RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 PSMC5P62195 406 aa14.43□□□□□ -0.1
PDLIM2-212ENST00000443561 ZNF484Q5JVG2 852 aa14.43□□□□□ -0.1
PDLIM2-212ENST00000443561 HABP4Q5JVS0 413 aaKnown RBP14.43□□□□□ -0.1
PDLIM2-212ENST00000443561 ZNF365Q70YC5 407 aa14.43□□□□□ -0.1
PDLIM2-212ENST00000443561 BRAPQ7Z569 592 aa14.43□□□□□ -0.1
PDLIM2-212ENST00000443561 KIAA0319LQ8IZA0 1049 aa14.43□□□□□ -0.1
PDLIM2-212ENST00000443561 CHAMP1Q96JM3 812 aa14.43□□□□□ -0.1
PDLIM2-212ENST00000443561 LBHD1Q9BQE6 289 aaPredicted RBP14.43□□□□□ -0.1
PDLIM2-212ENST00000443561 NIFKQ9BYG3 293 aaKnown RBP14.43□□□□□ -0.1
PDLIM2-212ENST00000443561 CDHR5Q9HBB8 845 aa14.43□□□□□ -0.1
PDLIM2-212ENST00000443561 PCDHA2Q9Y5H9 948 aa14.43□□□□□ -0.1
PDLIM2-212ENST00000443561 CLIC4Q9Y696 253 aa14.43□□□□□ -0.1
PDLIM2-212ENST00000443561 IGKV6-21A0A0C4DH24 114 aa14.42□□□□□ -0.1
PDLIM2-212ENST00000443561 SMIM35A0A1B0GVV1 85 aa14.42□□□□□ -0.1
PDLIM2-212ENST00000443561 LYPLA2O95372 231 aa14.42□□□□□ -0.1
PDLIM2-212ENST00000443561 BAG4O95429 457 aaKnown RBP14.42□□□□□ -0.1
PDLIM2-212ENST00000443561 P4HBP07237 508 aaKnown RBP14.42□□□□□ -0.1
PDLIM2-212ENST00000443561 PDCP20941 246 aa14.42□□□□□ -0.1
PDLIM2-212ENST00000443561 THPOP40225 353 aa14.42□□□□□ -0.1
PDLIM2-212ENST00000443561 QARSP47897 775 aaKnown RBP14.42□□□□□ -0.1
PDLIM2-212ENST00000443561 CLCN3P51790 818 aa14.42□□□□□ -0.1
PDLIM2-212ENST00000443561 PPIGQ13427 754 aaKnown RBP eCLIP14.42□□□□□ -0.11e-8■■■□□ 18.4
PDLIM2-212ENST00000443561 BFSP2Q13515 415 aa14.42□□□□□ -0.1
PDLIM2-212ENST00000443561 XKR3Q5GH77 459 aa14.42□□□□□ -0.1
PDLIM2-212ENST00000443561 DEFB128Q7Z7B8 93 aa14.42□□□□□ -0.1
PDLIM2-212ENST00000443561 CATSPER3Q86XQ3 398 aa14.42□□□□□ -0.1
PDLIM2-212ENST00000443561 C4orf19Q8IY42 314 aa14.42□□□□□ -0.1
PDLIM2-212ENST00000443561 CKAP2LQ8IYA6 745 aa14.42□□□□□ -0.1
PDLIM2-212ENST00000443561 TDHQ8IZJ6 230 aa14.42□□□□□ -0.1
PDLIM2-212ENST00000443561 TMEM199Q8N511 208 aa14.42□□□□□ -0.1
PDLIM2-212ENST00000443561 FAM49AQ9H0Q0 323 aaPredicted RBP14.42□□□□□ -0.1
PDLIM2-212ENST00000443561 SEPT9Q9UHD8 586 aaPredicted RBP14.42□□□□□ -0.1
PDLIM2-212ENST00000443561 TCEAL9Q9UHQ7 104 aa14.42□□□□□ -0.1
PDLIM2-212ENST00000443561 GNAT1P11488 350 aa14.41□□□□□ -0.1
PDLIM2-212ENST00000443561 CDC25AP30304 524 aa14.41□□□□□ -0.1
PDLIM2-212ENST00000443561 DDIT3P35638 169 aa14.41□□□□□ -0.1
PDLIM2-212ENST00000443561 PRPHP41219 470 aa14.41□□□□□ -0.1
PDLIM2-212ENST00000443561 TMEM62Q0P6H9 643 aa14.41□□□□□ -0.1
PDLIM2-212ENST00000443561 SF3A1Q15459 793 aaKnown RBP14.41□□□□□ -0.1
PDLIM2-212ENST00000443561 MTERF2Q49AM1 385 aa14.41□□□□□ -0.1
PDLIM2-212ENST00000443561 POTEGQ6S5H5 508 aa14.41□□□□□ -0.1
PDLIM2-212ENST00000443561 LRRC71Q8N4P6 559 aa14.41□□□□□ -0.1
PDLIM2-212ENST00000443561 TMEM40Q8WWA1 233 aa14.41□□□□□ -0.1
PDLIM2-212ENST00000443561 FAM167AQ96KS9 214 aa14.41□□□□□ -0.1
PDLIM2-212ENST00000443561 USP28Q96RU2 1077 aa14.41□□□□□ -0.1
PDLIM2-212ENST00000443561 AGO3Q9H9G7 860 aaKnown RBP14.41□□□□□ -0.1
PDLIM2-212ENST00000443561 XPNPEP1Q9NQW7 623 aa14.41□□□□□ -0.1
PDLIM2-212ENST00000443561 CDY2AQ9Y6F7 541 aa14.41□□□□□ -0.1
PDLIM2-212ENST00000443561 SZT2Q5T011 3432 aa14.4□□□□□ -0.1
PDLIM2-212ENST00000443561 A0A1W2PPC1 479 aa14.4□□□□□ -0.1
PDLIM2-212ENST00000443561 RSPH10B2B2RC85 870 aa14.4□□□□□ -0.1
PDLIM2-212ENST00000443561 CAND2O75155 1236 aa14.4□□□□□ -0.1
PDLIM2-212ENST00000443561 RSPH10BP0C881 870 aa14.4□□□□□ -0.1
PDLIM2-212ENST00000443561 MRPS6P82932 125 aaKnown RBP14.4□□□□□ -0.1
PDLIM2-212ENST00000443561 LPIN1Q14693 890 aa14.4□□□□□ -0.1
PDLIM2-212ENST00000443561 FOXD4L5Q5VV16 416 aaPredicted RBP14.4□□□□□ -0.1
PDLIM2-212ENST00000443561 TAF2Q6P1X5 1199 aa14.4□□□□□ -0.1
PDLIM2-212ENST00000443561 KCNK18Q7Z418 384 aa14.4□□□□□ -0.1
PDLIM2-212ENST00000443561 CCDC155Q8N6L0 562 aa14.4□□□□□ -0.1
PDLIM2-212ENST00000443561 FOXD4L4Q8WXT5 416 aaPredicted RBP14.4□□□□□ -0.1
PDLIM2-212ENST00000443561 HERVK_113Q902F9 699 aa14.4□□□□□ -0.1
PDLIM2-212ENST00000443561 CHD9Q3L8U1 2897 aa14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 DDX11L8A8MPP1 907 aa14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 MARCH6O60337 910 aa14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 GPR32O75388 356 aa14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 F13A1P00488 732 aa14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 VTNP04004 478 aa14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 YWHABP31946 246 aaKnown RBP14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 RFC2P35250 354 aa14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 FXR1P51114 621 aaKnown RBP eCLIP14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 PLEKHG4Q58EX7 1191 aa14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 FBXO47Q5MNV8 452 aa14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 OTOP2Q7RTS6 562 aa14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 TPH2Q8IWU9 490 aa14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 RETREG2Q8NC44 543 aa14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 PIGOQ8TEQ8 1089 aa14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 LINC01599Q8WXQ3 324 aa14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 LRCH3Q96II8 777 aa14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 ZNF668Q96K58 619 aaPredicted RBP14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 PNMA5Q96PV4 448 aa14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 PPP1R16BQ96T49 567 aa14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 POLR3CQ9BUI4 534 aaPredicted RBP14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 ADAMTS10Q9H324 1103 aa14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 DHX33Q9H6R0 707 aaKnown RBP14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 ZSWIM4Q9H7M6 989 aa14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 CYP26B1Q9NR63 512 aa14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 BMP2KQ9NSY1 1161 aaPredicted RBP14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 KDM3AQ9Y4C1 1321 aa14.39□□□□□ -0.11
PDLIM2-212ENST00000443561 TTC3P53804 2025 aa14.38□□□□□ -0.11
PDLIM2-212ENST00000443561 GRXCR1A8MXD5 290 aa14.38□□□□□ -0.11
PDLIM2-212ENST00000443561 LAD1O00515 517 aa14.38□□□□□ -0.11
PDLIM2-212ENST00000443561 MAFO75444 373 aaPredicted RBP14.38□□□□□ -0.11
PDLIM2-212ENST00000443561 BRD1O95696 1058 aa14.38□□□□□ -0.11
PDLIM2-212ENST00000443561 ZSCAN22P10073 491 aaPredicted RBP14.38□□□□□ -0.11
PDLIM2-212ENST00000443561 GHRP10912 638 aa14.38□□□□□ -0.11
PDLIM2-212ENST00000443561 RPA1P27694 616 aa14.38□□□□□ -0.11
PDLIM2-212ENST00000443561 RARRES1P49788 294 aa14.38□□□□□ -0.11
PDLIM2-212ENST00000443561 GRB10Q13322 594 aa14.38□□□□□ -0.11
PDLIM2-212ENST00000443561 LRIT3Q3SXY7 679 aa14.38□□□□□ -0.11
PDLIM2-212ENST00000443561 EFCAB12Q6NXP0 572 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms