RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 GH2P01242 217 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 PF4P02776 101 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 SPATA31C1P0DKV0 1188 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 SNHG28P0DPA3 235 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 EIF4A3P38919 411 aaKnown RBP8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 RACK1P63244 317 aaKnown RBP8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 LMNB2Q03252 620 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 RAD51AP2Q09MP3 1159 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 CAMK2GQ13555 558 aaPredicted RBP8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 GRM4Q14833 912 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 GRIK4Q16099 956 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 RASIP1Q5U651 963 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 ACAD11Q709F0 780 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 NOL8Q76FK4 1167 aaKnown RBP8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 ARMC9Q7Z3E5 817 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 CCDC83Q8IWF9 413 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 STK11IPQ8N1F8 1099 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 FAM184AQ8NB25 1140 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 SMARCC2Q8TAQ2 1214 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 SPON2Q9BUD6 331 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 WDR18Q9BV38 432 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 SPZ1Q9BXG8 430 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 ACBD3Q9H3P7 528 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 INCENPQ9NQS7 918 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 RAD18Q9NS91 495 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 CHMP5Q9NZZ3 219 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 PCDHB5Q9Y5E4 795 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 CSADQ9Y600 493 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 PARP14Q460N5 1801 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 LOC285556D6RIA3 1793 aa8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 BAZ2BQ9UIF8 2168 aaKnown RBP8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 SSC5DA1L4H1 1573 aa8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 C19orf81C9J6K1 198 aa8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 PLA2G6O60733 806 aa8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 DEXIO95424 95 aa8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 EEF2P13639 858 aaKnown RBP8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 DDIT3P35638 169 aa8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 SSRP1Q08945 709 aaKnown RBP8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 SEPT6Q14141 434 aa8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 RAB3GAP1Q15042 981 aa8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 NBPF12Q5TAG4 269 aaPredicted RBP8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 IGF2-ASQ6U949 168 aa8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 TMTC3Q6ZXV5 915 aa8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 PDZD3Q86UT5 571 aa8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 ANKRD13AQ8IZ07 590 aa8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 NSUN7Q8NE18 718 aaKnown RBP8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 CCDC12Q8WUD4 166 aaPredicted RBP8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 NUP133Q8WUM0 1156 aa8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 WRNIP1Q96S55 665 aa8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 RUSC1Q9BVN2 902 aa8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 NRSN2Q9GZP1 204 aa8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 KIAA1683Q9H0B3 1180 aa8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 MRPL18Q9H0U6 180 aaKnown RBP8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 CCDC86Q9H6F5 360 aaKnown RBP8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 CAPN10Q9HC96 672 aa8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 INPP5FQ9Y2H2 1132 aa8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 TMX2Q9Y320 296 aa8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 WDR33Q9C0J8 1336 aaKnown RBP8.2□□□□□ -1.1
R3HDM1-210ENST00000443537 PTPDC1A2A3K4 754 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 SMIM22K7EJ46 135 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 TM4SF5O14894 197 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 PRPF3O43395 683 aaKnown RBP8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 NMT2O60551 498 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 LARGE1O95461 756 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 PDHBP11177 359 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 GJB2P29033 226 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 SLC1A4P43007 532 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 ZNF543Q08ER8 600 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 ZNF252P-AS1Q0IIN9 211 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 STK3Q13188 491 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 GNL2Q13823 731 aaKnown RBP8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 TRIM29Q14134 588 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 SEPT2Q15019 361 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 GALNT17Q6IS24 598 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 SHISA2Q6UWI4 295 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 MIGA2Q7L4E1 593 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 GOLM1Q8NBJ4 401 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 ZNF296Q8WUU4 475 aaPredicted RBP8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 CDCA5Q96FF9 252 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 RHOVQ96L33 236 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 FEZ1Q99689 392 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 GLT8D2Q9H1C3 349 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 VCPKMTQ9H867 229 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 SH3GLB2Q9NR46 395 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 ORC3Q9UBD5 711 aaPredicted RBP8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 CLIP2Q9UDT6 1046 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 SEC63Q9UGP8 760 aaKnown RBP8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 ADAMTS1Q9UHI8 967 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 ASTN2O75129 1339 aaPredicted RBP8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 SRCAPQ6ZRS2 3230 aa8.19□□□□□ -1.1
R3HDM1-210ENST00000443537 RBBP6Q7Z6E9 1792 aaKnown RBP8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 WDR46O15213 610 aaKnown RBP8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 STX6O43752 255 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 WISP1O95388 367 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 GDF11O95390 407 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 CTSBP07858 339 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 LIG1P18858 919 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 GUCY1A2P33402 732 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 CCT2P78371 535 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms