RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 NT5C3AQ9H0P0 336 aa16.33■□□□□ 0.2
NCKIPSD-207ENST00000453349 CSRNP2Q9H175 543 aa16.33■□□□□ 0.2
NCKIPSD-207ENST00000453349 CYP26B1Q9NR63 512 aa16.33■□□□□ 0.2
NCKIPSD-207ENST00000453349 ANKEF1Q9NU02 776 aa16.33■□□□□ 0.2
NCKIPSD-207ENST00000453349 CHMP5Q9NZZ3 219 aa16.33■□□□□ 0.2
NCKIPSD-207ENST00000453349 TBX21Q9UL17 535 aa16.33■□□□□ 0.2
NCKIPSD-207ENST00000453349 ZMYND8Q9ULU4 1186 aaPredicted RBP16.33■□□□□ 0.2
NCKIPSD-207ENST00000453349 PPME1Q9Y570 386 aa16.33■□□□□ 0.2
NCKIPSD-207ENST00000453349 MYH15Q9Y2K3 1946 aa16.33■□□□□ 0.2
NCKIPSD-207ENST00000453349 SLC26A4O43511 780 aa16.32■□□□□ 0.2
NCKIPSD-207ENST00000453349 RPLP2P05387 115 aaKnown RBP16.32■□□□□ 0.2
NCKIPSD-207ENST00000453349 TMOD1P28289 359 aa16.32■□□□□ 0.2
NCKIPSD-207ENST00000453349 MYH9P35579 1960 aaKnown RBP16.32■□□□□ 0.2
NCKIPSD-207ENST00000453349 BRCA2P51587 3418 aa16.32■□□□□ 0.2
NCKIPSD-207ENST00000453349 TBC1D8BQ0IIM8 1120 aa16.32■□□□□ 0.2
NCKIPSD-207ENST00000453349 TARBP2Q15633 366 aaKnown RBP16.32■□□□□ 0.2
NCKIPSD-207ENST00000453349 ZRSR1Q15695 479 aaKnown RBP16.32■□□□□ 0.2
NCKIPSD-207ENST00000453349 NME8Q8N427 588 aa16.32■□□□□ 0.2
NCKIPSD-207ENST00000453349 PIGOQ8TEQ8 1089 aa16.32■□□□□ 0.2
NCKIPSD-207ENST00000453349 CTAGE1Q96RT6 745 aa16.32■□□□□ 0.2
NCKIPSD-207ENST00000453349 LBHD1Q9BQE6 289 aaPredicted RBP16.32■□□□□ 0.2
NCKIPSD-207ENST00000453349 JPH2Q9BR39 696 aaPredicted RBP16.32■□□□□ 0.2
NCKIPSD-207ENST00000453349 PPP1R12CQ9BZL4 782 aa16.32■□□□□ 0.2
NCKIPSD-207ENST00000453349 RCOR1Q9UKL0 485 aa16.32■□□□□ 0.2
NCKIPSD-207ENST00000453349 KIAA1024Q9UPX6 916 aa16.32■□□□□ 0.2
NCKIPSD-207ENST00000453349 DNM3Q9UQ16 869 aa16.32■□□□□ 0.2
NCKIPSD-207ENST00000453349 KDM3AQ9Y4C1 1321 aa16.32■□□□□ 0.2
NCKIPSD-207ENST00000453349 ALPK3Q96L96 1907 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 SMIM35A0A1B0GVV1 85 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 TMEM150BA6NC51 233 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 ZBTB42B2RXF5 422 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 PITPNM1O00562 1244 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 ZBTB39O15060 712 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 CUTAO60888 179 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 TXLNAP40222 546 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 THPOP40225 353 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 ME1P48163 572 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 DNM2P50570 870 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 NPEPPSP55786 919 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 GRIN1Q05586 938 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 PLA2G4FQ68DD2 849 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 EFCAB12Q6NXP0 572 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 TMEM199Q8N511 208 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 KCTD17Q8N5Z5 321 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 METTL13Q8N6R0 699 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 RASSF8Q8NHQ8 419 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 DNAJB3Q8WWF6 145 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 SPATA32Q96LK8 384 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 CLIC6Q96NY7 704 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 SH2D3AQ9BRG2 576 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 MMTAG2Q9BU76 263 aaKnown RBP16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 NOC4LQ9BVI4 516 aaKnown RBP16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 SCAND2PQ9GZW5 306 aaPredicted RBP16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 DDX19AQ9NUU7 478 aaKnown RBP16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 CCDC39Q9UFE4 941 aa16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 DBR1Q9UK59 544 aaKnown RBP16.31■□□□□ 0.2
NCKIPSD-207ENST00000453349 A0A087WWV3 80 aa16.3■□□□□ 0.2
NCKIPSD-207ENST00000453349 CAND2O75155 1236 aa16.3■□□□□ 0.2
NCKIPSD-207ENST00000453349 C22orf31O95567 290 aa16.3■□□□□ 0.2
NCKIPSD-207ENST00000453349 CKBP12277 381 aa16.3■□□□□ 0.2
NCKIPSD-207ENST00000453349 CYP2C18P33260 490 aa16.3■□□□□ 0.2
NCKIPSD-207ENST00000453349 RFC5P40937 340 aa16.3■□□□□ 0.2
NCKIPSD-207ENST00000453349 POLGP54098 1239 aaPredicted RBP16.3■□□□□ 0.2
NCKIPSD-207ENST00000453349 ECM1Q16610 540 aa16.3■□□□□ 0.2
NCKIPSD-207ENST00000453349 SPECC1Q5M775 1068 aa16.3■□□□□ 0.2
NCKIPSD-207ENST00000453349 HYIQ5T013 277 aa16.3■□□□□ 0.2
NCKIPSD-207ENST00000453349 POTEGQ6S5H5 508 aa16.3■□□□□ 0.2
NCKIPSD-207ENST00000453349 RUFY4Q6ZNE9 571 aa16.3■□□□□ 0.2
NCKIPSD-207ENST00000453349 ZNF579Q8NAF0 562 aaKnown RBP16.3■□□□□ 0.2
NCKIPSD-207ENST00000453349 SLC7A3Q8WY07 619 aa16.3■□□□□ 0.2
NCKIPSD-207ENST00000453349 DHX38Q92620 1227 aaKnown RBP16.3■□□□□ 0.2
NCKIPSD-207ENST00000453349 ZBTB10Q96DT7 871 aa16.3■□□□□ 0.2
NCKIPSD-207ENST00000453349 CCSER1Q9C0I3 900 aa16.3■□□□□ 0.2
NCKIPSD-207ENST00000453349 SUGCTQ9HAC7 445 aa16.3■□□□□ 0.2
NCKIPSD-207ENST00000453349 WDR81Q562E7 1941 aa16.29■□□□□ 0.2
NCKIPSD-207ENST00000453349 ARHGEF35A5YM69 484 aa16.29■□□□□ 0.2
NCKIPSD-207ENST00000453349 H0YGN5 161 aa16.29■□□□□ 0.2
NCKIPSD-207ENST00000453349 M0QZ92 97 aa16.29■□□□□ 0.2
NCKIPSD-207ENST00000453349 MAFO75444 373 aaPredicted RBP16.29■□□□□ 0.2
NCKIPSD-207ENST00000453349 PARNO95453 639 aaKnown RBP16.29■□□□□ 0.2
NCKIPSD-207ENST00000453349 SELPP16109 830 aa16.29■□□□□ 0.2
NCKIPSD-207ENST00000453349 RARRES1P49788 294 aa16.29■□□□□ 0.2
NCKIPSD-207ENST00000453349 CCL23P55773 120 aa16.29■□□□□ 0.2
NCKIPSD-207ENST00000453349 RBL2Q08999 1139 aa16.29■□□□□ 0.2
NCKIPSD-207ENST00000453349 TRIM71Q2Q1W2 868 aaKnown RBP16.29■□□□□ 0.2
NCKIPSD-207ENST00000453349 ZNF618Q5T7W0 954 aa16.29■□□□□ 0.2
NCKIPSD-207ENST00000453349 IER5Q5VY09 327 aa16.29■□□□□ 0.2
NCKIPSD-207ENST00000453349 MFSD5Q6N075 450 aa16.29■□□□□ 0.2
NCKIPSD-207ENST00000453349 RPAINQ86UA6 219 aa16.29■□□□□ 0.2
NCKIPSD-207ENST00000453349 BADQ92934 168 aa16.29■□□□□ 0.2
NCKIPSD-207ENST00000453349 EPSTI1Q96J88 318 aa16.29■□□□□ 0.2
NCKIPSD-207ENST00000453349 CEP89Q96ST8 783 aa16.29■□□□□ 0.2
NCKIPSD-207ENST00000453349 PLIN2Q99541 437 aa16.29■□□□□ 0.2
NCKIPSD-207ENST00000453349 FAM49AQ9H0Q0 323 aaPredicted RBP16.29■□□□□ 0.2
NCKIPSD-207ENST00000453349 PCDHA7Q9UN72 937 aa16.29■□□□□ 0.2
NCKIPSD-207ENST00000453349 KAT6AQ92794 2004 aa16.28■□□□□ 0.2
NCKIPSD-207ENST00000453349 RSPH10B2B2RC85 870 aa16.28■□□□□ 0.2
NCKIPSD-207ENST00000453349 E9PMD0 336 aa16.28■□□□□ 0.2
NCKIPSD-207ENST00000453349 GAS2O43903 313 aaKnown RBP16.28■□□□□ 0.2
NCKIPSD-207ENST00000453349 DGAT1O75907 488 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms