RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 REEP2Q9BRK0 252 aa20.83■□□□□ 0.92
SDCBP-204ENST00000447182 POLD4Q9HCU8 107 aa20.83■□□□□ 0.92
SDCBP-204ENST00000447182 SLC12A6Q9UHW9 1150 aa20.83■□□□□ 0.92
SDCBP-204ENST00000447182 QSER1Q2KHR3 1735 aa20.82■□□□□ 0.92
SDCBP-204ENST00000447182 KRIT1O00522 736 aa20.82■□□□□ 0.92
SDCBP-204ENST00000447182 SPATA31C1P0DKV0 1188 aa20.82■□□□□ 0.92
SDCBP-204ENST00000447182 RPL13P26373 211 aaKnown RBP20.82■□□□□ 0.92
SDCBP-204ENST00000447182 CTNNA1P35221 906 aaKnown RBP20.82■□□□□ 0.92
SDCBP-204ENST00000447182 AGBL2Q5U5Z8 902 aa20.82■□□□□ 0.92
SDCBP-204ENST00000447182 FBXW10Q5XX13 1052 aa20.82■□□□□ 0.92
SDCBP-204ENST00000447182 KCNV1Q6PIU1 500 aa20.82■□□□□ 0.92
SDCBP-204ENST00000447182 AP1M1Q9BXS5 423 aa20.82■□□□□ 0.92
SDCBP-204ENST00000447182 YY1AP1Q9H869 796 aa20.82■□□□□ 0.92
SDCBP-204ENST00000447182 TTC7AQ9ULT0 858 aaPredicted RBP20.82■□□□□ 0.92
SDCBP-204ENST00000447182 CAPN7Q9Y6W3 813 aa20.82■□□□□ 0.92
SDCBP-204ENST00000447182 SEC24CP53992 1094 aa20.81■□□□□ 0.92
SDCBP-204ENST00000447182 PSMC6P62333 389 aa20.81■□□□□ 0.92
SDCBP-204ENST00000447182 Q4G0T1 1027 aa20.81■□□□□ 0.92
SDCBP-204ENST00000447182 NT5DC3Q86UY8 548 aa20.81■□□□□ 0.92
SDCBP-204ENST00000447182 SLC35C1Q96A29 364 aa20.81■□□□□ 0.92
SDCBP-204ENST00000447182 HES6Q96HZ4 224 aa20.81■□□□□ 0.92
SDCBP-204ENST00000447182 DDX47Q9H0S4 455 aaKnown RBP20.81■□□□□ 0.92
SDCBP-204ENST00000447182 NEUROG2Q9H2A3 272 aa20.81■□□□□ 0.92
SDCBP-204ENST00000447182 PCDHA1Q9Y5I3 950 aa20.81■□□□□ 0.92
SDCBP-204ENST00000447182 ASTN1O14525 1302 aa20.81■□□□□ 0.92
SDCBP-204ENST00000447182 MEIS2O14770 477 aa20.81■□□□□ 0.92
SDCBP-204ENST00000447182 NR3C1P04150 777 aa20.81■□□□□ 0.92
SDCBP-204ENST00000447182 HDLBPQ00341 1268 aaKnown RBP20.81■□□□□ 0.92
SDCBP-204ENST00000447182 C6orf89Q6UWU4 347 aa20.81■□□□□ 0.92
SDCBP-204ENST00000447182 DDX42Q86XP3 938 aaKnown RBP eCLIP20.81■□□□□ 0.92
SDCBP-204ENST00000447182 CCDC26Q8TAB7 109 aa20.81■□□□□ 0.92
SDCBP-204ENST00000447182 UIMC1Q96RL1 719 aa20.81■□□□□ 0.92
SDCBP-204ENST00000447182 LY75O60449 1722 aa20.8■□□□□ 0.92
SDCBP-204ENST00000447182 TMCO5BA8MYB1 307 aa20.8■□□□□ 0.92
SDCBP-204ENST00000447182 E7EVH7 732 aa20.8■□□□□ 0.92
SDCBP-204ENST00000447182 DDX3XO00571 662 aaKnown RBP eCLIP20.8■□□□□ 0.924e-16■□□□□ 11.2
SDCBP-204ENST00000447182 FERP16591 822 aa20.8■□□□□ 0.92
SDCBP-204ENST00000447182 GTF2IP78347 998 aa20.8■□□□□ 0.92
SDCBP-204ENST00000447182 ARHGAP4P98171 946 aa20.8■□□□□ 0.92
SDCBP-204ENST00000447182 PABPC4Q13310 644 aaKnown RBP eCLIP20.8■□□□□ 0.925e-7■■■□□ 16
SDCBP-204ENST00000447182 DCAF17Q5H9S7 520 aaPredicted RBP20.8■□□□□ 0.92
SDCBP-204ENST00000447182 LTBP1Q14766 1721 aa20.8■□□□□ 0.92
SDCBP-204ENST00000447182 MYO1FO00160 1098 aa20.8■□□□□ 0.92
SDCBP-204ENST00000447182 HPDP32754 393 aaPredicted RBP20.8■□□□□ 0.92
SDCBP-204ENST00000447182 DRP2Q13474 957 aa20.8■□□□□ 0.92
SDCBP-204ENST00000447182 CCDC17Q96LX7 622 aa20.8■□□□□ 0.92
SDCBP-204ENST00000447182 GCNT4Q9P109 453 aa20.8■□□□□ 0.92
SDCBP-204ENST00000447182 AJAP1Q9UKB5 411 aaPredicted RBP20.8■□□□□ 0.92
SDCBP-204ENST00000447182 PLCB4Q15147 1175 aa20.79■□□□□ 0.92
SDCBP-204ENST00000447182 SPDYCQ5MJ68 293 aa20.79■□□□□ 0.92
SDCBP-204ENST00000447182 TMC3Q7Z5M5 1100 aa20.79■□□□□ 0.92
SDCBP-204ENST00000447182 DNAAF5Q86Y56 855 aa20.79■□□□□ 0.92
SDCBP-204ENST00000447182 SLC30A5Q8TAD4 765 aa20.79■□□□□ 0.92
SDCBP-204ENST00000447182 BORCS6Q96GS4 357 aa20.79■□□□□ 0.92
SDCBP-204ENST00000447182 FAM114A2Q9NRY5 505 aa20.79■□□□□ 0.92
SDCBP-204ENST00000447182 AMACRQ9UHK6 382 aa20.79■□□□□ 0.92
SDCBP-204ENST00000447182 PAEPP09466 180 aa20.78■□□□□ 0.92
SDCBP-204ENST00000447182 ITGA4P13612 1032 aa20.78■□□□□ 0.92
SDCBP-204ENST00000447182 POU5F1Q01860 360 aaKnown RBP20.78■□□□□ 0.92
SDCBP-204ENST00000447182 PRR16Q569H4 304 aa20.78■□□□□ 0.92
SDCBP-204ENST00000447182 DAAM2Q86T65 1068 aa20.78■□□□□ 0.92
SDCBP-204ENST00000447182 KCTD17Q8N5Z5 321 aa20.78■□□□□ 0.92
SDCBP-204ENST00000447182 OR2W6PQ8NHA6 318 aa20.78■□□□□ 0.92
SDCBP-204ENST00000447182 OLIG1Q8TAK6 271 aa20.78■□□□□ 0.92
SDCBP-204ENST00000447182 DCAF4Q8WV16 495 aa20.78■□□□□ 0.92
SDCBP-204ENST00000447182 MKL1Q969V6 931 aa20.78■□□□□ 0.92
SDCBP-204ENST00000447182 LENG9Q96B70 501 aa20.78■□□□□ 0.92
SDCBP-204ENST00000447182 CYFIP2Q96F07 1278 aa20.78■□□□□ 0.92
SDCBP-204ENST00000447182 FAM20AQ96MK3 541 aa20.78■□□□□ 0.92
SDCBP-204ENST00000447182 DIS3Q9Y2L1 958 aaKnown RBP20.78■□□□□ 0.92
SDCBP-204ENST00000447182 NCANO14594 1321 aa20.78■□□□□ 0.92
SDCBP-204ENST00000447182 GMNCA6NCL1 334 aa20.78■□□□□ 0.92
SDCBP-204ENST00000447182 MPHOSPH10O00566 681 aaKnown RBP20.78■□□□□ 0.92
SDCBP-204ENST00000447182 DAPK3O43293 454 aa20.78■□□□□ 0.92
SDCBP-204ENST00000447182 TRAPPC3O43617 180 aa20.78■□□□□ 0.92
SDCBP-204ENST00000447182 CASP4P49662 377 aa20.78■□□□□ 0.92
SDCBP-204ENST00000447182 TCERG1LQ5VWI1 586 aa20.78■□□□□ 0.92
SDCBP-204ENST00000447182 CABS1Q96KC9 395 aa20.78■□□□□ 0.92
SDCBP-204ENST00000447182 OLFML3Q9NRN5 406 aa20.78■□□□□ 0.92
SDCBP-204ENST00000447182 USP40Q9NVE5 1235 aa20.78■□□□□ 0.92
SDCBP-204ENST00000447182 MEIS1O00470 390 aa20.77■□□□□ 0.92
SDCBP-204ENST00000447182 HLA-DOAP06340 250 aa20.77■□□□□ 0.92
SDCBP-204ENST00000447182 HOXA10P31260 410 aaPredicted RBP20.77■□□□□ 0.92
SDCBP-204ENST00000447182 FLT3P36888 993 aa20.77■□□□□ 0.92
SDCBP-204ENST00000447182 STAT1P42224 750 aa20.77■□□□□ 0.92
SDCBP-204ENST00000447182 VPS72Q15906 364 aa20.77■□□□□ 0.92
SDCBP-204ENST00000447182 NFIL3Q16649 462 aa20.77■□□□□ 0.92
SDCBP-204ENST00000447182 CENPHQ9H3R5 247 aa20.77■□□□□ 0.92
SDCBP-204ENST00000447182 VCPKMTQ9H867 229 aa20.77■□□□□ 0.92
SDCBP-204ENST00000447182 PPANQ9NQ55 473 aaKnown RBP20.77■□□□□ 0.92
SDCBP-204ENST00000447182 AMFRQ9UKV5 643 aa20.77■□□□□ 0.92
SDCBP-204ENST00000447182 LRRC37AA6NMS7 1700 aa20.77■□□□□ 0.92
SDCBP-204ENST00000447182 H0YHG0 523 aa20.77■□□□□ 0.91
SDCBP-204ENST00000447182 C6orf229H3BNL8 230 aa20.77■□□□□ 0.91
SDCBP-204ENST00000447182 GALCP54803 685 aa20.77■□□□□ 0.91
SDCBP-204ENST00000447182 PPP2R2AP63151 447 aa20.77■□□□□ 0.91
SDCBP-204ENST00000447182 ACTN3Q08043 901 aaPredicted RBP20.77■□□□□ 0.91
SDCBP-204ENST00000447182 U2AF1L4Q8WU68 220 aaKnown RBP20.77■□□□□ 0.91
SDCBP-204ENST00000447182 UBLCP1Q8WVY7 318 aaPredicted RBP20.77■□□□□ 0.91
SDCBP-204ENST00000447182 P2RX7Q99572 595 aaKnown RBP20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms