RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 CCDC39Q9UFE4 941 aa13.29□□□□□ -0.28
LINC00339-205ENST00000452322 KAT6AQ92794 2004 aa13.28□□□□□ -0.28
LINC00339-205ENST00000452322 A0A1W2PQ27 194 aa13.28□□□□□ -0.28
LINC00339-205ENST00000452322 A0A1W2PQ64 194 aa13.28□□□□□ -0.28
LINC00339-205ENST00000452322 A0A1W2PQD8 194 aa13.28□□□□□ -0.28
LINC00339-205ENST00000452322 MBLAC1A4D2B0 266 aaPredicted RBP13.28□□□□□ -0.28
LINC00339-205ENST00000452322 TMEM150BA6NC51 233 aa13.28□□□□□ -0.28
LINC00339-205ENST00000452322 TLR3O15455 904 aaKnown RBP13.28□□□□□ -0.28
LINC00339-205ENST00000452322 B4GALT4O60513 344 aa13.28□□□□□ -0.28
LINC00339-205ENST00000452322 PQBP1O60828 265 aaKnown RBP13.28□□□□□ -0.28
LINC00339-205ENST00000452322 CD4P01730 458 aa13.28□□□□□ -0.28
LINC00339-205ENST00000452322 RARRES1P49788 294 aa13.28□□□□□ -0.28
LINC00339-205ENST00000452322 IGBP1P78318 339 aa13.28□□□□□ -0.28
LINC00339-205ENST00000452322 HIC1Q14526 733 aa13.28□□□□□ -0.28
LINC00339-205ENST00000452322 KARSQ15046 597 aaKnown RBP13.28□□□□□ -0.28
LINC00339-205ENST00000452322 ZRSR1Q15695 479 aaKnown RBP13.28□□□□□ -0.28
LINC00339-205ENST00000452322 MTERF2Q49AM1 385 aa13.28□□□□□ -0.28
LINC00339-205ENST00000452322 RESP18Q5W5W9 173 aa13.28□□□□□ -0.28
LINC00339-205ENST00000452322 PLA2G4FQ68DD2 849 aa13.28□□□□□ -0.28
LINC00339-205ENST00000452322 TMEM87AQ8NBN3 555 aa13.28□□□□□ -0.28
LINC00339-205ENST00000452322 RASSF8Q8NHQ8 419 aa13.28□□□□□ -0.28
LINC00339-205ENST00000452322 PIGOQ8TEQ8 1089 aa13.28□□□□□ -0.28
LINC00339-205ENST00000452322 CEP170P1Q96L14 293 aa13.28□□□□□ -0.28
LINC00339-205ENST00000452322 CYP26B1Q9NR63 512 aa13.28□□□□□ -0.28
LINC00339-205ENST00000452322 TRMT13Q9NUP7 481 aaKnown RBP13.28□□□□□ -0.28
LINC00339-205ENST00000452322 FAM13BQ9NYF5 915 aa13.28□□□□□ -0.28
LINC00339-205ENST00000452322 TUBE1Q9UJT0 475 aa13.28□□□□□ -0.28
LINC00339-205ENST00000452322 DBR1Q9UK59 544 aaKnown RBP13.28□□□□□ -0.28
LINC00339-205ENST00000452322 DNM3Q9UQ16 869 aa13.28□□□□□ -0.28
LINC00339-205ENST00000452322 LOXHD1Q8IVV2 1947 aa13.28□□□□□ -0.28
LINC00339-205ENST00000452322 ARID2Q68CP9 1835 aa13.27□□□□□ -0.28
LINC00339-205ENST00000452322 DCDC2CA8MYV0 355 aa13.27□□□□□ -0.29
LINC00339-205ENST00000452322 ZBTB39O15060 712 aa13.27□□□□□ -0.29
LINC00339-205ENST00000452322 TREHO43280 583 aa13.27□□□□□ -0.29
LINC00339-205ENST00000452322 PLCG1P19174 1290 aa13.27□□□□□ -0.29
LINC00339-205ENST00000452322 CMA1P23946 247 aa13.27□□□□□ -0.29
LINC00339-205ENST00000452322 NPEPPSP55786 919 aa13.27□□□□□ -0.29
LINC00339-205ENST00000452322 TLE2Q04725 743 aa13.27□□□□□ -0.29
LINC00339-205ENST00000452322 PTGISQ16647 500 aa13.27□□□□□ -0.29
LINC00339-205ENST00000452322 XKR9Q5GH70 373 aa13.27□□□□□ -0.29
LINC00339-205ENST00000452322 MARCH8Q5T0T0 291 aa13.27□□□□□ -0.29
LINC00339-205ENST00000452322 TRAPPC12Q8WVT3 735 aa13.27□□□□□ -0.29
LINC00339-205ENST00000452322 CCDC43Q96MW1 224 aaKnown RBP13.27□□□□□ -0.29
LINC00339-205ENST00000452322 CEP89Q96ST8 783 aa13.27□□□□□ -0.29
LINC00339-205ENST00000452322 NOD1Q9Y239 953 aa13.27□□□□□ -0.29
LINC00339-205ENST00000452322 ATP11BQ9Y2G3 1177 aa13.27□□□□□ -0.29
LINC00339-205ENST00000452322 ALPK3Q96L96 1907 aa13.27□□□□□ -0.29
LINC00339-205ENST00000452322 E9PMD0 336 aa13.26□□□□□ -0.29
LINC00339-205ENST00000452322 MAGEB2O15479 319 aa13.26□□□□□ -0.29
LINC00339-205ENST00000452322 C22orf31O95567 290 aa13.26□□□□□ -0.29
LINC00339-205ENST00000452322 EYA4O95677 639 aa13.26□□□□□ -0.29
LINC00339-205ENST00000452322 KLRC1P26715 233 aa13.26□□□□□ -0.29
LINC00339-205ENST00000452322 RFC5P40937 340 aa13.26□□□□□ -0.29
LINC00339-205ENST00000452322 ZNF200P98182 395 aaPredicted RBP13.26□□□□□ -0.29
LINC00339-205ENST00000452322 TBC1D8BQ0IIM8 1120 aa13.26□□□□□ -0.29
LINC00339-205ENST00000452322 PTK7Q13308 1070 aa13.26□□□□□ -0.29
LINC00339-205ENST00000452322 TAF2Q6P1X5 1199 aa13.26□□□□□ -0.29
LINC00339-205ENST00000452322 MTHFD1LQ6UB35 978 aa13.26□□□□□ -0.29
LINC00339-205ENST00000452322 CCDC73Q6ZRK6 1079 aa13.26□□□□□ -0.29
LINC00339-205ENST00000452322 KCNK18Q7Z418 384 aa13.26□□□□□ -0.29
LINC00339-205ENST00000452322 SERINC5Q86VE9 423 aa13.26□□□□□ -0.29
LINC00339-205ENST00000452322 EXOC8Q8IYI6 725 aa13.26□□□□□ -0.29
LINC00339-205ENST00000452322 GBP4Q96PP9 640 aa13.26□□□□□ -0.29
LINC00339-205ENST00000452322 CTAGE1Q96RT6 745 aa13.26□□□□□ -0.29
LINC00339-205ENST00000452322 JPH2Q9BR39 696 aaPredicted RBP13.26□□□□□ -0.29
LINC00339-205ENST00000452322 SH2D3AQ9BRG2 576 aa13.26□□□□□ -0.29
LINC00339-205ENST00000452322 TRPV6Q9H1D0 765 aa13.26□□□□□ -0.29
LINC00339-205ENST00000452322 BHMT2Q9H2M3 363 aa13.26□□□□□ -0.29
LINC00339-205ENST00000452322 DHX33Q9H6R0 707 aaKnown RBP13.26□□□□□ -0.29
LINC00339-205ENST00000452322 STK17AQ9UEE5 414 aa13.26□□□□□ -0.29
LINC00339-205ENST00000452322 PCDHA2Q9Y5H9 948 aa13.26□□□□□ -0.29
LINC00339-205ENST00000452322 TRIP12Q14669 1992 aaPredicted RBP13.25□□□□□ -0.29
LINC00339-205ENST00000452322 A0A087WWV3 80 aa13.25□□□□□ -0.29
LINC00339-205ENST00000452322 A0A087X0B3 334 aa13.25□□□□□ -0.29
LINC00339-205ENST00000452322 IGKV6-21A0A0C4DH24 114 aa13.25□□□□□ -0.29
LINC00339-205ENST00000452322 FAM237AA0A1B0GTK4 181 aa13.25□□□□□ -0.29
LINC00339-205ENST00000452322 ARHGEF35A5YM69 484 aa13.25□□□□□ -0.29
LINC00339-205ENST00000452322 GOLGA6L4A6NEF3 574 aa13.25□□□□□ -0.29
LINC00339-205ENST00000452322 MAFO75444 373 aaPredicted RBP13.25□□□□□ -0.29
LINC00339-205ENST00000452322 DGAT1O75907 488 aa13.25□□□□□ -0.29
LINC00339-205ENST00000452322 RPLP2P05387 115 aaKnown RBP13.25□□□□□ -0.29
LINC00339-205ENST00000452322 CLTBP09497 229 aa13.25□□□□□ -0.29
LINC00339-205ENST00000452322 POLGP54098 1239 aaPredicted RBP13.25□□□□□ -0.29
LINC00339-205ENST00000452322 FAAP100Q0VG06 881 aa13.25□□□□□ -0.29
LINC00339-205ENST00000452322 RRAGBQ5VZM2 374 aa13.25□□□□□ -0.29
LINC00339-205ENST00000452322 RETREG2Q8NC44 543 aa13.25□□□□□ -0.29
LINC00339-205ENST00000452322 SLC7A3Q8WY07 619 aa13.25□□□□□ -0.29
LINC00339-205ENST00000452322 MRPS27Q92552 414 aaKnown RBP13.25□□□□□ -0.29
LINC00339-205ENST00000452322 PLIN2Q99541 437 aa13.25□□□□□ -0.29
LINC00339-205ENST00000452322 PYM1Q9BRP8 204 aaKnown RBP13.25□□□□□ -0.29
LINC00339-205ENST00000452322 BLOC1S4Q9NUP1 217 aa13.25□□□□□ -0.29
LINC00339-205ENST00000452322 HPSEQ9Y251 543 aa13.25□□□□□ -0.29
LINC00339-205ENST00000452322 SMIM35A0A1B0GVV1 85 aa13.24□□□□□ -0.29
LINC00339-205ENST00000452322 GAS2O43903 313 aaKnown RBP13.24□□□□□ -0.29
LINC00339-205ENST00000452322 PLA2G4BP0C869 781 aa13.24□□□□□ -0.29
LINC00339-205ENST00000452322 CYP2C9P11712 490 aa13.24□□□□□ -0.29
LINC00339-205ENST00000452322 PFKFB1P16118 471 aa13.24□□□□□ -0.29
LINC00339-205ENST00000452322 STAT6P42226 847 aa13.24□□□□□ -0.29
LINC00339-205ENST00000452322 RGS19P49795 217 aa13.24□□□□□ -0.29
LINC00339-205ENST00000452322 E2F4Q16254 413 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms