RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ZNF200P98182 395 aaPredicted RBP6.37□□□□□ -1.39
SDCBP-205ENST00000447267 CHRNDQ07001 517 aa6.37□□□□□ -1.39
SDCBP-205ENST00000447267 RPS26P11Q5JNZ5 115 aaPredicted RBP6.37□□□□□ -1.39
SDCBP-205ENST00000447267 DPP9Q86TI2 863 aa6.37□□□□□ -1.39
SDCBP-205ENST00000447267 PDZD3Q86UT5 571 aa6.37□□□□□ -1.39
SDCBP-205ENST00000447267 FAM126BQ8IXS8 530 aa6.37□□□□□ -1.39
SDCBP-205ENST00000447267 TTLL11Q8NHH1 800 aa6.37□□□□□ -1.39
SDCBP-205ENST00000447267 PLBD2Q8NHP8 589 aa6.37□□□□□ -1.39
SDCBP-205ENST00000447267 NUP133Q8WUM0 1156 aa6.37□□□□□ -1.39
SDCBP-205ENST00000447267 TEKT1Q969V4 418 aa6.37□□□□□ -1.39
SDCBP-205ENST00000447267 RPGRIP1Q96KN7 1286 aa6.37□□□□□ -1.39
SDCBP-205ENST00000447267 KRTAP9-9Q9BYP9 154 aa6.37□□□□□ -1.39
SDCBP-205ENST00000447267 KRTAP9-4Q9BYQ2 154 aa6.37□□□□□ -1.39
SDCBP-205ENST00000447267 ARAP2Q8WZ64 1704 aa6.36□□□□□ -1.39
SDCBP-205ENST00000447267 ARVCFO00192 962 aa6.36□□□□□ -1.39
SDCBP-205ENST00000447267 CD4P01730 458 aa6.36□□□□□ -1.39
SDCBP-205ENST00000447267 NCLP19338 710 aaKnown RBP6.36□□□□□ -1.39
SDCBP-205ENST00000447267 ASPAP45381 313 aa6.36□□□□□ -1.39
SDCBP-205ENST00000447267 ERVK-21P61565 698 aa6.36□□□□□ -1.39
SDCBP-205ENST00000447267 DSC3Q14574 896 aa6.36□□□□□ -1.39
SDCBP-205ENST00000447267 CBX2Q14781 532 aaPredicted RBP6.36□□□□□ -1.39
SDCBP-205ENST00000447267 MRPL38Q96DV4 380 aaKnown RBP6.36□□□□□ -1.39
SDCBP-205ENST00000447267 TGS1Q96RS0 853 aaKnown RBP6.36□□□□□ -1.39
SDCBP-205ENST00000447267 SLC9A7Q96T83 725 aa6.36□□□□□ -1.39
SDCBP-205ENST00000447267 C17orf80Q9BSJ5 609 aa6.36□□□□□ -1.39
SDCBP-205ENST00000447267 NOC4LQ9BVI4 516 aaKnown RBP6.36□□□□□ -1.39
SDCBP-205ENST00000447267 SMOC2Q9H3U7 446 aa6.36□□□□□ -1.39
SDCBP-205ENST00000447267 ZC3H7BQ9UGR2 993 aaKnown RBP6.36□□□□□ -1.39
SDCBP-205ENST00000447267 SPEGQ15772 3267 aa6.36□□□□□ -1.39
SDCBP-205ENST00000447267 WDR87Q6ZQQ6 2873 aa6.36□□□□□ -1.39
SDCBP-205ENST00000447267 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.35□□□□□ -1.39
SDCBP-205ENST00000447267 TLR3O15455 904 aaKnown RBP6.35□□□□□ -1.39
SDCBP-205ENST00000447267 LINC01565O15544 149 aa6.35□□□□□ -1.39
SDCBP-205ENST00000447267 CYP26A1O43174 497 aa6.35□□□□□ -1.39
SDCBP-205ENST00000447267 CTNND1O60716 968 aaKnown RBP6.35□□□□□ -1.39
SDCBP-205ENST00000447267 GLRX3O76003 335 aaKnown RBP6.35□□□□□ -1.39
SDCBP-205ENST00000447267 PMLP29590 882 aa6.35□□□□□ -1.39
SDCBP-205ENST00000447267 GTF2F1P35269 517 aaKnown RBP eCLIP6.35□□□□□ -1.39
SDCBP-205ENST00000447267 IGHMBP2P38935 993 aaKnown RBP6.35□□□□□ -1.39
SDCBP-205ENST00000447267 CTSWP56202 376 aa6.35□□□□□ -1.39
SDCBP-205ENST00000447267 CHAF1AQ13111 956 aaPredicted RBP6.35□□□□□ -1.39
SDCBP-205ENST00000447267 AP3B2Q13367 1082 aa6.35□□□□□ -1.39
SDCBP-205ENST00000447267 SMAD4Q13485 552 aaKnown RBP6.35□□□□□ -1.39
SDCBP-205ENST00000447267 GRB14Q14449 540 aa6.35□□□□□ -1.39
SDCBP-205ENST00000447267 PTPN21Q16825 1174 aa6.35□□□□□ -1.39
SDCBP-205ENST00000447267 N4BP2L1Q5TBK1 243 aaPredicted RBP6.35□□□□□ -1.39
SDCBP-205ENST00000447267 OLFML2BQ68BL8 750 aa6.35□□□□□ -1.39
SDCBP-205ENST00000447267 C15orf52Q6ZUT6 534 aaKnown RBP6.35□□□□□ -1.39
SDCBP-205ENST00000447267 PHOSPHO2Q8TCD6 241 aa6.35□□□□□ -1.39
SDCBP-205ENST00000447267 RIN2Q8WYP3 895 aaPredicted RBP6.35□□□□□ -1.39
SDCBP-205ENST00000447267 DMRTB1Q96MA1 342 aa6.35□□□□□ -1.39
SDCBP-205ENST00000447267 ZDHHC15Q96MV8 337 aa6.35□□□□□ -1.39
SDCBP-205ENST00000447267 TRPV6Q9H1D0 765 aa6.35□□□□□ -1.39
SDCBP-205ENST00000447267 SEMA4AQ9H3S1 761 aa6.35□□□□□ -1.39
SDCBP-205ENST00000447267 PANK3Q9H999 370 aa6.35□□□□□ -1.39
SDCBP-205ENST00000447267 DISC1Q9NRI5 854 aa6.35□□□□□ -1.39
SDCBP-205ENST00000447267 RAD18Q9NS91 495 aa6.35□□□□□ -1.39
SDCBP-205ENST00000447267 CRIM1Q9NZV1 1036 aa6.35□□□□□ -1.39
SDCBP-205ENST00000447267 ANKFY1Q9P2R3 1169 aa6.35□□□□□ -1.39
SDCBP-205ENST00000447267 SRPK3Q9UPE1 567 aa6.35□□□□□ -1.39
SDCBP-205ENST00000447267 GNEQ9Y223 722 aaKnown RBP6.35□□□□□ -1.39
SDCBP-205ENST00000447267 MROH7Q68CQ1 1323 aa6.34□□□□□ -1.39
SDCBP-205ENST00000447267 A0A0U1RQG5 324 aaPredicted RBP6.34□□□□□ -1.39
SDCBP-205ENST00000447267 LINC01553A4QN01 128 aa6.34□□□□□ -1.39
SDCBP-205ENST00000447267 PLIN1O60240 522 aa6.34□□□□□ -1.39
SDCBP-205ENST00000447267 PCCAP05165 728 aaPredicted RBP6.34□□□□□ -1.39
SDCBP-205ENST00000447267 HSP90B1P14625 803 aaKnown RBP6.34□□□□□ -1.39
SDCBP-205ENST00000447267 HOXA7P31268 230 aaPredicted RBP6.34□□□□□ -1.39
SDCBP-205ENST00000447267 ICAM3P32942 547 aa6.34□□□□□ -1.39
SDCBP-205ENST00000447267 GYG1P46976 350 aa6.34□□□□□ -1.39
SDCBP-205ENST00000447267 RBM25P49756 843 aaKnown RBP6.34□□□□□ -1.39
SDCBP-205ENST00000447267 CPSF6Q16630 551 aaKnown RBP eCLIP6.34□□□□□ -1.39
SDCBP-205ENST00000447267 CCSAPQ6IQ19 270 aaPredicted RBP6.34□□□□□ -1.39
SDCBP-205ENST00000447267 CDC42EP5Q6NZY7 148 aa6.34□□□□□ -1.39
SDCBP-205ENST00000447267 UNQ6494/PRO21346Q6UXR6 183 aa6.34□□□□□ -1.39
SDCBP-205ENST00000447267 CBLL1Q75N03 491 aa6.34□□□□□ -1.39
SDCBP-205ENST00000447267 SUMF1Q8NBK3 374 aa6.34□□□□□ -1.39
SDCBP-205ENST00000447267 KLHDC9Q8NEP7 349 aa6.34□□□□□ -1.39
SDCBP-205ENST00000447267 SPATA18Q8TC71 538 aa6.34□□□□□ -1.39
SDCBP-205ENST00000447267 CCER1Q8TC90 406 aaPredicted RBP6.34□□□□□ -1.39
SDCBP-205ENST00000447267 PNISRQ8TF01 805 aaKnown RBP6.34□□□□□ -1.39
SDCBP-205ENST00000447267 GLT1D1Q96MS3 346 aa6.34□□□□□ -1.39
SDCBP-205ENST00000447267 BBC3Q96PG8 261 aaPredicted RBP6.34□□□□□ -1.39
SDCBP-205ENST00000447267 BCO2Q9BYV7 579 aa6.34□□□□□ -1.39
SDCBP-205ENST00000447267 GOLGA2P5Q9HBQ8 144 aa6.34□□□□□ -1.39
SDCBP-205ENST00000447267 CD207Q9UJ71 328 aa6.34□□□□□ -1.39
SDCBP-205ENST00000447267 IVNS1ABPQ9Y6Y0 642 aa6.34□□□□□ -1.39
SDCBP-205ENST00000447267 ELP1O95163 1332 aa6.33□□□□□ -1.4
SDCBP-205ENST00000447267 BPTFQ12830 3046 aa6.33□□□□□ -1.4
SDCBP-205ENST00000447267 A0A1B0GUL7 405 aa6.33□□□□□ -1.4
SDCBP-205ENST00000447267 PRR5-ARHGAP8B1AHC4 643 aa6.33□□□□□ -1.4
SDCBP-205ENST00000447267 EIF4EBP3O60516 100 aaPredicted RBP6.33□□□□□ -1.4
SDCBP-205ENST00000447267 TBX10O75333 385 aa6.33□□□□□ -1.4
SDCBP-205ENST00000447267 NEFMP07197 916 aa6.33□□□□□ -1.4
SDCBP-205ENST00000447267 ASGR1P07306 291 aa6.33□□□□□ -1.4
SDCBP-205ENST00000447267 GSTP1P09211 210 aaKnown RBP6.33□□□□□ -1.4
SDCBP-205ENST00000447267 ADORA2AP29274 412 aa6.33□□□□□ -1.4
SDCBP-205ENST00000447267 ARHGAP8P85298 464 aa6.33□□□□□ -1.4
SDCBP-205ENST00000447267 HDLBPQ00341 1268 aaKnown RBP6.33□□□□□ -1.4
SDCBP-205ENST00000447267 CDK5R2Q13319 367 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms