RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 PCMTD1Q96MG8 357 aaPredicted RBP20.85■□□□□ 0.93
HMGA1-205ENST00000447654 NLRP3Q96P20 1036 aa20.85■□□□□ 0.93
HMGA1-205ENST00000447654 STMN4Q9H169 189 aaPredicted RBP20.85■□□□□ 0.93
HMGA1-205ENST00000447654 BLZF1Q9H2G9 400 aa20.85■□□□□ 0.93
HMGA1-205ENST00000447654 INTS9Q9NV88 658 aaKnown RBP20.85■□□□□ 0.93
HMGA1-205ENST00000447654 SCOCQ9UIL1 159 aa20.85■□□□□ 0.93
HMGA1-205ENST00000447654 TAF1LQ8IZX4 1826 aa20.84■□□□□ 0.93
HMGA1-205ENST00000447654 CYP2D7A0A087X1C5 515 aa20.84■□□□□ 0.93
HMGA1-205ENST00000447654 BICDL2A1A5D9 508 aa20.84■□□□□ 0.93
HMGA1-205ENST00000447654 CCDC169A6NNP5 214 aa20.84■□□□□ 0.93
HMGA1-205ENST00000447654 GJB6O95452 261 aa20.84■□□□□ 0.93
HMGA1-205ENST00000447654 MYBPC3Q14896 1274 aa20.84■□□□□ 0.93
HMGA1-205ENST00000447654 TRADDQ15628 312 aa20.84■□□□□ 0.93
HMGA1-205ENST00000447654 ASTE1Q2TB18 679 aaPredicted RBP20.84■□□□□ 0.93
HMGA1-205ENST00000447654 C2CD5Q86YS7 1000 aa20.84■□□□□ 0.93
HMGA1-205ENST00000447654 MDM1Q8TC05 714 aa20.84■□□□□ 0.93
HMGA1-205ENST00000447654 ACTRT1Q8TDG2 376 aa20.84■□□□□ 0.93
HMGA1-205ENST00000447654 RBM17Q96I25 401 aaKnown RBP20.84■□□□□ 0.93
HMGA1-205ENST00000447654 MMADHCQ9H3L0 296 aaPredicted RBP20.84■□□□□ 0.93
HMGA1-205ENST00000447654 LRRC4BQ9NT99 713 aa20.84■□□□□ 0.93
HMGA1-205ENST00000447654 SALL4Q9UJQ4 1053 aa20.84■□□□□ 0.93
HMGA1-205ENST00000447654 XBP1P17861 261 aa20.83■□□□□ 0.93
HMGA1-205ENST00000447654 STAG2Q8N3U4 1231 aa20.83■□□□□ 0.93
HMGA1-205ENST00000447654 GJD4Q96KN9 370 aaPredicted RBP20.83■□□□□ 0.93
HMGA1-205ENST00000447654 SLITRK6Q9H5Y7 841 aa20.83■□□□□ 0.93
HMGA1-205ENST00000447654 CYP39A1Q9NYL5 469 aa20.83■□□□□ 0.93
HMGA1-205ENST00000447654 JAG2Q9Y219 1238 aa20.83■□□□□ 0.93
HMGA1-205ENST00000447654 TNRC6CQ9HCJ0 1690 aaKnown RBP20.83■□□□□ 0.92
HMGA1-205ENST00000447654 AGTP01019 485 aa20.83■□□□□ 0.92
HMGA1-205ENST00000447654 TUBP50607 506 aa20.83■□□□□ 0.92
HMGA1-205ENST00000447654 NAB2Q15742 525 aa20.83■□□□□ 0.92
HMGA1-205ENST00000447654 CAVIN4Q5BKX8 364 aa20.83■□□□□ 0.92
HMGA1-205ENST00000447654 MEX3CQ5U5Q3 659 aaKnown RBP20.83■□□□□ 0.92
HMGA1-205ENST00000447654 ASAP3Q8TDY4 903 aa20.83■□□□□ 0.92
HMGA1-205ENST00000447654 MTA3Q9BTC8 594 aa20.83■□□□□ 0.92
HMGA1-205ENST00000447654 TIPINQ9BVW5 301 aa20.83■□□□□ 0.92
HMGA1-205ENST00000447654 PNMA2Q9UL42 364 aa20.83■□□□□ 0.92
HMGA1-205ENST00000447654 GDAQ9Y2T3 454 aa20.83■□□□□ 0.92
HMGA1-205ENST00000447654 BAZ2AQ9UIF9 1905 aaKnown RBP20.82■□□□□ 0.92
HMGA1-205ENST00000447654 MAGEB6P1A0A0J9YX57 407 aa20.82■□□□□ 0.92
HMGA1-205ENST00000447654 RGL2O15211 777 aa20.82■□□□□ 0.92
HMGA1-205ENST00000447654 LMNAP02545 664 aaKnown RBP20.82■□□□□ 0.92
HMGA1-205ENST00000447654 PLEKP08567 350 aaPredicted RBP20.82■□□□□ 0.92
HMGA1-205ENST00000447654 GNAT2P19087 354 aa20.82■□□□□ 0.92
HMGA1-205ENST00000447654 ATP2C1P98194 919 aaPredicted RBP20.82■□□□□ 0.92
HMGA1-205ENST00000447654 USP4Q13107 963 aa20.82■□□□□ 0.92
HMGA1-205ENST00000447654 CCDC84Q86UT8 332 aaPredicted RBP20.82■□□□□ 0.92
HMGA1-205ENST00000447654 COL23A1Q86Y22 540 aaPredicted RBP20.82■□□□□ 0.92
HMGA1-205ENST00000447654 NCSTNQ92542 709 aa20.82■□□□□ 0.92
HMGA1-205ENST00000447654 TAF4BQ92750 862 aa20.82■□□□□ 0.92
HMGA1-205ENST00000447654 FAM136AQ96C01 138 aa20.82■□□□□ 0.92
HMGA1-205ENST00000447654 RPS6KC1Q96S38 1066 aa20.82■□□□□ 0.92
HMGA1-205ENST00000447654 TXLNGYQ9BZA5 131 aa20.82■□□□□ 0.92
HMGA1-205ENST00000447654 NYXQ9GZU5 481 aa20.82■□□□□ 0.92
HMGA1-205ENST00000447654 ADAM7Q9H2U9 754 aa20.82■□□□□ 0.92
HMGA1-205ENST00000447654 ATP8A2Q9NTI2 1148 aa20.82■□□□□ 0.92
HMGA1-205ENST00000447654 ARL2BPQ9Y2Y0 163 aa20.82■□□□□ 0.92
HMGA1-205ENST00000447654 MINDY4BA8MYZ0 360 aa20.82■□□□□ 0.92
HMGA1-205ENST00000447654 POLE2P56282 527 aa20.82■□□□□ 0.92
HMGA1-205ENST00000447654 CMTR1Q8N1G2 835 aaKnown RBP20.82■□□□□ 0.92
HMGA1-205ENST00000447654 TBC1D16Q8TBP0 767 aa20.82■□□□□ 0.92
HMGA1-205ENST00000447654 DNAJC9Q8WXX5 260 aa20.82■□□□□ 0.92
HMGA1-205ENST00000447654 MTRQ99707 1265 aa20.82■□□□□ 0.92
HMGA1-205ENST00000447654 NACAP1Q9BZK3 213 aa20.82■□□□□ 0.92
HMGA1-205ENST00000447654 LRCH1Q9Y2L9 728 aa20.82■□□□□ 0.92
HMGA1-205ENST00000447654 LY75O60449 1722 aa20.81■□□□□ 0.92
HMGA1-205ENST00000447654 MROH7Q68CQ1 1323 aa20.81■□□□□ 0.92
HMGA1-205ENST00000447654 SBF2Q86WG5 1849 aa20.81■□□□□ 0.92
HMGA1-205ENST00000447654 A0A1B0GVG6 124 aa20.81■□□□□ 0.92
HMGA1-205ENST00000447654 TRIM49BA6NDI0 452 aa20.81■□□□□ 0.92
HMGA1-205ENST00000447654 A8MUI8 341 aa20.81■□□□□ 0.92
HMGA1-205ENST00000447654 TPBGLP0DKB5 382 aa20.81■□□□□ 0.92
HMGA1-205ENST00000447654 GUCY1A2P33402 732 aa20.81■□□□□ 0.92
HMGA1-205ENST00000447654 TPTE2Q6XPS3 522 aa20.81■□□□□ 0.92
HMGA1-205ENST00000447654 AGGF1Q8N302 714 aaeCLIP20.81■□□□□ 0.92
HMGA1-205ENST00000447654 CRACR2BQ8N4Y2 399 aaPredicted RBP20.81■□□□□ 0.92
HMGA1-205ENST00000447654 RBBP8NLQ8NC74 664 aaPredicted RBP20.81■□□□□ 0.92
HMGA1-205ENST00000447654 UBE2OQ9C0C9 1292 aaKnown RBP20.81■□□□□ 0.92
HMGA1-205ENST00000447654 STK38LQ9Y2H1 464 aa20.81■□□□□ 0.92
HMGA1-205ENST00000447654 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.81■□□□□ 0.92
HMGA1-205ENST00000447654 PALMO75781 387 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 STAT6P42226 847 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 RAD23BP54727 409 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 WASHC2DQ5SRD0 308 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 FAM196AQ6ZSG2 479 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 KLHL7Q8IXQ5 586 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 PIGOQ8TEQ8 1089 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 AZIN2Q96A70 460 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 TMEM109Q9BVC6 243 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 NOC4LQ9BVI4 516 aaKnown RBP20.8■□□□□ 0.92
HMGA1-205ENST00000447654 TXLNGQ9NUQ3 528 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 DLGAP2Q9P1A6 1054 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 PDP2Q9P2J9 529 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 CIDEBQ9UHD4 219 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 ZNF232Q9UNY5 417 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 ABCB11O95342 1321 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 BTNL10A8MVZ5 291 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 RHOBTB3O94955 611 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 PPP2R5BQ15173 497 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 RTN1Q16799 776 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms