 EIF2AK1Q9BQI3 630 aaKnown RBP18.21■□□□□ 0.51
SMPD4-214ENST00000455548 FTHL17Q9BXU8 183 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms