RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 CDHR5Q9HBB8 845 aa20.63■□□□□ 0.89
COL9A1-205ENST00000447041 MAFBQ9Y5Q3 323 aaPredicted RBP20.63■□□□□ 0.89
COL9A1-205ENST00000447041 CYP46A1Q9Y6A2 500 aa20.63■□□□□ 0.89
COL9A1-205ENST00000447041 EVPLQ92817 2033 aa20.63■□□□□ 0.89
COL9A1-205ENST00000447041 BRWD1Q9NSI6 2320 aa20.62■□□□□ 0.89
COL9A1-205ENST00000447041 BMPR1AP36894 532 aa20.62■□□□□ 0.89
COL9A1-205ENST00000447041 NPAS4Q8IUM7 802 aa20.62■□□□□ 0.89
COL9A1-205ENST00000447041 BBXQ8WY36 941 aaPredicted RBP20.62■□□□□ 0.89
COL9A1-205ENST00000447041 NSUN3Q9H649 340 aaKnown RBP20.62■□□□□ 0.89
COL9A1-205ENST00000447041 GABBR1Q9UBS5 961 aa20.62■□□□□ 0.89
COL9A1-205ENST00000447041 TCEAL9Q9UHQ7 104 aa20.62■□□□□ 0.89
COL9A1-205ENST00000447041 RWDD3Q9Y3V2 267 aa20.62■□□□□ 0.89
COL9A1-205ENST00000447041 PCDHA10Q9Y5I2 948 aa20.62■□□□□ 0.89
COL9A1-205ENST00000447041 GRM6O15303 877 aa20.61■□□□□ 0.89
COL9A1-205ENST00000447041 MGEA5O60502 916 aa20.61■□□□□ 0.89
COL9A1-205ENST00000447041 CSPG5O95196 566 aa20.61■□□□□ 0.89
COL9A1-205ENST00000447041 RB1P06400 928 aa20.61■□□□□ 0.89
COL9A1-205ENST00000447041 PSAPP07602 524 aa20.61■□□□□ 0.89
COL9A1-205ENST00000447041 IBSPP21815 317 aaPredicted RBP20.61■□□□□ 0.89
COL9A1-205ENST00000447041 NLRP5P59047 1200 aa20.61■□□□□ 0.89
COL9A1-205ENST00000447041 NFX1Q12986 1120 aaKnown RBP20.61■□□□□ 0.89
COL9A1-205ENST00000447041 STK3Q13188 491 aa20.61■□□□□ 0.89
COL9A1-205ENST00000447041 LEXMQ3ZCV2 418 aa20.61■□□□□ 0.89
COL9A1-205ENST00000447041 PAN2Q504Q3 1202 aaKnown RBP20.61■□□□□ 0.89
COL9A1-205ENST00000447041 TRIM22Q8IYM9 498 aa20.61■□□□□ 0.89
COL9A1-205ENST00000447041 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.61■□□□□ 0.89
COL9A1-205ENST00000447041 C11orf84Q9BUA3 381 aaPredicted RBP20.61■□□□□ 0.89
COL9A1-205ENST00000447041 ERVK-5Q9HDB9 667 aa20.61■□□□□ 0.89
COL9A1-205ENST00000447041 SH3GLB2Q9NR46 395 aa20.61■□□□□ 0.89
COL9A1-205ENST00000447041 NOC2LQ9Y3T9 749 aaKnown RBP20.61■□□□□ 0.89
COL9A1-205ENST00000447041 SAMM50Q9Y512 469 aa20.61■□□□□ 0.89
COL9A1-205ENST00000447041 MRPL42Q9Y6G3 142 aaKnown RBP20.61■□□□□ 0.89
COL9A1-205ENST00000447041 MSH4O15457 936 aa20.6■□□□□ 0.89
COL9A1-205ENST00000447041 RPS6KA5O75582 802 aa20.6■□□□□ 0.89
COL9A1-205ENST00000447041 GATMP50440 423 aa20.6■□□□□ 0.89
COL9A1-205ENST00000447041 SSRP1Q08945 709 aaKnown RBP20.6■□□□□ 0.89
COL9A1-205ENST00000447041 GJA10Q969M2 543 aa20.6■□□□□ 0.89
COL9A1-205ENST00000447041 OSMRQ99650 979 aa20.6■□□□□ 0.89
COL9A1-205ENST00000447041 TM6SF1Q9BZW5 370 aa20.6■□□□□ 0.89
COL9A1-205ENST00000447041 BDP1A6H8Y1 2624 aa20.59■□□□□ 0.89
COL9A1-205ENST00000447041 WDR64B1ANS9 1081 aa20.59■□□□□ 0.89
COL9A1-205ENST00000447041 CHMP2AO43633 222 aa20.59■□□□□ 0.89
COL9A1-205ENST00000447041 VTNP04004 478 aa20.59■□□□□ 0.89
COL9A1-205ENST00000447041 IL9P15248 144 aa20.59■□□□□ 0.89
COL9A1-205ENST00000447041 CLCN3P51790 818 aa20.59■□□□□ 0.89
COL9A1-205ENST00000447041 KIZQ2M2Z5 673 aa20.59■□□□□ 0.89
COL9A1-205ENST00000447041 CMTR2Q8IYT2 770 aaKnown RBP20.59■□□□□ 0.89
COL9A1-205ENST00000447041 METTL13Q8N6R0 699 aa20.59■□□□□ 0.89
COL9A1-205ENST00000447041 TBCKQ8TEA7 893 aa20.59■□□□□ 0.89
COL9A1-205ENST00000447041 ZNF274Q96GC6 653 aaPredicted RBP20.59■□□□□ 0.89
COL9A1-205ENST00000447041 AIFM3Q96NN9 605 aa20.59■□□□□ 0.89
COL9A1-205ENST00000447041 PCDHA4Q9UN74 947 aa20.59■□□□□ 0.89
COL9A1-205ENST00000447041 H3BQ06 376 aaPredicted RBP20.58■□□□□ 0.89
COL9A1-205ENST00000447041 CPLX1O14810 134 aa20.58■□□□□ 0.89
COL9A1-205ENST00000447041 ZNF862O60290 1169 aa20.58■□□□□ 0.89
COL9A1-205ENST00000447041 DEXIO95424 95 aa20.58■□□□□ 0.89
COL9A1-205ENST00000447041 STAG3L1P0CL83 205 aa20.58■□□□□ 0.89
COL9A1-205ENST00000447041 USP11P51784 963 aa20.58■□□□□ 0.89
COL9A1-205ENST00000447041 UGCGQ16739 394 aa20.58■□□□□ 0.89
COL9A1-205ENST00000447041 NEK9Q8TD19 979 aa20.58■□□□□ 0.89
COL9A1-205ENST00000447041 SLC5A5Q92911 643 aa20.58■□□□□ 0.89
COL9A1-205ENST00000447041 PABPC5Q96DU9 382 aaKnown RBP20.58■□□□□ 0.89
COL9A1-205ENST00000447041 LMAN2LQ9H0V9 348 aa20.58■□□□□ 0.89
COL9A1-205ENST00000447041 ALG13Q9NP73 1137 aaKnown RBP20.58■□□□□ 0.89
COL9A1-205ENST00000447041 DISC1Q9NRI5 854 aa20.58■□□□□ 0.89
COL9A1-205ENST00000447041 LRFN2Q9ULH4 789 aa20.58■□□□□ 0.89
COL9A1-205ENST00000447041 ST3GAL5Q9UNP4 418 aa20.58■□□□□ 0.89
COL9A1-205ENST00000447041 CEP131Q9UPN4 1083 aa20.58■□□□□ 0.89
COL9A1-205ENST00000447041 NCOR1O75376 2440 aa20.57■□□□□ 0.88
COL9A1-205ENST00000447041 M0R2N6 131 aa20.57■□□□□ 0.88
COL9A1-205ENST00000447041 GAS7O60861 476 aa20.57■□□□□ 0.88
COL9A1-205ENST00000447041 GPR32O75388 356 aa20.57■□□□□ 0.88
COL9A1-205ENST00000447041 TDP2O95551 362 aa20.57■□□□□ 0.88
COL9A1-205ENST00000447041 MMP1P03956 469 aa20.57■□□□□ 0.88
COL9A1-205ENST00000447041 OATP04181 439 aa20.57■□□□□ 0.88
COL9A1-205ENST00000447041 COL9A1P20849 921 aa20.57■□□□□ 0.88
COL9A1-205ENST00000447041 SARSP49591 514 aaKnown RBP20.57■□□□□ 0.88
COL9A1-205ENST00000447041 PRKCEQ02156 737 aa20.57■□□□□ 0.88
COL9A1-205ENST00000447041 COL19A1Q14993 1142 aa20.57■□□□□ 0.88
COL9A1-205ENST00000447041 NPY5RQ15761 445 aa20.57■□□□□ 0.88
COL9A1-205ENST00000447041 FNDC1Q4ZHG4 1894 aaPredicted RBP20.57■□□□□ 0.88
COL9A1-205ENST00000447041 LRCH2Q5VUJ6 765 aa20.57■□□□□ 0.88
COL9A1-205ENST00000447041 PTCRAQ6ISU1 281 aaPredicted RBP20.57■□□□□ 0.88
COL9A1-205ENST00000447041 EP400NLQ6ZTU2 488 aa20.57■□□□□ 0.88
COL9A1-205ENST00000447041 FAM228AQ86W67 206 aa20.57■□□□□ 0.88
COL9A1-205ENST00000447041 KHSRPQ92945 711 aaKnown RBP eCLIP20.57■□□□□ 0.88
COL9A1-205ENST00000447041 FAM167AQ96KS9 214 aa20.57■□□□□ 0.88
COL9A1-205ENST00000447041 ADAM2Q99965 735 aa20.57■□□□□ 0.88
COL9A1-205ENST00000447041 PLVAPQ9BX97 442 aa20.57■□□□□ 0.88
COL9A1-205ENST00000447041 UNC45AQ9H3U1 944 aa20.57■□□□□ 0.88
COL9A1-205ENST00000447041 CD320Q9NPF0 282 aa20.57■□□□□ 0.88
COL9A1-205ENST00000447041 PDRG1Q9NUG6 133 aa20.57■□□□□ 0.88
COL9A1-205ENST00000447041 PLXNA4Q9HCM2 1894 aa20.56■□□□□ 0.88
COL9A1-205ENST00000447041 DENND3A2RUS2 1198 aa20.56■□□□□ 0.88
COL9A1-205ENST00000447041 NEFLP07196 543 aa20.56■□□□□ 0.88
COL9A1-205ENST00000447041 CRYBB1P53674 252 aaPredicted RBP20.56■□□□□ 0.88
COL9A1-205ENST00000447041 CAMK1Q14012 370 aa20.56■□□□□ 0.88
COL9A1-205ENST00000447041 BLIDQ8IZY5 108 aa20.56■□□□□ 0.88
COL9A1-205ENST00000447041 LRRC71Q8N4P6 559 aa20.56■□□□□ 0.88
COL9A1-205ENST00000447041 LINC01465Q8N7H1 131 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms