RNA–Protein interactions for RNA: ENST00000453634.5

CHKB-CPT1B-202, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHKB-CPT1B, Length 2,816 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-202ENST00000453634 SPDL1Q96EA4 605 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 FAM84BQ96KN1 310 aaPredicted RBP12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 NAP1L3Q99457 506 aaPredicted RBP12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 KCTD10Q9H3F6 313 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 L3MBTL1Q9Y468 752 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 PCDHA2Q9Y5H9 948 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 MAST2Q6P0Q8 1798 aa12.16□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 RGS16O15492 202 aaPredicted RBP12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 SNX3O60493 162 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 SMNDC1O75940 238 aaKnown RBP eCLIP12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 GFPT2O94808 682 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 UCHL3P15374 230 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 GBP1P32455 592 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 EPS15P42566 896 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 NCALDP61601 193 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 DR1Q01658 176 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 DHX34Q14147 1143 aaKnown RBP12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 SOGA3Q5TF21 947 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 VPS36Q86VN1 386 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 ZNF570Q96NI8 536 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 SELENOSQ9BQE4 189 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 SLC5A4Q9NY91 659 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 BCL9O00512 1426 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 GCKP35557 465 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 ENOX2Q16206 610 aaKnown RBP12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 FAM133BQ5BKY9 247 aaKnown RBP12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 MIS18BP1Q6P0N0 1132 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 KCNK18Q7Z418 384 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 FBXO33Q7Z6M2 555 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 DAAM2Q86T65 1068 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 REXO1Q8N1G1 1221 aaKnown RBP12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 SNX29Q8TEQ0 813 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 RNF25Q96BH1 459 aaPredicted RBP12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 PRMT1Q99873 361 aaKnown RBP12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 TRIM51Q9BSJ1 452 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 MCM9Q9NXL9 1143 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 AMFRQ9UKV5 643 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 DAAM1Q9Y4D1 1078 aa12.15□□□□□ -0.46
CHKB-CPT1B-202ENST00000453634 FGGP02679 453 aa12.15□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 BNIP1Q12981 228 aa12.15□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 CAPRIN2Q6IMN6 1127 aaKnown RBP12.15□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 TMEM47Q9BQJ4 181 aa12.15□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 PLCD4Q9BRC7 762 aa12.15□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 ARHGEF3Q9NR81 526 aa12.15□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 BMP2KQ9NSY1 1161 aaPredicted RBP12.15□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 SPATS2LQ9NUQ6 558 aaKnown RBP12.15□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 ABCF3Q9NUQ8 709 aa12.15□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.15□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 hCG_1984214I3L0E3 225 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 O00370 1275 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 UBOX5O94941 541 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 VIMP08670 466 aaKnown RBP12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 ALDH5A1P51649 535 aaPredicted RBP12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 KCNJ2P63252 427 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 LMNB2Q03252 620 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 ADAM9Q13443 819 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 HYIQ5T013 277 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 CHADLQ6NUI6 762 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 FRMD5Q7Z6J6 570 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 CCDC65Q8IXS2 484 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 ZNF713Q8N859 430 aaPredicted RBP12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 SAAL1Q96ER3 474 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 NUDT12Q9BQG2 462 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 CARD9Q9H257 536 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 USP15Q9Y4E8 981 aaPredicted RBP12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 CETN3O15182 167 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 LUC7L3O95232 432 aaKnown RBP12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 NTSR2O95665 410 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 USP17L8P0C7I0 530 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 COPS2P61201 443 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 IFI35P80217 286 aaPredicted RBP12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 CNGA2Q16280 664 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 ZDHHC24Q6UX98 284 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 TAOK1Q7L7X3 1001 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 IFT74Q96LB3 600 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 SH3GL3Q99963 347 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 AZI2Q9H6S1 392 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 ECT2Q9H8V3 914 aa12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 BSDC1Q9NW68 430 aaPredicted RBP12.14□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 COL4A1P02462 1669 aa12.13□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 USP17L3A6NCW0 530 aa12.13□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 USP17L4A6NCW7 530 aa12.13□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 POTEMA6NI47 508 aa12.13□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 SPDYE3A6NKU9 549 aa12.13□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 KIAA0391O15091 583 aaKnown RBP12.13□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 DDX3YO15523 660 aaKnown RBP12.13□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 SLC37A4O43826 429 aa12.13□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 TSPY3P0CV98 308 aa12.13□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 TSPY8P0CW00 308 aa12.13□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 PON1P27169 355 aa12.13□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 JAM2P57087 298 aa12.13□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 BLMHQ13867 455 aa12.13□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 SLC29A2Q14542 456 aa12.13□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 KIAA1755Q5JYT7 1200 aa12.13□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 MFSD5Q6N075 450 aa12.13□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 USP17L1Q7RTZ2 530 aa12.13□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 RBM46Q8TBY0 533 aaKnown RBP12.13□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 MTFR1LQ9H019 292 aa12.13□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 BIN2Q9UBW5 565 aaPredicted RBP12.13□□□□□ -0.47
CHKB-CPT1B-202ENST00000453634 PARP2Q9UGN5 583 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms