RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 LRRC15Q8TF66 581 aa12.17□□□□□ -0.46
DDR1-240ENST00000454612 FAM118BQ9BPY3 351 aa12.17□□□□□ -0.46
DDR1-240ENST00000454612 MTA3Q9BTC8 594 aa12.17□□□□□ -0.46
DDR1-240ENST00000454612 MKRN1Q9UHC7 482 aaKnown RBP12.17□□□□□ -0.46
DDR1-240ENST00000454612 ATP6V0A2Q9Y487 856 aa12.17□□□□□ -0.46
DDR1-240ENST00000454612 KLRC4O43908 158 aa12.17□□□□□ -0.46
DDR1-240ENST00000454612 DDR1Q08345 913 aa12.17□□□□□ -0.46
DDR1-240ENST00000454612 NNTQ13423 1086 aa12.17□□□□□ -0.46
DDR1-240ENST00000454612 NBPF9Q3BBW0 867 aa12.17□□□□□ -0.46
DDR1-240ENST00000454612 HP1BP3Q5SSJ5 553 aaPredicted RBP12.17□□□□□ -0.46
DDR1-240ENST00000454612 CERS5Q8N5B7 392 aa12.17□□□□□ -0.46
DDR1-240ENST00000454612 FAM71BQ8TC56 605 aa12.17□□□□□ -0.46
DDR1-240ENST00000454612 CELF4Q9BZC1 486 aaKnown RBP12.17□□□□□ -0.46
DDR1-240ENST00000454612 ATF5Q9Y2D1 282 aaPredicted RBP12.17□□□□□ -0.46
DDR1-240ENST00000454612 ATMINO43313 823 aaPredicted RBP12.16□□□□□ -0.46
DDR1-240ENST00000454612 CASP5P51878 434 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 COG2Q14746 738 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 GRIPAP1Q4V328 841 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 MMS22LQ6ZRQ5 1243 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 MICALCLQ6ZW33 695 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 RSRC2Q7L4I2 434 aaKnown RBP12.16□□□□□ -0.46
DDR1-240ENST00000454612 CATSPER3Q86XQ3 398 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 CCDC170Q8IYT3 715 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 GUF1Q8N442 669 aaKnown RBP12.16□□□□□ -0.46
DDR1-240ENST00000454612 TNFRSF25Q93038 417 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 SAAL1Q96ER3 474 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 THOC1Q96FV9 657 aaKnown RBP12.16□□□□□ -0.46
DDR1-240ENST00000454612 COA1Q9GZY4 146 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 DHX36Q9H2U1 1008 aaKnown RBP12.16□□□□□ -0.46
DDR1-240ENST00000454612 CUEDC2Q9H467 287 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 NR3C1P04150 777 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 VIMP08670 466 aaKnown RBP12.16□□□□□ -0.46
DDR1-240ENST00000454612 RPSAP08865 295 aaKnown RBP12.16□□□□□ -0.46
DDR1-240ENST00000454612 GUCY1A3Q02108 690 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 KCNB1Q14721 858 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 AP1ARQ63HQ0 302 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 GSTA5Q7RTV2 222 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 FGGP02679 453 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 STAT2P52630 851 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 PEX3P56589 373 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 STXBP4Q6ZWJ1 553 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 ANKRD42Q8N9B4 389 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 PRMT6Q96LA8 375 aaPredicted RBP12.16□□□□□ -0.46
DDR1-240ENST00000454612 C7orf25Q9BPX7 421 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 RAVER2Q9HCJ3 691 aaKnown RBP12.16□□□□□ -0.46
DDR1-240ENST00000454612 SNX12Q9UMY4 172 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 L1RE1Q9UN81 338 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 SNX24Q9Y343 169 aa12.16□□□□□ -0.46
DDR1-240ENST00000454612 TISP43B9A030 160 aa12.15□□□□□ -0.46
DDR1-240ENST00000454612 KCNJ6P48051 423 aa12.15□□□□□ -0.46
DDR1-240ENST00000454612 MAP2K1Q02750 393 aaPredicted RBP12.15□□□□□ -0.46
DDR1-240ENST00000454612 PTK2Q05397 1052 aa12.15□□□□□ -0.46
DDR1-240ENST00000454612 PAK2Q13177 524 aa12.15□□□□□ -0.46
DDR1-240ENST00000454612 DGKZQ13574 1117 aa12.15□□□□□ -0.46
DDR1-240ENST00000454612 R3HDM1Q15032 1099 aaKnown RBP12.15□□□□□ -0.46
DDR1-240ENST00000454612 IFI16Q16666 785 aaKnown RBP12.15□□□□□ -0.46
DDR1-240ENST00000454612 OTUD6AQ7L8S5 288 aa12.15□□□□□ -0.46
DDR1-240ENST00000454612 KIFC3Q9BVG8 833 aa12.15□□□□□ -0.46
DDR1-240ENST00000454612 ACP6Q9NPH0 428 aa12.15□□□□□ -0.46
DDR1-240ENST00000454612 STIM2Q9P246 746 aa12.15□□□□□ -0.46
DDR1-240ENST00000454612 AMFRQ9UKV5 643 aa12.15□□□□□ -0.46
DDR1-240ENST00000454612 PDS5AQ29RF7 1337 aaKnown RBP12.15□□□□□ -0.46
DDR1-240ENST00000454612 GOLGA6L10A0A0M3HER8 536 aa12.15□□□□□ -0.46
DDR1-240ENST00000454612 CALCAP01258 141 aa12.15□□□□□ -0.46
DDR1-240ENST00000454612 TNNI1P19237 187 aa12.15□□□□□ -0.46
DDR1-240ENST00000454612 SLC10A5Q5PT55 438 aa12.15□□□□□ -0.46
DDR1-240ENST00000454612 SPIRE2Q8WWL2 714 aa12.15□□□□□ -0.46
DDR1-240ENST00000454612 MMTAG2Q9BU76 263 aaKnown RBP12.15□□□□□ -0.46
DDR1-240ENST00000454612 DNAJC12Q9UKB3 198 aa12.15□□□□□ -0.46
DDR1-240ENST00000454612 NID2Q14112 1375 aa12.15□□□□□ -0.46
DDR1-240ENST00000454612 KDM3AQ9Y4C1 1321 aa12.15□□□□□ -0.46
DDR1-240ENST00000454612 CTNNA2P26232 953 aa12.15□□□□□ -0.47
DDR1-240ENST00000454612 POLD1P28340 1107 aa12.15□□□□□ -0.47
DDR1-240ENST00000454612 LRRC63Q05C16 580 aa12.15□□□□□ -0.47
DDR1-240ENST00000454612 IFT88Q13099 833 aa12.15□□□□□ -0.47
DDR1-240ENST00000454612 ZNF394Q53GI3 561 aa12.15□□□□□ -0.47
DDR1-240ENST00000454612 KAZNQ674X7 775 aa12.15□□□□□ -0.47
DDR1-240ENST00000454612 PDXDC1Q6P996 788 aa12.15□□□□□ -0.47
DDR1-240ENST00000454612 C4orf32Q8N8J7 132 aa12.15□□□□□ -0.47
DDR1-240ENST00000454612 N4BP2L2Q92802 583 aaPredicted RBP12.15□□□□□ -0.47
DDR1-240ENST00000454612 ARL8AQ96BM9 186 aa12.15□□□□□ -0.47
DDR1-240ENST00000454612 EIF2AK1Q9BQI3 630 aaKnown RBP12.15□□□□□ -0.47
DDR1-240ENST00000454612 ZNF341Q9BYN7 854 aa12.15□□□□□ -0.47
DDR1-240ENST00000454612 RIC8AQ9NPQ8 531 aa12.15□□□□□ -0.47
DDR1-240ENST00000454612 ASIC3Q9UHC3 531 aa12.15□□□□□ -0.47
DDR1-240ENST00000454612 MYH2Q9UKX2 1941 aa12.15□□□□□ -0.47
DDR1-240ENST00000454612 POLRMTO00411 1230 aaKnown RBP12.14□□□□□ -0.47
DDR1-240ENST00000454612 SERPING1P05155 500 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 TM4SF1P30408 202 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 PPP1R2P41236 205 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 SEC24CP53992 1094 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 RHBDL3P58872 404 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 APTXQ7Z2E3 356 aaKnown RBP12.14□□□□□ -0.47
DDR1-240ENST00000454612 JDP2Q8WYK2 163 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 RUSC1Q9BVN2 902 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 TMEM39BQ9GZU3 492 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 COL5A3P25940 1745 aaPredicted RBP12.14□□□□□ -0.47
DDR1-240ENST00000454612 SLC16A4O15374 487 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 SOX10P56693 466 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 OSTNP61366 133 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms