RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 MAN1B1Q9UKM7 699 aa5.59□□□□□ -1.52
RIF1-207ENST00000454583 ESPNB1AK53 854 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 PMM2O15305 246 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 NPTXRO95502 500 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 YY1P25490 414 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 WNT7BP56706 349 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 NLRP5P59047 1200 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 PURAQ00577 322 aaKnown RBP5.58□□□□□ -1.52
RIF1-207ENST00000454583 PRKG1Q13976 671 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 PLCB4Q15147 1175 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 SCARA3Q6AZY7 606 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 SMYD5Q6GMV2 418 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 CENPPQ6IPU0 288 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 METTL7BQ6UX53 244 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 CRELD2Q6UXH1 353 aaPredicted RBP5.58□□□□□ -1.52
RIF1-207ENST00000454583 ZSCAN30Q86W11 494 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 NEK9Q8TD19 979 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 PRO3102Q9H379 93 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 KIAA1468Q9P260 1216 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 ATMINO43313 823 aaPredicted RBP5.58□□□□□ -1.52
RIF1-207ENST00000454583 EYA4O95677 639 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 ALDH1A1P00352 501 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 CCND2P30279 289 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 ADSSP30520 456 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 ZNF75DP51815 510 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 GTF2BQ00403 316 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 PRKCZQ05513 592 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 ADSSL1Q8N142 457 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 PLEKHO2Q8TD55 490 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 ZNF296Q8WUU4 475 aaPredicted RBP5.58□□□□□ -1.52
RIF1-207ENST00000454583 SOCS4Q8WXH5 440 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 MRPS27Q92552 414 aaKnown RBP5.58□□□□□ -1.52
RIF1-207ENST00000454583 MS4A3Q96HJ5 214 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 SPATA32Q96LK8 384 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 RMDN3Q96TC7 470 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 MMP19Q99542 508 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 TRAIPQ9BWF2 469 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 GPR88Q9GZN0 384 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 TTC12Q9H892 705 aaPredicted RBP5.58□□□□□ -1.52
RIF1-207ENST00000454583 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.58□□□□□ -1.52
RIF1-207ENST00000454583 STK17AQ9UEE5 414 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 SRRDQ9UH36 339 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 CPA4Q9UI42 421 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 PHF24Q9UPV7 400 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 PTPN22Q9Y2R2 807 aa5.58□□□□□ -1.52
RIF1-207ENST00000454583 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.58□□□□□ -1.52
RIF1-207ENST00000454583 A0A1B0GVL5 298 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 TTLL13PA6NNM8 815 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 GPR25O00155 361 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 IPO5O00410 1097 aaKnown RBP5.57□□□□□ -1.52
RIF1-207ENST00000454583 MAFO75444 373 aaPredicted RBP5.57□□□□□ -1.52
RIF1-207ENST00000454583 LY6KQ17RY6 165 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 GADL1Q6ZQY3 521 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 HOMER1Q86YM7 354 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 PIBF1Q8WXW3 757 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 PHF12Q96QT6 1004 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 BMP2KQ9NSY1 1161 aaPredicted RBP5.57□□□□□ -1.52
RIF1-207ENST00000454583 TBC1D22BQ9NU19 505 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 KCNH3Q9ULD8 1083 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 TRAF3IP3Q9Y228 551 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 RANBP2P49792 3224 aaKnown RBP5.57□□□□□ -1.52
RIF1-207ENST00000454583 CTIFO43310 598 aaKnown RBP5.57□□□□□ -1.52
RIF1-207ENST00000454583 CCND3P30281 292 aaPredicted RBP5.57□□□□□ -1.52
RIF1-207ENST00000454583 TRAF1Q13077 416 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 PABPC4Q13310 644 aaKnown RBP eCLIP5.57□□□□□ -1.52
RIF1-207ENST00000454583 SYNE3Q6ZMZ3 975 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 CCAR1Q8IX12 1150 aaKnown RBP5.57□□□□□ -1.52
RIF1-207ENST00000454583 GRAMD1CQ8IYS0 662 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 SCFD1Q8WVM8 642 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 COPS5Q92905 334 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 SEC63Q9UGP8 760 aaKnown RBP5.57□□□□□ -1.52
RIF1-207ENST00000454583 SERTAD1Q9UHV2 236 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 POTEB3A0JP26 581 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 CASP1P29466 404 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 NF2P35240 595 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 ACTR2P61160 394 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 MTMR1Q13613 665 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 CALCRLQ16602 461 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 CSPP1Q1MSJ5 1256 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 DPCR1Q3MIW9 517 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 IQSEC1Q6DN90 963 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 POTEBQ6S5H4 581 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 CD300LGQ6UXG3 332 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 SLC9A9Q8IVB4 645 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 ZNF396Q96N95 335 aaPredicted RBP5.57□□□□□ -1.52
RIF1-207ENST00000454583 VAT1LQ9HCJ6 419 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 ANKEF1Q9NU02 776 aa5.57□□□□□ -1.52
RIF1-207ENST00000454583 PVALEFA0A1B0GWK0 134 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 GOLGA6L22H0YM25 854 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 BACH1O14867 736 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 MARCKSP29966 332 aaPredicted RBP5.56□□□□□ -1.52
RIF1-207ENST00000454583 MCM7P33993 719 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 NLRP12P59046 1061 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 DRP2Q13474 957 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 ACVR2BQ13705 512 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 MBTPS1Q14703 1052 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 KARSQ15046 597 aaKnown RBP5.56□□□□□ -1.52
RIF1-207ENST00000454583 FBXO16Q8IX29 292 aaPredicted RBP5.56□□□□□ -1.52
RIF1-207ENST00000454583 TRIML1Q8N9V2 468 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 NAA15Q9BXJ9 866 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms