RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 GJB4Q9NTQ9 266 aa22.66■■□□□ 1.22
LRCH3-208ENST00000443727 THEGQ9P2T0 379 aa22.66■■□□□ 1.22
LRCH3-208ENST00000443727 IGSF9BQ9UPX0 1349 aa22.65■■□□□ 1.22
LRCH3-208ENST00000443727 ZBTB42B2RXF5 422 aa22.65■■□□□ 1.22
LRCH3-208ENST00000443727 ENPP3O14638 875 aa22.65■■□□□ 1.22
LRCH3-208ENST00000443727 POU3F3P20264 500 aaPredicted RBP22.65■■□□□ 1.22
LRCH3-208ENST00000443727 KRT40Q6A162 431 aa22.65■■□□□ 1.22
LRCH3-208ENST00000443727 KIAA0319LQ8IZA0 1049 aa22.65■■□□□ 1.22
LRCH3-208ENST00000443727 FTHL17Q9BXU8 183 aa22.65■■□□□ 1.22
LRCH3-208ENST00000443727 BRMS1Q9HCU9 246 aa22.65■■□□□ 1.22
LRCH3-208ENST00000443727 CUL9Q8IWT3 2517 aa22.64■■□□□ 1.22
LRCH3-208ENST00000443727 PSMD10O75832 226 aa22.64■■□□□ 1.21
LRCH3-208ENST00000443727 LARGE1O95461 756 aa22.64■■□□□ 1.21
LRCH3-208ENST00000443727 C22orf31O95567 290 aa22.64■■□□□ 1.21
LRCH3-208ENST00000443727 OATP04181 439 aa22.64■■□□□ 1.21
LRCH3-208ENST00000443727 PRKCEQ02156 737 aa22.64■■□□□ 1.21
LRCH3-208ENST00000443727 PIK3AP1Q6ZUJ8 805 aa22.64■■□□□ 1.21
LRCH3-208ENST00000443727 NEK8Q86SG6 692 aa22.64■■□□□ 1.21
LRCH3-208ENST00000443727 FBXO22Q8NEZ5 403 aa22.64■■□□□ 1.21
LRCH3-208ENST00000443727 RDM1Q8NG50 284 aa22.64■■□□□ 1.21
LRCH3-208ENST00000443727 SP7Q8TDD2 431 aaPredicted RBP22.64■■□□□ 1.21
LRCH3-208ENST00000443727 C17orf80Q9BSJ5 609 aa22.64■■□□□ 1.21
LRCH3-208ENST00000443727 COL25A1Q9BXS0 654 aaPredicted RBP22.64■■□□□ 1.21
LRCH3-208ENST00000443727 SUGCTQ9HAC7 445 aa22.64■■□□□ 1.21
LRCH3-208ENST00000443727 PADI3Q9ULW8 664 aa22.64■■□□□ 1.21
LRCH3-208ENST00000443727 KDM3AQ9Y4C1 1321 aa22.63■■□□□ 1.21
LRCH3-208ENST00000443727 MAGEB2O15479 319 aa22.63■■□□□ 1.21
LRCH3-208ENST00000443727 MARCH6O60337 910 aa22.63■■□□□ 1.21
LRCH3-208ENST00000443727 NFX1Q12986 1120 aaKnown RBP22.63■■□□□ 1.21
LRCH3-208ENST00000443727 OXER1Q8TDS5 423 aa22.63■■□□□ 1.21
LRCH3-208ENST00000443727 MBOAT7Q96N66 472 aa22.63■■□□□ 1.21
LRCH3-208ENST00000443727 PPP1R16BQ96T49 567 aa22.63■■□□□ 1.21
LRCH3-208ENST00000443727 CCNT1O60563 726 aaKnown RBP22.62■■□□□ 1.21
LRCH3-208ENST00000443727 LPXNO60711 386 aa22.62■■□□□ 1.21
LRCH3-208ENST00000443727 RPS6KA5O75582 802 aa22.62■■□□□ 1.21
LRCH3-208ENST00000443727 GCFC2P16383 781 aaKnown RBP22.62■■□□□ 1.21
LRCH3-208ENST00000443727 TMOD1P28289 359 aa22.62■■□□□ 1.21
LRCH3-208ENST00000443727 KRT2P35908 639 aa22.62■■□□□ 1.21
LRCH3-208ENST00000443727 TRIM29Q14134 588 aa22.62■■□□□ 1.21
LRCH3-208ENST00000443727 KIZQ2M2Z5 673 aa22.62■■□□□ 1.21
LRCH3-208ENST00000443727 TMEM266Q2M3C6 531 aa22.62■■□□□ 1.21
LRCH3-208ENST00000443727 FIBCD1Q8N539 461 aa22.62■■□□□ 1.21
LRCH3-208ENST00000443727 ETNPPLQ8TBG4 499 aa22.62■■□□□ 1.21
LRCH3-208ENST00000443727 ATXN2LQ8WWM7 1075 aaKnown RBP22.62■■□□□ 1.21
LRCH3-208ENST00000443727 SYMPKQ92797 1274 aaKnown RBP22.62■■□□□ 1.21
LRCH3-208ENST00000443727 SAMD11Q96NU1 681 aa22.62■■□□□ 1.21
LRCH3-208ENST00000443727 MAP7D2Q96T17 732 aa22.62■■□□□ 1.21
LRCH3-208ENST00000443727 NAP1L4Q99733 375 aaKnown RBP22.62■■□□□ 1.21
LRCH3-208ENST00000443727 TRANK1O15050 2925 aa22.61■■□□□ 1.21
LRCH3-208ENST00000443727 SLC37A4O43826 429 aa22.61■■□□□ 1.21
LRCH3-208ENST00000443727 ZNF862O60290 1169 aa22.61■■□□□ 1.21
LRCH3-208ENST00000443727 VTNP04004 478 aa22.61■■□□□ 1.21
LRCH3-208ENST00000443727 FDPSP14324 419 aaKnown RBP22.61■■□□□ 1.21
LRCH3-208ENST00000443727 FOSBP53539 338 aa22.61■■□□□ 1.21
LRCH3-208ENST00000443727 UGCGQ16739 394 aa22.61■■□□□ 1.21
LRCH3-208ENST00000443727 TJAP1Q5JTD0 557 aa22.61■■□□□ 1.21
LRCH3-208ENST00000443727 ODR4Q5SWX8 454 aa22.61■■□□□ 1.21
LRCH3-208ENST00000443727 EFCAB12Q6NXP0 572 aa22.61■■□□□ 1.21
LRCH3-208ENST00000443727 NSUN7Q8NE18 718 aaKnown RBP22.61■■□□□ 1.21
LRCH3-208ENST00000443727 IL27Q8NEV9 243 aa22.61■■□□□ 1.21
LRCH3-208ENST00000443727 LMCD1Q9NZU5 365 aa22.61■■□□□ 1.21
LRCH3-208ENST00000443727 AKT3Q9Y243 479 aa22.61■■□□□ 1.21
LRCH3-208ENST00000443727 MYH9P35579 1960 aaKnown RBP22.61■■□□□ 1.21
LRCH3-208ENST00000443727 SIP14410 1827 aa22.61■■□□□ 1.21
LRCH3-208ENST00000443727 PRRC2BQ5JSZ5 2229 aaKnown RBP22.61■■□□□ 1.21
LRCH3-208ENST00000443727 JAK2O60674 1132 aa22.6■■□□□ 1.21
LRCH3-208ENST00000443727 IBSPP21815 317 aaPredicted RBP22.6■■□□□ 1.21
LRCH3-208ENST00000443727 CLCN3P51790 818 aa22.6■■□□□ 1.21
LRCH3-208ENST00000443727 MRPS5P82675 430 aaKnown RBP22.6■■□□□ 1.21
LRCH3-208ENST00000443727 EPC2Q52LR7 807 aa22.6■■□□□ 1.21
LRCH3-208ENST00000443727 PPP4R3AQ6IN85 833 aa22.6■■□□□ 1.21
LRCH3-208ENST00000443727 FAM20AQ96MK3 541 aa22.6■■□□□ 1.21
LRCH3-208ENST00000443727 CDHR5Q9HBB8 845 aa22.6■■□□□ 1.21
LRCH3-208ENST00000443727 SEPT9Q9UHD8 586 aaPredicted RBP22.6■■□□□ 1.21
LRCH3-208ENST00000443727 NOC2LQ9Y3T9 749 aaKnown RBP22.6■■□□□ 1.21
LRCH3-208ENST00000443727 GPR182O15218 404 aa22.59■■□□□ 1.21
LRCH3-208ENST00000443727 STAG3L1P0CL83 205 aa22.59■■□□□ 1.21
LRCH3-208ENST00000443727 CRYBB1P53674 252 aaPredicted RBP22.59■■□□□ 1.21
LRCH3-208ENST00000443727 TBC1D8BQ0IIM8 1120 aa22.59■■□□□ 1.21
LRCH3-208ENST00000443727 BTG3Q14201 252 aaPredicted RBP22.59■■□□□ 1.21
LRCH3-208ENST00000443727 XKR3Q5GH77 459 aa22.59■■□□□ 1.21
LRCH3-208ENST00000443727 TMEM192Q8IY95 271 aa22.59■■□□□ 1.21
LRCH3-208ENST00000443727 LRRC71Q8N4P6 559 aa22.59■■□□□ 1.21
LRCH3-208ENST00000443727 LINC01599Q8WXQ3 324 aa22.59■■□□□ 1.21
LRCH3-208ENST00000443727 SCLT1Q96NL6 688 aa22.59■■□□□ 1.21
LRCH3-208ENST00000443727 OSMRQ99650 979 aa22.59■■□□□ 1.21
LRCH3-208ENST00000443727 LRFN2Q9ULH4 789 aa22.59■■□□□ 1.21
LRCH3-208ENST00000443727 LIMCH1Q9UPQ0 1083 aa22.59■■□□□ 1.21
LRCH3-208ENST00000443727 ADGRA3Q8IWK6 1321 aa22.58■■□□□ 1.21
LRCH3-208ENST00000443727 DENND3A2RUS2 1198 aa22.58■■□□□ 1.21
LRCH3-208ENST00000443727 NR5A1Q13285 461 aa22.58■■□□□ 1.21
LRCH3-208ENST00000443727 PTPROQ16827 1216 aa22.58■■□□□ 1.21
LRCH3-208ENST00000443727 RTN4RL1Q86UN2 441 aaPredicted RBP22.58■■□□□ 1.21
LRCH3-208ENST00000443727 NPAS4Q8IUM7 802 aa22.58■■□□□ 1.21
LRCH3-208ENST00000443727 BANK1Q8NDB2 785 aa22.58■■□□□ 1.21
LRCH3-208ENST00000443727 ASB2Q96Q27 587 aa22.58■■□□□ 1.21
LRCH3-208ENST00000443727 ST3GAL5Q9UNP4 418 aa22.58■■□□□ 1.21
LRCH3-208ENST00000443727 DDX11L8A8MPP1 907 aa22.57■■□□□ 1.2
LRCH3-208ENST00000443727 BAG4O95429 457 aaKnown RBP22.57■■□□□ 1.2
LRCH3-208ENST00000443727 CTNNB1P35222 781 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms