RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ARSHQ5FYA8 562 aa21.73■■□□□ 1.07
SGCE-207ENST00000447873 PADI6Q6TGC4 694 aa21.73■■□□□ 1.07
SGCE-207ENST00000447873 CTU1Q7Z7A3 348 aaKnown RBP21.73■■□□□ 1.07
SGCE-207ENST00000447873 SPATA20Q8TB22 786 aa21.73■■□□□ 1.07
SGCE-207ENST00000447873 BBXQ8WY36 941 aaPredicted RBP21.73■■□□□ 1.07
SGCE-207ENST00000447873 GSDMAQ96QA5 445 aa21.73■■□□□ 1.07
SGCE-207ENST00000447873 C16orf70Q9BSU1 422 aa21.73■■□□□ 1.07
SGCE-207ENST00000447873 XPNPEP3Q9NQH7 507 aa21.73■■□□□ 1.07
SGCE-207ENST00000447873 SYNRGQ9UMZ2 1314 aa21.73■■□□□ 1.07
SGCE-207ENST00000447873 H3BRB1 525 aa21.72■■□□□ 1.07
SGCE-207ENST00000447873 RPN1P04843 607 aaKnown RBP21.72■■□□□ 1.07
SGCE-207ENST00000447873 SARSP49591 514 aaKnown RBP21.72■■□□□ 1.07
SGCE-207ENST00000447873 NPEPPSP55786 919 aa21.72■■□□□ 1.07
SGCE-207ENST00000447873 IRX5P78411 483 aaPredicted RBP21.72■■□□□ 1.07
SGCE-207ENST00000447873 SLC9C1Q4G0N8 1177 aa21.72■■□□□ 1.07
SGCE-207ENST00000447873 NT5DC1Q5TFE4 455 aa21.72■■□□□ 1.07
SGCE-207ENST00000447873 CNNM4Q6P4Q7 775 aa21.72■■□□□ 1.07
SGCE-207ENST00000447873 ATP8B4Q8TF62 1192 aa21.72■■□□□ 1.07
SGCE-207ENST00000447873 RUSC1Q9BVN2 902 aa21.72■■□□□ 1.07
SGCE-207ENST00000447873 NIFKQ9BYG3 293 aaKnown RBP21.72■■□□□ 1.07
SGCE-207ENST00000447873 UPF3AQ9H1J1 476 aaKnown RBP21.72■■□□□ 1.07
SGCE-207ENST00000447873 TUT1Q9H6E5 874 aaKnown RBP21.72■■□□□ 1.07
SGCE-207ENST00000447873 CYP26B1Q9NR63 512 aa21.72■■□□□ 1.07
SGCE-207ENST00000447873 BIN1O00499 593 aa21.71■■□□□ 1.07
SGCE-207ENST00000447873 MSCO60682 206 aa21.71■■□□□ 1.07
SGCE-207ENST00000447873 PGK1P00558 417 aa21.71■■□□□ 1.07
SGCE-207ENST00000447873 IDEP14735 1019 aa21.71■■□□□ 1.07
SGCE-207ENST00000447873 RAD51AP2Q09MP3 1159 aa21.71■■□□□ 1.07
SGCE-207ENST00000447873 PLCB4Q15147 1175 aa21.71■■□□□ 1.07
SGCE-207ENST00000447873 MTERF2Q49AM1 385 aa21.71■■□□□ 1.07
SGCE-207ENST00000447873 GNASQ5JWF2 1037 aa21.71■■□□□ 1.07
SGCE-207ENST00000447873 C1orf186Q6ZWK4 172 aa21.71■■□□□ 1.07
SGCE-207ENST00000447873 CCDC47Q96A33 483 aaKnown RBP21.71■■□□□ 1.07
SGCE-207ENST00000447873 RMND1Q9NWS8 449 aa21.71■■□□□ 1.07
SGCE-207ENST00000447873 TRPC6Q9Y210 931 aa21.71■■□□□ 1.07
SGCE-207ENST00000447873 NPHP3-ACAD11A0A0J9YXS1 232 aa21.7■■□□□ 1.06
SGCE-207ENST00000447873 MYL3P08590 195 aa21.7■■□□□ 1.06
SGCE-207ENST00000447873 ZNF445P59923 1031 aa21.7■■□□□ 1.06
SGCE-207ENST00000447873 DNAJC19Q96DA6 116 aa21.7■■□□□ 1.06
SGCE-207ENST00000447873 ZEB2O60315 1214 aa21.7■■□□□ 1.06
SGCE-207ENST00000447873 HBP1O60381 514 aa21.7■■□□□ 1.06
SGCE-207ENST00000447873 USO1O60763 962 aaKnown RBP21.7■■□□□ 1.06
SGCE-207ENST00000447873 CCDC192P0DO97 292 aa21.7■■□□□ 1.06
SGCE-207ENST00000447873 CACNB1Q02641 598 aaPredicted RBP21.7■■□□□ 1.06
SGCE-207ENST00000447873 GIT2Q14161 759 aa21.7■■□□□ 1.06
SGCE-207ENST00000447873 ISM2Q6H9L7 571 aa21.7■■□□□ 1.06
SGCE-207ENST00000447873 UNC13DQ70J99 1090 aa21.7■■□□□ 1.06
SGCE-207ENST00000447873 REEP2Q9BRK0 252 aa21.7■■□□□ 1.06
SGCE-207ENST00000447873 RNPEPQ9H4A4 650 aa21.7■■□□□ 1.06
SGCE-207ENST00000447873 MAN1B1Q9UKM7 699 aa21.7■■□□□ 1.06
SGCE-207ENST00000447873 PVALEFA0A1B0GWK0 134 aa21.69■■□□□ 1.06
SGCE-207ENST00000447873 MYADML2A6NDP7 307 aa21.69■■□□□ 1.06
SGCE-207ENST00000447873 KLRC4O43908 158 aa21.69■■□□□ 1.06
SGCE-207ENST00000447873 KPNA6O60684 536 aa21.69■■□□□ 1.06
SGCE-207ENST00000447873 ADAMTS4O75173 837 aa21.69■■□□□ 1.06
SGCE-207ENST00000447873 DGAT1O75907 488 aa21.69■■□□□ 1.06
SGCE-207ENST00000447873 MYCNP04198 464 aaPredicted RBP21.69■■□□□ 1.06
SGCE-207ENST00000447873 GUCY2CP25092 1073 aa21.69■■□□□ 1.06
SGCE-207ENST00000447873 NKX3-2P78367 333 aa21.69■■□□□ 1.06
SGCE-207ENST00000447873 TYRO3Q06418 890 aa21.69■■□□□ 1.06
SGCE-207ENST00000447873 KMT5BQ4FZB7 885 aa21.69■■□□□ 1.06
SGCE-207ENST00000447873 LRSAM1Q6UWE0 723 aa21.69■■□□□ 1.06
SGCE-207ENST00000447873 TBCAO75347 108 aaKnown RBP21.68■■□□□ 1.06
SGCE-207ENST00000447873 F2P00734 622 aa21.68■■□□□ 1.06
SGCE-207ENST00000447873 KCNB1Q14721 858 aa21.68■■□□□ 1.06
SGCE-207ENST00000447873 CCDC65Q8IXS2 484 aa21.68■■□□□ 1.06
SGCE-207ENST00000447873 TRIML1Q8N9V2 468 aa21.68■■□□□ 1.06
SGCE-207ENST00000447873 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.68■■□□□ 1.06
SGCE-207ENST00000447873 ZHX3Q9H4I2 956 aa21.68■■□□□ 1.06
SGCE-207ENST00000447873 EXOC1Q9NV70 894 aa21.68■■□□□ 1.06
SGCE-207ENST00000447873 PANK4Q9NVE7 773 aa21.68■■□□□ 1.06
SGCE-207ENST00000447873 PPME1Q9Y570 386 aa21.68■■□□□ 1.06
SGCE-207ENST00000447873 MYH11P35749 1972 aa21.68■■□□□ 1.06
SGCE-207ENST00000447873 KAT6AQ92794 2004 aa21.67■■□□□ 1.06
SGCE-207ENST00000447873 POLGP54098 1239 aaPredicted RBP21.67■■□□□ 1.06
SGCE-207ENST00000447873 TARBP2Q15633 366 aaKnown RBP21.67■■□□□ 1.06
SGCE-207ENST00000447873 PKN2Q16513 984 aaKnown RBP21.67■■□□□ 1.06
SGCE-207ENST00000447873 STX1AQ16623 288 aa21.67■■□□□ 1.06
SGCE-207ENST00000447873 FBXO46Q6PJ61 603 aaPredicted RBP21.67■■□□□ 1.06
SGCE-207ENST00000447873 FUCA2Q9BTY2 467 aa21.67■■□□□ 1.06
SGCE-207ENST00000447873 TIPINQ9BVW5 301 aa21.67■■□□□ 1.06
SGCE-207ENST00000447873 ATP6V0A4Q9HBG4 840 aa21.67■■□□□ 1.06
SGCE-207ENST00000447873 NLRP12P59046 1061 aa21.66■■□□□ 1.06
SGCE-207ENST00000447873 CHMP4BP1P59074 171 aa21.66■■□□□ 1.06
SGCE-207ENST00000447873 PURAQ00577 322 aaKnown RBP21.66■■□□□ 1.06
SGCE-207ENST00000447873 MORC3Q14149 939 aa21.66■■□□□ 1.06
SGCE-207ENST00000447873 MAEAQ7L5Y9 396 aa21.66■■□□□ 1.06
SGCE-207ENST00000447873 RNF180Q86T96 592 aa21.66■■□□□ 1.06
SGCE-207ENST00000447873 SLC7A3Q8WY07 619 aa21.66■■□□□ 1.06
SGCE-207ENST00000447873 KAT2BQ92831 832 aa21.66■■□□□ 1.06
SGCE-207ENST00000447873 KATNAL1Q9BW62 490 aa21.66■■□□□ 1.06
SGCE-207ENST00000447873 UNC93B1Q9H1C4 597 aa21.66■■□□□ 1.06
SGCE-207ENST00000447873 POLD4Q9HCU8 107 aa21.66■■□□□ 1.06
SGCE-207ENST00000447873 ODF2LQ9ULJ1 636 aa21.66■■□□□ 1.06
SGCE-207ENST00000447873 FRMPD3Q5JV73 1810 aa21.66■■□□□ 1.06
SGCE-207ENST00000447873 HIP1RO75146 1068 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 RHOBTB3O94955 611 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 FAM13AO94988 1023 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 MYCP01106 439 aaPredicted RBP21.65■■□□□ 1.06
SGCE-207ENST00000447873 INSRRP14616 1297 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms