RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGB3P22-202ENST00000451823 NPHP4O75161 1426 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P22-202ENST00000451823 PHLPP2Q6ZVD8 1323 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 A0A1W2PQJ5 194 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 CCDC69A6NI79 296 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 HTATSF1O43719 755 aaKnown RBP4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 TADA3O75528 432 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 RPS6KA5O75582 802 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 SKILP12757 684 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 ERCC3P19447 782 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 PDCP20941 246 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 GSDMDP57764 484 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 PTH1RQ03431 593 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 PLP2Q04941 152 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 MTX1Q13505 466 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 DHX8Q14562 1220 aaKnown RBP4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 NR1I3Q14994 352 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 TRIM65Q6PJ69 517 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 ZC3H14Q6PJT7 736 aaKnown RBP4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 C11orf57Q6ZUT1 292 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 NME9Q86XW9 330 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 JAMLQ86YT9 394 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 REXO1L1PQ8IX06 675 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 CNTROBQ8N137 903 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 TXLNBQ8N3L3 684 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 NAT16Q8N8M0 369 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 ENGASEQ8NFI3 743 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 MAP4K1Q92918 833 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 BPIFA3Q9BQP9 254 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 NT5C1AQ9BXI3 368 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 BABAM1Q9NWV8 329 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 ORC3Q9UBD5 711 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 SUCOQ9UBS9 1254 aaKnown RBP4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 RCOR1Q9UKL0 485 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 TPCN1Q9ULQ1 816 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 MED23Q9ULK4 1368 aa4.78□□□□□ -1.64
HMGB3P22-202ENST00000451823 FMN2Q9NZ56 1722 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 TSPOAP1O95153 1857 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 NEDD4P46934 1319 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 MRC1P22897 1456 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 NEO1Q92859 1461 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 FFAR3O14843 346 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 TBC1D8O95759 1140 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 TP53P04637 393 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 CPA1P15085 419 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 CASTP20810 708 aaKnown RBP4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 LIMS1P48059 325 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 KCNC1P48547 511 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 MAPKAPK2P49137 400 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 FOXO4P98177 505 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 TOB2Q14106 344 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 SAFB2Q14151 953 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 CAMK4Q16566 473 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 STX1AQ16623 288 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 ERCC6LQ2NKX8 1250 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 ANKRD39Q53RE8 183 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 LARP1BQ659C4 914 aaKnown RBP4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 CWF19L1Q69YN2 538 aaKnown RBP4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 ATL3Q6DD88 541 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 MCM10Q7L590 875 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 FILIP1Q7Z7B0 1213 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 CKAP2LQ8IYA6 745 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 ADGRG2Q8IZP9 1017 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 NLGN1Q8N2Q7 840 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 PPP1R13BQ96KQ4 1090 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 SPATA32Q96LK8 384 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 SRRTQ9BXP5 876 aaKnown RBP4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 TMX1Q9H3N1 280 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 TNFRSF12AQ9NP84 129 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 LUC7LQ9NQ29 371 aaKnown RBP4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 HCFC2Q9Y5Z7 792 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 LRRFIP2Q9Y608 721 aaKnown RBP4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 CYP46A1Q9Y6A2 500 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 V9GYY5 206 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 NWD1Q149M9 1564 aa4.77□□□□□ -1.65
HMGB3P22-202ENST00000451823 VPS37CA5D8V6 355 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 EFCAB8A8MWE9 144 aa4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 F8W031 263 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 MAP2K7O14733 419 aa4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 SLC27A2O14975 620 aa4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 PRICKLE3O43900 615 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 GLRX3O76003 335 aaKnown RBP4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 TPM1P09493 284 aa4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 ACRP10323 421 aa4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 PFKLP17858 780 aa4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 RPS6KB1P23443 525 aa4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 MMP14P50281 582 aa4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 SLURP1P55000 103 aa4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 TPM4P67936 248 aa4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 ZNF200P98182 395 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 NCAPD2Q15021 1401 aa4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 ANKRD1Q15327 319 aa4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 CCDC158Q5M9N0 1113 aa4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 TDRD10Q5VZ19 366 aaKnown RBP4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 CREB3L3Q68CJ9 461 aa4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 BICRALQ6AI39 1079 aa4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 ARMCX5Q6P1M9 558 aa4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 FAM173BQ6P4H8 233 aa4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 CTR9Q6PD62 1173 aa4.76□□□□□ -1.65
HMGB3P22-202ENST00000451823 RICTORQ6R327 1708 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms