RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 ANKRD1Q15327 319 aa24.44■■□□□ 1.5
C9orf3-208ENST00000451893 TMEM192Q8IY95 271 aa24.44■■□□□ 1.5
C9orf3-208ENST00000451893 METTL13Q8N6R0 699 aa24.44■■□□□ 1.5
C9orf3-208ENST00000451893 CRYGNQ8WXF5 182 aa24.44■■□□□ 1.5
C9orf3-208ENST00000451893 BBXQ8WY36 941 aaPredicted RBP24.44■■□□□ 1.5
C9orf3-208ENST00000451893 TEKT3Q9BXF9 490 aa24.44■■□□□ 1.5
C9orf3-208ENST00000451893 SLKQ9H2G2 1235 aaPredicted RBP24.44■■□□□ 1.5
C9orf3-208ENST00000451893 LRFN2Q9ULH4 789 aa24.44■■□□□ 1.5
C9orf3-208ENST00000451893 RWDD3Q9Y3V2 267 aa24.44■■□□□ 1.5
C9orf3-208ENST00000451893 SQORQ9Y6N5 450 aa24.44■■□□□ 1.5
C9orf3-208ENST00000451893 RALGAPA2Q2PPJ7 1873 aa24.44■■□□□ 1.5
C9orf3-208ENST00000451893 ENPP3O14638 875 aa24.43■■□□□ 1.5
C9orf3-208ENST00000451893 ADAMTS3O15072 1205 aa24.43■■□□□ 1.5
C9orf3-208ENST00000451893 DHX15O43143 795 aaKnown RBP24.43■■□□□ 1.5
C9orf3-208ENST00000451893 STAG3L1P0CL83 205 aa24.43■■□□□ 1.5
C9orf3-208ENST00000451893 CIITAP33076 1130 aa24.43■■□□□ 1.5
C9orf3-208ENST00000451893 USP11P51784 963 aa24.43■■□□□ 1.5
C9orf3-208ENST00000451893 BTG3Q14201 252 aaPredicted RBP24.43■■□□□ 1.5
C9orf3-208ENST00000451893 BLIDQ8IZY5 108 aa24.43■■□□□ 1.5
C9orf3-208ENST00000451893 TBCKQ8TEA7 893 aa24.43■■□□□ 1.5
C9orf3-208ENST00000451893 FAM167AQ96KS9 214 aa24.43■■□□□ 1.5
C9orf3-208ENST00000451893 ADGRA3Q8IWK6 1321 aa24.42■■□□□ 1.5
C9orf3-208ENST00000451893 LRCH2Q5VUJ6 765 aa24.42■■□□□ 1.5
C9orf3-208ENST00000451893 PPP1R16BQ96T49 567 aa24.42■■□□□ 1.5
C9orf3-208ENST00000451893 AGO3Q9H9G7 860 aaKnown RBP24.42■■□□□ 1.5
C9orf3-208ENST00000451893 PADI3Q9ULW8 664 aa24.42■■□□□ 1.5
C9orf3-208ENST00000451893 IGSF9BQ9UPX0 1349 aa24.41■■□□□ 1.5
C9orf3-208ENST00000451893 CD2BP2O95400 341 aaKnown RBP24.41■■□□□ 1.5
C9orf3-208ENST00000451893 KCNQ1P51787 676 aa24.41■■□□□ 1.5
C9orf3-208ENST00000451893 TIGD5Q53EQ6 642 aa24.41■■□□□ 1.5
C9orf3-208ENST00000451893 EP400NLQ6ZTU2 488 aa24.41■■□□□ 1.5
C9orf3-208ENST00000451893 ZSCAN31Q96LW9 406 aaPredicted RBP24.41■■□□□ 1.5
C9orf3-208ENST00000451893 MAP7D2Q96T17 732 aa24.41■■□□□ 1.5
C9orf3-208ENST00000451893 DISC1Q9NRI5 854 aa24.41■■□□□ 1.5
C9orf3-208ENST00000451893 WDR81Q562E7 1941 aa24.4■■□□□ 1.5
C9orf3-208ENST00000451893 DENND3A2RUS2 1198 aa24.4■■□□□ 1.5
C9orf3-208ENST00000451893 RPS6KA5O75582 802 aa24.4■■□□□ 1.5
C9orf3-208ENST00000451893 TMOD1P28289 359 aa24.4■■□□□ 1.5
C9orf3-208ENST00000451893 JAK3P52333 1124 aa24.4■■□□□ 1.5
C9orf3-208ENST00000451893 TMEM266Q2M3C6 531 aa24.4■■□□□ 1.5
C9orf3-208ENST00000451893 GALNT17Q6IS24 598 aa24.4■■□□□ 1.5
C9orf3-208ENST00000451893 MRPL38Q96DV4 380 aaKnown RBP24.4■■□□□ 1.5
C9orf3-208ENST00000451893 SCLT1Q96NL6 688 aa24.4■■□□□ 1.5
C9orf3-208ENST00000451893 NRBP2Q9NSY0 501 aa24.4■■□□□ 1.5
C9orf3-208ENST00000451893 RNF216Q9NWF9 866 aaPredicted RBP24.4■■□□□ 1.5
C9orf3-208ENST00000451893 AKT3Q9Y243 479 aa24.4■■□□□ 1.5
C9orf3-208ENST00000451893 MAFBQ9Y5Q3 323 aaPredicted RBP24.4■■□□□ 1.5
C9orf3-208ENST00000451893 TTC3P53804 2025 aa24.4■■□□□ 1.5
C9orf3-208ENST00000451893 KDM3AQ9Y4C1 1321 aa24.39■■□□□ 1.5
C9orf3-208ENST00000451893 CCDC194A0A1B0GVG4 234 aa24.39■■□□□ 1.49
C9orf3-208ENST00000451893 H3BNC9 293 aa24.39■■□□□ 1.49
C9orf3-208ENST00000451893 MSH4O15457 936 aa24.39■■□□□ 1.49
C9orf3-208ENST00000451893 SFNP31947 248 aa24.39■■□□□ 1.49
C9orf3-208ENST00000451893 NONOQ15233 471 aaKnown RBP eCLIP24.39■■□□□ 1.49
C9orf3-208ENST00000451893 NPAS4Q8IUM7 802 aa24.39■■□□□ 1.49
C9orf3-208ENST00000451893 RIT2Q99578 217 aa24.39■■□□□ 1.49
C9orf3-208ENST00000451893 C11orf84Q9BUA3 381 aaPredicted RBP24.39■■□□□ 1.49
C9orf3-208ENST00000451893 LIMCH1Q9UPQ0 1083 aa24.39■■□□□ 1.49
C9orf3-208ENST00000451893 COL4A6Q14031 1691 aa24.38■■□□□ 1.49
C9orf3-208ENST00000451893 MAGEB2O15479 319 aa24.38■■□□□ 1.49
C9orf3-208ENST00000451893 MARCH6O60337 910 aa24.38■■□□□ 1.49
C9orf3-208ENST00000451893 HSP90AA1P07900 732 aaKnown RBP24.38■■□□□ 1.49
C9orf3-208ENST00000451893 MIER3Q7Z3K6 550 aa24.38■■□□□ 1.49
C9orf3-208ENST00000451893 KRT25Q7Z3Z0 450 aa24.38■■□□□ 1.49
C9orf3-208ENST00000451893 FAM177A1Q8N128 213 aaPredicted RBP24.38■■□□□ 1.49
C9orf3-208ENST00000451893 GPR182O15218 404 aa24.37■■□□□ 1.49
C9orf3-208ENST00000451893 CSPG5O95196 566 aa24.37■■□□□ 1.49
C9orf3-208ENST00000451893 OATP04181 439 aa24.37■■□□□ 1.49
C9orf3-208ENST00000451893 PAN2Q504Q3 1202 aaKnown RBP24.37■■□□□ 1.49
C9orf3-208ENST00000451893 SPOUT1Q5T280 376 aaKnown RBP24.37■■□□□ 1.49
C9orf3-208ENST00000451893 KIAA0319LQ8IZA0 1049 aa24.37■■□□□ 1.49
C9orf3-208ENST00000451893 SH2B1Q9NRF2 756 aaPredicted RBP24.37■■□□□ 1.49
C9orf3-208ENST00000451893 PCDHB7Q9Y5E2 793 aa24.37■■□□□ 1.49
C9orf3-208ENST00000451893 C22orf31O95567 290 aa24.36■■□□□ 1.49
C9orf3-208ENST00000451893 VTNP04004 478 aa24.36■■□□□ 1.49
C9orf3-208ENST00000451893 RB1P06400 928 aa24.36■■□□□ 1.49
C9orf3-208ENST00000451893 ATP4AP20648 1035 aa24.36■■□□□ 1.49
C9orf3-208ENST00000451893 PRKCEQ02156 737 aa24.36■■□□□ 1.49
C9orf3-208ENST00000451893 SCRN1Q12765 414 aa24.36■■□□□ 1.49
C9orf3-208ENST00000451893 KIZQ2M2Z5 673 aa24.36■■□□□ 1.49
C9orf3-208ENST00000451893 DAGLBQ8NCG7 672 aa24.36■■□□□ 1.49
C9orf3-208ENST00000451893 BANK1Q8NDB2 785 aa24.36■■□□□ 1.49
C9orf3-208ENST00000451893 WASF1Q92558 559 aa24.36■■□□□ 1.49
C9orf3-208ENST00000451893 LENG9Q96B70 501 aa24.36■■□□□ 1.49
C9orf3-208ENST00000451893 INTS4Q96HW7 963 aaKnown RBP24.36■■□□□ 1.49
C9orf3-208ENST00000451893 AIFM3Q96NN9 605 aa24.36■■□□□ 1.49
C9orf3-208ENST00000451893 OSMRQ99650 979 aa24.36■■□□□ 1.49
C9orf3-208ENST00000451893 UBE2ZQ9H832 354 aaPredicted RBP24.36■■□□□ 1.49
C9orf3-208ENST00000451893 DDX25Q9UHL0 483 aaKnown RBP24.36■■□□□ 1.49
C9orf3-208ENST00000451893 KCNJ14Q9UNX9 436 aa24.36■■□□□ 1.49
C9orf3-208ENST00000451893 TRANK1O15050 2925 aa24.36■■□□□ 1.49
C9orf3-208ENST00000451893 DGKIO75912 1065 aa24.35■■□□□ 1.49
C9orf3-208ENST00000451893 TDP2O95551 362 aa24.35■■□□□ 1.49
C9orf3-208ENST00000451893 BMP1P13497 986 aa24.35■■□□□ 1.49
C9orf3-208ENST00000451893 BMPR1AP36894 532 aa24.35■■□□□ 1.49
C9orf3-208ENST00000451893 CRYBB1P53674 252 aaPredicted RBP24.35■■□□□ 1.49
C9orf3-208ENST00000451893 AK2P54819 239 aa24.35■■□□□ 1.49
C9orf3-208ENST00000451893 CUL4AQ13619 759 aa24.35■■□□□ 1.49
C9orf3-208ENST00000451893 INF2Q27J81 1249 aa24.35■■□□□ 1.49
C9orf3-208ENST00000451893 LETM2Q2VYF4 491 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms