RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 TRPV2Q9Y5S1 764 aa20.97■□□□□ 0.95
CCDC188-202ENST00000444532 C22orf31O95567 290 aa20.96■□□□□ 0.95
CCDC188-202ENST00000444532 GHRP10912 638 aa20.96■□□□□ 0.95
CCDC188-202ENST00000444532 MYOGP15173 224 aa20.96■□□□□ 0.95
CCDC188-202ENST00000444532 DEFB103AP81534 67 aa20.96■□□□□ 0.95
CCDC188-202ENST00000444532 LPIN1Q14693 890 aa20.96■□□□□ 0.95
CCDC188-202ENST00000444532 UGCGQ16739 394 aa20.96■□□□□ 0.95
CCDC188-202ENST00000444532 FBXO47Q5MNV8 452 aa20.96■□□□□ 0.95
CCDC188-202ENST00000444532 KIAA0319LQ8IZA0 1049 aa20.96■□□□□ 0.95
CCDC188-202ENST00000444532 TMX3Q96JJ7 454 aa20.96■□□□□ 0.95
CCDC188-202ENST00000444532 CELF4Q9BZC1 486 aaKnown RBP20.96■□□□□ 0.95
CCDC188-202ENST00000444532 KIF3AQ9Y496 699 aa20.96■□□□□ 0.95
CCDC188-202ENST00000444532 KDM3AQ9Y4C1 1321 aa20.96■□□□□ 0.95
CCDC188-202ENST00000444532 TLL1O43897 1013 aa20.95■□□□□ 0.94
CCDC188-202ENST00000444532 AMHP03971 560 aa20.95■□□□□ 0.94
CCDC188-202ENST00000444532 GRIN2CQ14957 1233 aa20.95■□□□□ 0.94
CCDC188-202ENST00000444532 XKR3Q5GH77 459 aa20.95■□□□□ 0.94
CCDC188-202ENST00000444532 PPP2R2DQ66LE6 453 aa20.95■□□□□ 0.94
CCDC188-202ENST00000444532 TSHZ1Q6ZSZ6 1077 aa20.95■□□□□ 0.94
CCDC188-202ENST00000444532 ZBED2Q9BTP6 218 aa20.95■□□□□ 0.94
CCDC188-202ENST00000444532 NIFKQ9BYG3 293 aaKnown RBP20.95■□□□□ 0.94
CCDC188-202ENST00000444532 LOXHD1Q8IVV2 1947 aa20.94■□□□□ 0.94
CCDC188-202ENST00000444532 CHD9Q3L8U1 2897 aa20.94■□□□□ 0.94
CCDC188-202ENST00000444532 RBAK-RBAKDNI3L0D1 243 aa20.94■□□□□ 0.94
CCDC188-202ENST00000444532 EML1O00423 815 aa20.94■□□□□ 0.94
CCDC188-202ENST00000444532 DKC1O60832 514 aaKnown RBP eCLIP20.94■□□□□ 0.94
CCDC188-202ENST00000444532 GJB5O95377 273 aa20.94■□□□□ 0.94
CCDC188-202ENST00000444532 CD2BP2O95400 341 aaKnown RBP20.94■□□□□ 0.94
CCDC188-202ENST00000444532 PSMC5P62195 406 aa20.94■□□□□ 0.94
CCDC188-202ENST00000444532 TMEM62Q0P6H9 643 aa20.94■□□□□ 0.94
CCDC188-202ENST00000444532 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.94■□□□□ 0.94
CCDC188-202ENST00000444532 FAM43BQ6ZT52 329 aaPredicted RBP20.94■□□□□ 0.94
CCDC188-202ENST00000444532 METTL13Q8N6R0 699 aa20.94■□□□□ 0.94
CCDC188-202ENST00000444532 NEMFO60524 1076 aa20.93■□□□□ 0.94
CCDC188-202ENST00000444532 P4HBP07237 508 aaKnown RBP20.93■□□□□ 0.94
CCDC188-202ENST00000444532 CA3P07451 260 aa20.93■□□□□ 0.94
CCDC188-202ENST00000444532 TMOD1P28289 359 aa20.93■□□□□ 0.94
CCDC188-202ENST00000444532 QARSP47897 775 aaKnown RBP20.93■□□□□ 0.94
CCDC188-202ENST00000444532 GNL2Q13823 731 aaKnown RBP20.93■□□□□ 0.94
CCDC188-202ENST00000444532 EPHA7Q15375 998 aa20.93■□□□□ 0.94
CCDC188-202ENST00000444532 TARBP2Q15633 366 aaKnown RBP20.93■□□□□ 0.94
CCDC188-202ENST00000444532 CALCRLQ16602 461 aa20.93■□□□□ 0.94
CCDC188-202ENST00000444532 ZNF710Q8N1W2 664 aa20.93■□□□□ 0.94
CCDC188-202ENST00000444532 MYLIPQ8WY64 445 aa20.93■□□□□ 0.94
CCDC188-202ENST00000444532 RAD9AQ99638 391 aa20.93■□□□□ 0.94
CCDC188-202ENST00000444532 PCDHA12Q9UN75 941 aa20.93■□□□□ 0.94
CCDC188-202ENST00000444532 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.92■□□□□ 0.94
CCDC188-202ENST00000444532 STBD1O95210 358 aa20.92■□□□□ 0.94
CCDC188-202ENST00000444532 SPIRE1Q08AE8 756 aa20.92■□□□□ 0.94
CCDC188-202ENST00000444532 EFCAB12Q6NXP0 572 aa20.92■□□□□ 0.94
CCDC188-202ENST00000444532 TMCO2Q7Z6W1 182 aaPredicted RBP20.92■□□□□ 0.94
CCDC188-202ENST00000444532 NOSTRINQ8IVI9 506 aa20.92■□□□□ 0.94
CCDC188-202ENST00000444532 MYOCDQ8IZQ8 938 aa20.92■□□□□ 0.94
CCDC188-202ENST00000444532 BANK1Q8NDB2 785 aa20.92■□□□□ 0.94
CCDC188-202ENST00000444532 TOP1MTQ969P6 601 aa20.92■□□□□ 0.94
CCDC188-202ENST00000444532 AGO3Q9H9G7 860 aaKnown RBP20.92■□□□□ 0.94
CCDC188-202ENST00000444532 INSL6Q9Y581 213 aa20.92■□□□□ 0.94
CCDC188-202ENST00000444532 DDX11L8A8MPP1 907 aa20.91■□□□□ 0.94
CCDC188-202ENST00000444532 WNT7AO00755 349 aa20.91■□□□□ 0.94
CCDC188-202ENST00000444532 TBC1D8BQ0IIM8 1120 aa20.91■□□□□ 0.94
CCDC188-202ENST00000444532 ORC2Q13416 577 aaPredicted RBP20.91■□□□□ 0.94
CCDC188-202ENST00000444532 NCAPH2Q6IBW4 605 aa20.91■□□□□ 0.94
CCDC188-202ENST00000444532 LINC01465Q8N7H1 131 aa20.91■□□□□ 0.94
CCDC188-202ENST00000444532 MTMR9Q96QG7 549 aa20.91■□□□□ 0.94
CCDC188-202ENST00000444532 FTHL17Q9BXU8 183 aa20.91■□□□□ 0.94
CCDC188-202ENST00000444532 TTC12Q9H892 705 aaPredicted RBP20.91■□□□□ 0.94
CCDC188-202ENST00000444532 SEPT9Q9UHD8 586 aaPredicted RBP20.91■□□□□ 0.94
CCDC188-202ENST00000444532 FOSL2P15408 326 aa20.9■□□□□ 0.94
CCDC188-202ENST00000444532 ATP2B1P20020 1258 aa20.9■□□□□ 0.94
CCDC188-202ENST00000444532 U2AF2P26368 475 aaKnown RBP eCLIP20.9■□□□□ 0.94
CCDC188-202ENST00000444532 CD52P31358 61 aa20.9■□□□□ 0.94
CCDC188-202ENST00000444532 CLCN3P51790 818 aa20.9■□□□□ 0.94
CCDC188-202ENST00000444532 CRYBB1P53674 252 aaPredicted RBP20.9■□□□□ 0.94
CCDC188-202ENST00000444532 TAP1Q03518 808 aa20.9■□□□□ 0.94
CCDC188-202ENST00000444532 ODR4Q5SWX8 454 aa20.9■□□□□ 0.94
CCDC188-202ENST00000444532 MAP7D2Q96T17 732 aa20.9■□□□□ 0.94
CCDC188-202ENST00000444532 GAS2L1Q99501 681 aaPredicted RBP20.9■□□□□ 0.94
CCDC188-202ENST00000444532 PRDM12Q9H4Q4 367 aa20.9■□□□□ 0.94
CCDC188-202ENST00000444532 PADI3Q9ULW8 664 aa20.9■□□□□ 0.94
CCDC188-202ENST00000444532 GINS2Q9Y248 185 aa20.9■□□□□ 0.94
CCDC188-202ENST00000444532 ENPP3O14638 875 aa20.89■□□□□ 0.93
CCDC188-202ENST00000444532 GPR32O75388 356 aa20.89■□□□□ 0.93
CCDC188-202ENST00000444532 MCM7P33993 719 aa20.89■□□□□ 0.93
CCDC188-202ENST00000444532 TXKP42681 527 aa20.89■□□□□ 0.93
CCDC188-202ENST00000444532 TRAPPC10P48553 1259 aa20.89■□□□□ 0.93
CCDC188-202ENST00000444532 PAK2Q13177 524 aa20.89■□□□□ 0.93
CCDC188-202ENST00000444532 MTERF2Q49AM1 385 aa20.89■□□□□ 0.93
CCDC188-202ENST00000444532 FAM117BQ6P1L5 589 aa20.89■□□□□ 0.93
CCDC188-202ENST00000444532 ANO5Q75V66 913 aa20.89■□□□□ 0.93
CCDC188-202ENST00000444532 C4orf19Q8IY42 314 aa20.89■□□□□ 0.93
CCDC188-202ENST00000444532 CEP89Q96ST8 783 aa20.89■□□□□ 0.93
CCDC188-202ENST00000444532 SUGCTQ9HAC7 445 aa20.89■□□□□ 0.93
CCDC188-202ENST00000444532 CDHR5Q9HBB8 845 aa20.89■□□□□ 0.93
CCDC188-202ENST00000444532 AKT3Q9Y243 479 aa20.89■□□□□ 0.93
CCDC188-202ENST00000444532 PPME1Q9Y570 386 aa20.89■□□□□ 0.93
CCDC188-202ENST00000444532 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.89■□□□□ 0.93
CCDC188-202ENST00000444532 VTNP04004 478 aa20.88■□□□□ 0.93
CCDC188-202ENST00000444532 DNM2P50570 870 aa20.88■□□□□ 0.93
CCDC188-202ENST00000444532 HTRA4P83105 476 aaPredicted RBP20.88■□□□□ 0.93
CCDC188-202ENST00000444532 CDC42EP1Q00587 391 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms