RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 HERC4Q5GLZ8 1057 aaPredicted RBP10.07□□□□□ -0.8
DEPDC1B-202ENST00000453022 ABHD15Q6UXT9 468 aa10.07□□□□□ -0.8
DEPDC1B-202ENST00000453022 HFE2Q6ZVN8 426 aa10.07□□□□□ -0.8
DEPDC1B-202ENST00000453022 POF1BQ8WVV4 589 aa10.07□□□□□ -0.8
DEPDC1B-202ENST00000453022 FAM217BQ9NTX9 383 aaPredicted RBP10.07□□□□□ -0.8
DEPDC1B-202ENST00000453022 RBM28Q9NW13 759 aaKnown RBP10.07□□□□□ -0.8
DEPDC1B-202ENST00000453022 HCSTQ9UBK5 93 aa10.07□□□□□ -0.8
DEPDC1B-202ENST00000453022 NOC2LQ9Y3T9 749 aaKnown RBP10.07□□□□□ -0.8
DEPDC1B-202ENST00000453022 IGLV3-22A0A075B6J6 115 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 SMCO2A6NFE2 343 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 FAM86B1E9PN63 330 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 DDX39AO00148 427 aaKnown RBP10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 DHX15O43143 795 aaKnown RBP10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 ZBTB43O43298 467 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 FOSP01100 380 aaPredicted RBP10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 FAM86B2P0C5J1 330 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 STAG3L1P0CL83 205 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 ATP4AP20648 1035 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 CDC27P30260 824 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 NRIP1P48552 1158 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 NDUFV1P49821 464 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 SLC26A2P50443 739 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 RTN1Q16799 776 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 ADCK5Q3MIX3 580 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 SKAP1Q86WV1 359 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 RNF135Q8IUD6 432 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 TEX2Q8IWB9 1127 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 KIAA0319LQ8IZA0 1049 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 NME8Q8N427 588 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 EFHBQ8N7U6 833 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 SMRP1Q8NCR6 262 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 ATP8B4Q8TF62 1192 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 CRYGNQ8WXF5 182 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 TNPO1Q92973 898 aaKnown RBP10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 NEK1Q96PY6 1258 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 POP1Q99575 1024 aaKnown RBP10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 BARHL2Q9NY43 387 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 BARX2Q9UMQ3 279 aaPredicted RBP10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 V9GY48 417 aaPredicted RBP10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 VPS13AQ96RL7 3174 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 CFAP54Q96N23 3096 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 COL1A2P08123 1366 aa10.06□□□□□ -0.8
DEPDC1B-202ENST00000453022 hCG_1984214I3L0E3 225 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 HBP1O60381 514 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 IBSPP21815 317 aaPredicted RBP10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 RBM10P98175 930 aaKnown RBP10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 NFX1Q12986 1120 aaKnown RBP10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 COASYQ13057 564 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 AP3B2Q13367 1082 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 SYNE3Q6ZMZ3 975 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 NIPA1Q7RTP0 329 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 RBM23Q86U06 439 aaKnown RBP10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 ALYREFQ86V81 257 aaKnown RBP10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 RASEFQ8IZ41 740 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 ZNF713Q8N859 430 aaPredicted RBP10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 VN1R2Q8NFZ6 395 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 FBXL18Q96ME1 805 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 UPF3BQ9BZI7 483 aaKnown RBP10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 LRFN2Q9ULH4 789 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 GINS2Q9Y248 185 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 DMDP11532 3685 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 KLF18A0A0U1RQI7 1052 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 GOLGA8AA7E2F4 631 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 GOLGA8BA8MQT2 603 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 C9IYK1 514 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 BACH1O14867 736 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 PPFIA3O75145 1194 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 RPS6KA5O75582 802 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 C22orf31O95567 290 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 NHLH1Q02575 133 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 FAM102BQ5T8I3 360 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 FAM160B1Q5W0V3 765 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 DHX32Q7L7V1 743 aaKnown RBP10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 FAM228AQ86W67 206 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 PLA2G4DQ86XP0 818 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 PPP2R3CQ969Q6 453 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 PPP1R16BQ96T49 567 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 ADAM2Q99965 735 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 ZNF302Q9NR11 478 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 RGS18Q9NS28 235 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 ST3GAL5Q9UNP4 418 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 USP15Q9Y4E8 981 aaPredicted RBP10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 PCDHB7Q9Y5E2 793 aa10.05□□□□□ -0.8
DEPDC1B-202ENST00000453022 DENND3A2RUS2 1198 aa10.04□□□□□ -0.8
DEPDC1B-202ENST00000453022 TBKBP1A7MCY6 615 aa10.04□□□□□ -0.8
DEPDC1B-202ENST00000453022 LOC730098B7Z3J9 87 aa10.04□□□□□ -0.8
DEPDC1B-202ENST00000453022 IPO5O00410 1097 aaKnown RBP10.04□□□□□ -0.8
DEPDC1B-202ENST00000453022 VTNP04004 478 aa10.04□□□□□ -0.8
DEPDC1B-202ENST00000453022 CYP3A4P08684 503 aa10.04□□□□□ -0.8
DEPDC1B-202ENST00000453022 FGFR1P11362 822 aa10.04□□□□□ -0.8
DEPDC1B-202ENST00000453022 ZNF76P36508 570 aa10.04□□□□□ -0.8
DEPDC1B-202ENST00000453022 KIZQ2M2Z5 673 aa10.04□□□□□ -0.8
DEPDC1B-202ENST00000453022 ZNF484Q5JVG2 852 aa10.04□□□□□ -0.8
DEPDC1B-202ENST00000453022 RNF20Q5VTR2 975 aa10.04□□□□□ -0.8
DEPDC1B-202ENST00000453022 JAKMIP3Q5VZ66 844 aa10.04□□□□□ -0.8
DEPDC1B-202ENST00000453022 SWSAP1Q6NVH7 229 aa10.04□□□□□ -0.8
DEPDC1B-202ENST00000453022 PDXDC2PQ6P474 469 aa10.04□□□□□ -0.8
DEPDC1B-202ENST00000453022 SLC24A5Q71RS6 500 aa10.04□□□□□ -0.8
DEPDC1B-202ENST00000453022 OSMRQ99650 979 aa10.04□□□□□ -0.8
DEPDC1B-202ENST00000453022 KCNH6Q9H252 994 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms