RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 ZNF587Q96SQ5 575 aaPredicted RBP4□□□□□ -1.77
PMS1-215ENST00000447232 RTP3Q9BQQ7 232 aa4□□□□□ -1.77
PMS1-215ENST00000447232 AP5M1Q9H0R1 490 aa4□□□□□ -1.77
PMS1-215ENST00000447232 MFSD1Q9H3U5 465 aa4□□□□□ -1.77
PMS1-215ENST00000447232 BARX2Q9UMQ3 279 aaPredicted RBP4□□□□□ -1.77
PMS1-215ENST00000447232 MYH1P12882 1939 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 CNOT1A5YKK6 2376 aaKnown RBP3.99□□□□□ -1.77
PMS1-215ENST00000447232 LGR5O75473 907 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 ADORA1P30542 326 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 SHMT1P34896 483 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 SEC13P55735 322 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 RING1Q06587 406 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 SEPT2Q15019 361 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 TMEM63BQ5T3F8 832 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 C8orf86Q6ZUL3 223 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 LRRC8DQ7L1W4 858 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 SCG3Q8WXD2 468 aaKnown RBP3.99□□□□□ -1.77
PMS1-215ENST00000447232 DHX38Q92620 1227 aaKnown RBP3.99□□□□□ -1.77
PMS1-215ENST00000447232 DDX11Q96FC9 970 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 C11orf84Q9BUA3 381 aaPredicted RBP3.99□□□□□ -1.77
PMS1-215ENST00000447232 RBM19Q9Y4C8 960 aaKnown RBP3.99□□□□□ -1.77
PMS1-215ENST00000447232 RIPK3Q9Y572 518 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 SLC30A4O14863 429 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 WDR46O15213 610 aaKnown RBP3.99□□□□□ -1.77
PMS1-215ENST00000447232 ALBP02768 609 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 AMHP03971 560 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 SP9P0CG40 484 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 BMPR1AP36894 532 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 CALD1Q05682 793 aaKnown RBP3.99□□□□□ -1.77
PMS1-215ENST00000447232 MBTPS1Q14703 1052 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 TWISTNBQ3B726 338 aaPredicted RBP3.99□□□□□ -1.77
PMS1-215ENST00000447232 SOWAHCQ53LP3 525 aaPredicted RBP3.99□□□□□ -1.77
PMS1-215ENST00000447232 TAPT1Q6NXT6 567 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 C20orf204Q6ZNR8 217 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 NOL8Q76FK4 1167 aaKnown RBP3.99□□□□□ -1.77
PMS1-215ENST00000447232 BTLAQ7Z6A9 289 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 ADGRD2Q7Z7M1 963 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 SIAH1Q8IUQ4 282 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 FAM133AQ8N9E0 248 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 FLCNQ8NFG4 579 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 ATP8B4Q8TF62 1192 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 TOP1MTQ969P6 601 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 CABP5Q9NP86 173 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 FBXO28Q9NVF7 368 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 AATFQ9NY61 560 aaKnown RBP eCLIP3.99□□□□□ -1.77
PMS1-215ENST00000447232 SERPINB13Q9UIV8 391 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 PPP1R9AQ9ULJ8 1098 aa3.99□□□□□ -1.77
PMS1-215ENST00000447232 IGSF10Q6WRI0 2623 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 ITGB7P26010 798 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 CTNNB1P35222 781 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 ADH7P40394 386 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 PTK7Q13308 1070 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 DOC2BQ14184 412 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 TMEM132AQ24JP5 1023 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 CRTC2Q53ET0 693 aaPredicted RBP3.98□□□□□ -1.77
PMS1-215ENST00000447232 IQSEC1Q6DN90 963 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 MYOCDQ8IZQ8 938 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 SPICE1Q8N0Z3 855 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 CLP1Q92989 425 aaKnown RBP3.98□□□□□ -1.77
PMS1-215ENST00000447232 YME1L1Q96TA2 773 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 MTG1Q9BT17 334 aaPredicted RBP3.98□□□□□ -1.77
PMS1-215ENST00000447232 TEX13BQ9BXU2 312 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 S1PR5Q9H228 398 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 VCPKMTQ9H867 229 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 PDGFCQ9NRA1 345 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 SAP30BPQ9UHR5 308 aaKnown RBP3.98□□□□□ -1.77
PMS1-215ENST00000447232 NAV1Q8NEY1 1877 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 WDFY3Q8IZQ1 3526 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 SRRM3A6NNA2 597 aaPredicted RBP3.98□□□□□ -1.77
PMS1-215ENST00000447232 ATP2A1O14983 1001 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 BAG3O95817 575 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 C1QTNF9P0C862 333 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 CKBP12277 381 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 NID1P14543 1247 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 TRIM26Q12899 539 aaPredicted RBP3.98□□□□□ -1.77
PMS1-215ENST00000447232 FAM47CQ5HY64 1035 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 UNQ6494/PRO21346Q6UXR6 183 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 PRR23BQ6ZRT6 265 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 ADGRA1Q86SQ6 560 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 SESTD1Q86VW0 696 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 VN1R2Q8NFZ6 395 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 PPP1R13LQ8WUF5 828 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 RIN2Q8WYP3 895 aaPredicted RBP3.98□□□□□ -1.77
PMS1-215ENST00000447232 PPP2R3CQ969Q6 453 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 BORCS6Q96GS4 357 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 RC3H2Q9HBD1 1191 aaKnown RBP3.98□□□□□ -1.77
PMS1-215ENST00000447232 HMG20BQ9P0W2 317 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 NCDNQ9UBB6 729 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 TMX2Q9Y320 296 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 RWDD3Q9Y3V2 267 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 CACNA1IQ9P0X4 2223 aa3.98□□□□□ -1.77
PMS1-215ENST00000447232 USP9XQ93008 2570 aaPredicted RBP3.97□□□□□ -1.77
PMS1-215ENST00000447232 DMXL2Q8TDJ6 3036 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 SPDYE3A6NKU9 549 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 C2CD4DB7Z1M9 353 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 CIAO1O76071 339 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 DNAJB1P25685 340 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 GATA4P43694 442 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 NRIP1P48552 1158 aa3.97□□□□□ -1.77
PMS1-215ENST00000447232 CNTN2Q02246 1040 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms