RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 EYA4O95677 639 aa20.07■□□□□ 0.8
TRAPPC4-203ENST00000447216 PLA2G4BP0C869 781 aa20.07■□□□□ 0.8
TRAPPC4-203ENST00000447216 SMIM10L2AP0DMW4 78 aa20.07■□□□□ 0.8
TRAPPC4-203ENST00000447216 SMIM10L2BP0DMW5 78 aa20.07■□□□□ 0.8
TRAPPC4-203ENST00000447216 INSRRP14616 1297 aa20.07■□□□□ 0.8
TRAPPC4-203ENST00000447216 IGBP1P78318 339 aa20.07■□□□□ 0.8
TRAPPC4-203ENST00000447216 SNW1Q13573 536 aaKnown RBP20.07■□□□□ 0.8
TRAPPC4-203ENST00000447216 LONRF3Q496Y0 759 aa20.07■□□□□ 0.8
TRAPPC4-203ENST00000447216 IQUBQ8NA54 791 aa20.07■□□□□ 0.8
TRAPPC4-203ENST00000447216 GPT2Q8TD30 523 aa20.07■□□□□ 0.8
TRAPPC4-203ENST00000447216 BBXQ8WY36 941 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC4-203ENST00000447216 CEP170P1Q96L14 293 aa20.07■□□□□ 0.8
TRAPPC4-203ENST00000447216 BHMT2Q9H2M3 363 aa20.07■□□□□ 0.8
TRAPPC4-203ENST00000447216 ANKEF1Q9NU02 776 aa20.07■□□□□ 0.8
TRAPPC4-203ENST00000447216 STK17AQ9UEE5 414 aa20.07■□□□□ 0.8
TRAPPC4-203ENST00000447216 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC4-203ENST00000447216 ARHGEF35A5YM69 484 aa20.06■□□□□ 0.8
TRAPPC4-203ENST00000447216 ZBTB42B2RXF5 422 aa20.06■□□□□ 0.8
TRAPPC4-203ENST00000447216 ACTN4O43707 911 aaKnown RBP20.06■□□□□ 0.8
TRAPPC4-203ENST00000447216 CABYRO75952 493 aa20.06■□□□□ 0.8
TRAPPC4-203ENST00000447216 RARRES1P49788 294 aa20.06■□□□□ 0.8
TRAPPC4-203ENST00000447216 PPFIA1Q13136 1202 aa20.06■□□□□ 0.8
TRAPPC4-203ENST00000447216 DNAH12Q6ZR08 3092 aa20.06■□□□□ 0.8
TRAPPC4-203ENST00000447216 OTUD6AQ7L8S5 288 aa20.06■□□□□ 0.8
TRAPPC4-203ENST00000447216 GRAMD1CQ8IYS0 662 aa20.06■□□□□ 0.8
TRAPPC4-203ENST00000447216 LARP4BQ92615 738 aaKnown RBP20.06■□□□□ 0.8
TRAPPC4-203ENST00000447216 STAMQ92783 540 aa20.06■□□□□ 0.8
TRAPPC4-203ENST00000447216 ZBTB10Q96DT7 871 aa20.06■□□□□ 0.8
TRAPPC4-203ENST00000447216 GLT1D1Q96MS3 346 aa20.06■□□□□ 0.8
TRAPPC4-203ENST00000447216 CCDC43Q96MW1 224 aaKnown RBP20.06■□□□□ 0.8
TRAPPC4-203ENST00000447216 NIFKQ9BYG3 293 aaKnown RBP20.06■□□□□ 0.8
TRAPPC4-203ENST00000447216 BMP2KQ9NSY1 1161 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC4-203ENST00000447216 SETD4Q9NVD3 440 aa20.06■□□□□ 0.8
TRAPPC4-203ENST00000447216 HDAC6Q9UBN7 1215 aa20.06■□□□□ 0.8
TRAPPC4-203ENST00000447216 DBR1Q9UK59 544 aaKnown RBP20.06■□□□□ 0.8
TRAPPC4-203ENST00000447216 XRCC6P12956 609 aaKnown RBP eCLIP20.05■□□□□ 0.8
TRAPPC4-203ENST00000447216 EN2P19622 333 aaPredicted RBP20.05■□□□□ 0.8
TRAPPC4-203ENST00000447216 SLC12A3P55017 1021 aa20.05■□□□□ 0.8
TRAPPC4-203ENST00000447216 ITGA7Q13683 1181 aa20.05■□□□□ 0.8
TRAPPC4-203ENST00000447216 HIC1Q14526 733 aa20.05■□□□□ 0.8
TRAPPC4-203ENST00000447216 TARBP2Q15633 366 aaKnown RBP20.05■□□□□ 0.8
TRAPPC4-203ENST00000447216 NFKBIBQ15653 356 aa20.05■□□□□ 0.8
TRAPPC4-203ENST00000447216 GRIK4Q16099 956 aa20.05■□□□□ 0.8
TRAPPC4-203ENST00000447216 FAM47CQ5HY64 1035 aa20.05■□□□□ 0.8
TRAPPC4-203ENST00000447216 ABHD8Q96I13 439 aa20.05■□□□□ 0.8
TRAPPC4-203ENST00000447216 STARD7Q9NQZ5 370 aa20.05■□□□□ 0.8
TRAPPC4-203ENST00000447216 CYP26B1Q9NR63 512 aa20.05■□□□□ 0.8
TRAPPC4-203ENST00000447216 DACT1Q9NYF0 836 aa20.05■□□□□ 0.8
TRAPPC4-203ENST00000447216 USO1O60763 962 aaKnown RBP20.04■□□□□ 0.8
TRAPPC4-203ENST00000447216 SLFN14P0C7P3 912 aa20.04■□□□□ 0.8
TRAPPC4-203ENST00000447216 ZNF200P98182 395 aaPredicted RBP20.04■□□□□ 0.8
TRAPPC4-203ENST00000447216 ZNF484Q5JVG2 852 aa20.04■□□□□ 0.8
TRAPPC4-203ENST00000447216 KRBA2Q6ZNG9 492 aa20.04■□□□□ 0.8
TRAPPC4-203ENST00000447216 GPBP1Q86WP2 473 aa20.04■□□□□ 0.8
TRAPPC4-203ENST00000447216 CEP57L1Q8IYX8 460 aa20.04■□□□□ 0.8
TRAPPC4-203ENST00000447216 C7orf31Q8N865 590 aa20.04■□□□□ 0.8
TRAPPC4-203ENST00000447216 ANKLE1Q8NAG6 615 aa20.04■□□□□ 0.8
TRAPPC4-203ENST00000447216 LMBR1Q8WVP7 490 aa20.04■□□□□ 0.8
TRAPPC4-203ENST00000447216 CEP89Q96ST8 783 aa20.04■□□□□ 0.8
TRAPPC4-203ENST00000447216 PYM1Q9BRP8 204 aaKnown RBP20.04■□□□□ 0.8
TRAPPC4-203ENST00000447216 RUSC1Q9BVN2 902 aa20.04■□□□□ 0.8
TRAPPC4-203ENST00000447216 SENP6Q9GZR1 1112 aaPredicted RBP20.04■□□□□ 0.8
TRAPPC4-203ENST00000447216 A0A0U1RQG5 324 aaPredicted RBP20.03■□□□□ 0.8
TRAPPC4-203ENST00000447216 AFMP43652 599 aa20.03■□□□□ 0.8
TRAPPC4-203ENST00000447216 PADI6Q6TGC4 694 aa20.03■□□□□ 0.8
TRAPPC4-203ENST00000447216 SV2BQ7L1I2 683 aa20.03■□□□□ 0.8
TRAPPC4-203ENST00000447216 KCTD17Q8N5Z5 321 aa20.03■□□□□ 0.8
TRAPPC4-203ENST00000447216 SYT2Q8N9I0 419 aaPredicted RBP20.03■□□□□ 0.8
TRAPPC4-203ENST00000447216 CNNM3Q8NE01 707 aa20.03■□□□□ 0.8
TRAPPC4-203ENST00000447216 PAWRQ96IZ0 340 aaKnown RBP20.03■□□□□ 0.8
TRAPPC4-203ENST00000447216 MTRQ99707 1265 aa20.03■□□□□ 0.8
TRAPPC4-203ENST00000447216 CUEDC2Q9H467 287 aa20.03■□□□□ 0.8
TRAPPC4-203ENST00000447216 USP25Q9UHP3 1055 aa20.03■□□□□ 0.8
TRAPPC4-203ENST00000447216 COL1A2P08123 1366 aa20.03■□□□□ 0.8
TRAPPC4-203ENST00000447216 NPHP3-ACAD11A0A0J9YXS1 232 aa20.02■□□□□ 0.8
TRAPPC4-203ENST00000447216 C17orf102A2RUQ5 167 aa20.02■□□□□ 0.8
TRAPPC4-203ENST00000447216 KINO60870 393 aaKnown RBP20.02■□□□□ 0.8
TRAPPC4-203ENST00000447216 CASP1P29466 404 aa20.02■□□□□ 0.8
TRAPPC4-203ENST00000447216 RAD51AP2Q09MP3 1159 aa20.02■□□□□ 0.8
TRAPPC4-203ENST00000447216 MARCH8Q5T0T0 291 aa20.02■□□□□ 0.8
TRAPPC4-203ENST00000447216 GDF6Q6KF10 455 aaPredicted RBP20.02■□□□□ 0.8
TRAPPC4-203ENST00000447216 RINT1Q6NUQ1 792 aa20.02■□□□□ 0.8
TRAPPC4-203ENST00000447216 MAEAQ7L5Y9 396 aa20.02■□□□□ 0.8
TRAPPC4-203ENST00000447216 PAGE5Q96GU1 130 aa20.02■□□□□ 0.8
TRAPPC4-203ENST00000447216 POLD4Q9HCU8 107 aa20.02■□□□□ 0.8
TRAPPC4-203ENST00000447216 GTF2IRD1Q9UHL9 959 aa20.02■□□□□ 0.8
TRAPPC4-203ENST00000447216 ALPK3Q96L96 1907 aa20.02■□□□□ 0.79
TRAPPC4-203ENST00000447216 MYMKA6NI61 221 aa20.01■□□□□ 0.79
TRAPPC4-203ENST00000447216 RRN3P2A6NIE6 340 aa20.01■□□□□ 0.79
TRAPPC4-203ENST00000447216 C22orf31O95567 290 aa20.01■□□□□ 0.79
TRAPPC4-203ENST00000447216 COL6A1P12109 1028 aa20.01■□□□□ 0.79
TRAPPC4-203ENST00000447216 CYP11B2P19099 503 aa20.01■□□□□ 0.79
TRAPPC4-203ENST00000447216 KLRC1P26715 233 aa20.01■□□□□ 0.79
TRAPPC4-203ENST00000447216 ATN1P54259 1190 aaPredicted RBP20.01■□□□□ 0.79
TRAPPC4-203ENST00000447216 SOX10P56693 466 aa20.01■□□□□ 0.79
TRAPPC4-203ENST00000447216 TBC1D8BQ0IIM8 1120 aa20.01■□□□□ 0.79
TRAPPC4-203ENST00000447216 ARSHQ5FYA8 562 aa20.01■□□□□ 0.79
TRAPPC4-203ENST00000447216 NFRKBQ6P4R8 1299 aa20.01■□□□□ 0.79
TRAPPC4-203ENST00000447216 C1orf186Q6ZWK4 172 aa20.01■□□□□ 0.79
TRAPPC4-203ENST00000447216 C11orf49Q9H6J7 331 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms