RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 BIN1O00499 593 aa12.26□□□□□ -0.45
SCN9A-205ENST00000454569 BACH1O14867 736 aa12.26□□□□□ -0.45
SCN9A-205ENST00000454569 LYPLA2O95372 231 aa12.26□□□□□ -0.45
SCN9A-205ENST00000454569 EYA4O95677 639 aa12.26□□□□□ -0.45
SCN9A-205ENST00000454569 GNRH1P01148 92 aa12.26□□□□□ -0.45
SCN9A-205ENST00000454569 ZNF286BP0CG31 522 aa12.26□□□□□ -0.45
SCN9A-205ENST00000454569 CYP11B2P19099 503 aa12.26□□□□□ -0.45
SCN9A-205ENST00000454569 SARSP49591 514 aaKnown RBP12.26□□□□□ -0.45
SCN9A-205ENST00000454569 LAMC2Q13753 1193 aa12.26□□□□□ -0.45
SCN9A-205ENST00000454569 TLK2Q86UE8 772 aa12.26□□□□□ -0.45
SCN9A-205ENST00000454569 C4orf19Q8IY42 314 aa12.26□□□□□ -0.45
SCN9A-205ENST00000454569 SYT2Q8N9I0 419 aaPredicted RBP12.26□□□□□ -0.45
SCN9A-205ENST00000454569 DNAJC19Q96DA6 116 aa12.26□□□□□ -0.45
SCN9A-205ENST00000454569 USP25Q9UHP3 1055 aa12.26□□□□□ -0.45
SCN9A-205ENST00000454569 TUBE1Q9UJT0 475 aa12.26□□□□□ -0.45
SCN9A-205ENST00000454569 DNM3Q9UQ16 869 aa12.26□□□□□ -0.45
SCN9A-205ENST00000454569 PTPN22Q9Y2R2 807 aa12.26□□□□□ -0.45
SCN9A-205ENST00000454569 RSPH10B2B2RC85 870 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 NOP56O00567 594 aaKnown RBP12.25□□□□□ -0.45
SCN9A-205ENST00000454569 SLC26A4O43511 780 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 PGK1P00558 417 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 HMGCRP04035 888 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 INHAP05111 366 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 LGALS2P05162 132 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 MMP3P08254 477 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 RSPH10BP0C881 870 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 MARK3P27448 753 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 YWHABP31946 246 aaKnown RBP12.25□□□□□ -0.45
SCN9A-205ENST00000454569 GRK4P32298 578 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 RARRES1P49788 294 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 STAT5BP51692 787 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 LBX1P52954 281 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 PRKCEQ02156 737 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 RINT1Q6NUQ1 792 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 SV2BQ7L1I2 683 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 GPBP1Q86WP2 473 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 ELOA2Q8IYF1 753 aaPredicted RBP12.25□□□□□ -0.45
SCN9A-205ENST00000454569 PPTC7Q8NI37 304 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 SPATA20Q8TB22 786 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 NEK9Q8TD19 979 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 PXYLP1Q8TE99 480 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 HPS3Q969F9 1004 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 ZBTB10Q96DT7 871 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 NACC1Q96RE7 527 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 CEP89Q96ST8 783 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 C16orf70Q9BSU1 422 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 TRIM9Q9C026 710 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 RNPEPQ9H4A4 650 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 TCEAL9Q9UHQ7 104 aa12.25□□□□□ -0.45
SCN9A-205ENST00000454569 C2orf72A6NCS6 295 aa12.24□□□□□ -0.45
SCN9A-205ENST00000454569 A6NJR5 290 aa12.24□□□□□ -0.45
SCN9A-205ENST00000454569 SEPT4O43236 478 aa12.24□□□□□ -0.45
SCN9A-205ENST00000454569 MYCP01106 439 aaPredicted RBP12.24□□□□□ -0.45
SCN9A-205ENST00000454569 HSPA1AP0DMV8 641 aaKnown RBP12.24□□□□□ -0.45
SCN9A-205ENST00000454569 HSPA1BP0DMV9 641 aaKnown RBP12.24□□□□□ -0.45
SCN9A-205ENST00000454569 AKR1A1P14550 325 aa12.24□□□□□ -0.45
SCN9A-205ENST00000454569 MUTP22033 750 aa12.24□□□□□ -0.45
SCN9A-205ENST00000454569 SOX10P56693 466 aa12.24□□□□□ -0.45
SCN9A-205ENST00000454569 PLCB4Q15147 1175 aa12.24□□□□□ -0.45
SCN9A-205ENST00000454569 C1orf186Q6ZWK4 172 aa12.24□□□□□ -0.45
SCN9A-205ENST00000454569 AFAP1L1Q8TED9 768 aa12.24□□□□□ -0.45
SCN9A-205ENST00000454569 DDX12PQ92771 950 aa12.24□□□□□ -0.45
SCN9A-205ENST00000454569 C7orf25Q9BPX7 421 aa12.24□□□□□ -0.45
SCN9A-205ENST00000454569 CUEDC2Q9H467 287 aa12.24□□□□□ -0.45
SCN9A-205ENST00000454569 MAN1B1Q9UKM7 699 aa12.24□□□□□ -0.45
SCN9A-205ENST00000454569 SCN10AQ9Y5Y9 1956 aa12.24□□□□□ -0.45
SCN9A-205ENST00000454569 SYNRGQ9UMZ2 1314 aa12.24□□□□□ -0.45
SCN9A-205ENST00000454569 SFI1A8K8P3 1242 aa12.23□□□□□ -0.45
SCN9A-205ENST00000454569 ZBTB42B2RXF5 422 aa12.23□□□□□ -0.45
SCN9A-205ENST00000454569 NKRFO15226 690 aaKnown RBP eCLIP12.23□□□□□ -0.45
SCN9A-205ENST00000454569 DUSP11O75319 330 aaKnown RBP12.23□□□□□ -0.45
SCN9A-205ENST00000454569 HOXD8P13378 290 aaPredicted RBP12.23□□□□□ -0.45
SCN9A-205ENST00000454569 GIT2Q14161 759 aa12.23□□□□□ -0.45
SCN9A-205ENST00000454569 XKR9Q5GH70 373 aa12.23□□□□□ -0.45
SCN9A-205ENST00000454569 NT5DC1Q5TFE4 455 aa12.23□□□□□ -0.45
SCN9A-205ENST00000454569 KANK3Q6NY19 840 aa12.23□□□□□ -0.45
SCN9A-205ENST00000454569 MAEAQ7L5Y9 396 aa12.23□□□□□ -0.45
SCN9A-205ENST00000454569 PLPP6Q8IY26 295 aa12.23□□□□□ -0.45
SCN9A-205ENST00000454569 TRMT44Q8IYL2 757 aaKnown RBP12.23□□□□□ -0.45
SCN9A-205ENST00000454569 TRAPPC12Q8WVT3 735 aa12.23□□□□□ -0.45
SCN9A-205ENST00000454569 KAT2BQ92831 832 aa12.23□□□□□ -0.45
SCN9A-205ENST00000454569 GLG1Q92896 1179 aa12.23□□□□□ -0.45
SCN9A-205ENST00000454569 ATP6V0A1Q93050 837 aa12.23□□□□□ -0.45
SCN9A-205ENST00000454569 SYAP1Q96A49 352 aaPredicted RBP12.23□□□□□ -0.45
SCN9A-205ENST00000454569 PYM1Q9BRP8 204 aaKnown RBP12.23□□□□□ -0.45
SCN9A-205ENST00000454569 FGFBP2Q9BYJ0 223 aa12.23□□□□□ -0.45
SCN9A-205ENST00000454569 NRBP1Q9UHY1 535 aa12.23□□□□□ -0.45
SCN9A-205ENST00000454569 EMSYQ7Z589 1322 aa12.23□□□□□ -0.45
SCN9A-205ENST00000454569 ADAMTS4O75173 837 aa12.22□□□□□ -0.45
SCN9A-205ENST00000454569 PPFIA4O75335 1185 aa12.22□□□□□ -0.45
SCN9A-205ENST00000454569 OATP04181 439 aa12.22□□□□□ -0.45
SCN9A-205ENST00000454569 RPN1P04843 607 aaKnown RBP12.22□□□□□ -0.45
SCN9A-205ENST00000454569 GJA9P57773 515 aa12.22□□□□□ -0.45
SCN9A-205ENST00000454569 ZNF445P59923 1031 aa12.22□□□□□ -0.45
SCN9A-205ENST00000454569 MAPK7Q13164 816 aa12.22□□□□□ -0.45
SCN9A-205ENST00000454569 HIC1Q14526 733 aa12.22□□□□□ -0.45
SCN9A-205ENST00000454569 MTFR1Q15390 333 aa12.22□□□□□ -0.45
SCN9A-205ENST00000454569 TARBP2Q15633 366 aaKnown RBP12.22□□□□□ -0.45
SCN9A-205ENST00000454569 MTERF2Q49AM1 385 aa12.22□□□□□ -0.45
SCN9A-205ENST00000454569 KMT5BQ4FZB7 885 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms