RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 SH3RF3Q8TEJ3 882 aaPredicted RBP6.74□□□□□ -1.33
VPS50-206ENST00000443443 NEIL1Q96FI4 390 aaPredicted RBP6.74□□□□□ -1.33
VPS50-206ENST00000443443 SCYL1Q96KG9 808 aa6.74□□□□□ -1.33
VPS50-206ENST00000443443 CLUHP3Q96NS8 147 aa6.74□□□□□ -1.33
VPS50-206ENST00000443443 CDK5RAP1Q96SZ6 601 aaKnown RBP6.74□□□□□ -1.33
VPS50-206ENST00000443443 CHMP4AQ9BY43 222 aa6.74□□□□□ -1.33
VPS50-206ENST00000443443 SAMD15Q9P1V8 674 aa6.74□□□□□ -1.33
VPS50-206ENST00000443443 USP35Q9P2H5 1018 aa6.74□□□□□ -1.33
VPS50-206ENST00000443443 NR2E1Q9Y466 385 aa6.74□□□□□ -1.33
VPS50-206ENST00000443443 B3GALT1Q9Y5Z6 326 aa6.74□□□□□ -1.33
VPS50-206ENST00000443443 MPIG6BO95866 241 aa6.73□□□□□ -1.33
VPS50-206ENST00000443443 ETV4P43268 484 aa6.73□□□□□ -1.33
VPS50-206ENST00000443443 MEOX1P50221 254 aa6.73□□□□□ -1.33
VPS50-206ENST00000443443 ARHGAP44Q17R89 818 aa6.73□□□□□ -1.33
VPS50-206ENST00000443443 RNF151Q2KHN1 245 aa6.73□□□□□ -1.33
VPS50-206ENST00000443443 CCDC144BQ3MJ40 725 aa6.73□□□□□ -1.33
VPS50-206ENST00000443443 HS1BP3Q53T59 392 aa6.73□□□□□ -1.33
VPS50-206ENST00000443443 TCTN3Q6NUS6 607 aa6.73□□□□□ -1.33
VPS50-206ENST00000443443 RTKN2Q8IZC4 609 aa6.73□□□□□ -1.33
VPS50-206ENST00000443443 DNERQ8NFT8 737 aa6.73□□□□□ -1.33
VPS50-206ENST00000443443 CALML6Q8TD86 181 aa6.73□□□□□ -1.33
VPS50-206ENST00000443443 SH3TC2Q8TF17 1288 aa6.73□□□□□ -1.33
VPS50-206ENST00000443443 DLG3Q92796 817 aa6.73□□□□□ -1.33
VPS50-206ENST00000443443 BOCQ9BWV1 1114 aa6.73□□□□□ -1.33
VPS50-206ENST00000443443 KRTAP3-1Q9BYR8 98 aa6.73□□□□□ -1.33
VPS50-206ENST00000443443 OR10A5Q9H207 317 aa6.73□□□□□ -1.33
VPS50-206ENST00000443443 CD248Q9HCU0 757 aa6.73□□□□□ -1.33
VPS50-206ENST00000443443 FAM184BQ9ULE4 1060 aa6.73□□□□□ -1.33
VPS50-206ENST00000443443 ASB1Q9Y576 335 aa6.73□□□□□ -1.33
VPS50-206ENST00000443443 A0A0G2JNJ9 132 aa6.72□□□□□ -1.33
VPS50-206ENST00000443443 RASSF10A6NK89 507 aa6.72□□□□□ -1.33
VPS50-206ENST00000443443 PATE3B3GLJ2 98 aa6.72□□□□□ -1.33
VPS50-206ENST00000443443 GOLGA6L22H0YM25 854 aa6.72□□□□□ -1.33
VPS50-206ENST00000443443 PPP1R12AO14974 1030 aaPredicted RBP6.72□□□□□ -1.33
VPS50-206ENST00000443443 IGFALSP35858 605 aa6.72□□□□□ -1.33
VPS50-206ENST00000443443 SQSTM1Q13501 440 aa6.72□□□□□ -1.33
VPS50-206ENST00000443443 MOGSQ13724 837 aa6.72□□□□□ -1.33
VPS50-206ENST00000443443 STILQ15468 1287 aa6.72□□□□□ -1.33
VPS50-206ENST00000443443 FNDC3BQ53EP0 1204 aaKnown RBP6.72□□□□□ -1.33
VPS50-206ENST00000443443 LARP4Q71RC2 724 aaKnown RBP eCLIP6.72□□□□□ -1.33
VPS50-206ENST00000443443 SPRED1Q7Z699 444 aa6.72□□□□□ -1.33
VPS50-206ENST00000443443 FILIP1Q7Z7B0 1213 aa6.72□□□□□ -1.33
VPS50-206ENST00000443443 Q8TCH9 128 aa6.72□□□□□ -1.33
VPS50-206ENST00000443443 KIAA1683Q9H0B3 1180 aa6.72□□□□□ -1.33
VPS50-206ENST00000443443 KANSL2Q9H9L4 492 aa6.72□□□□□ -1.33
VPS50-206ENST00000443443 CABP5Q9NP86 173 aa6.72□□□□□ -1.33
VPS50-206ENST00000443443 Q9UFV3 132 aa6.72□□□□□ -1.33
VPS50-206ENST00000443443 ZFR2Q9UPR6 939 aaKnown RBP6.72□□□□□ -1.33
VPS50-206ENST00000443443 TNPO3Q9Y5L0 923 aaKnown RBP6.72□□□□□ -1.33
VPS50-206ENST00000443443 FOXS1O43638 330 aa6.71□□□□□ -1.34
VPS50-206ENST00000443443 CDC14BO60729 498 aa6.71□□□□□ -1.34
VPS50-206ENST00000443443 CR2P20023 1033 aa6.71□□□□□ -1.34
VPS50-206ENST00000443443 EIF4HQ15056 248 aaKnown RBP6.71□□□□□ -1.34
VPS50-206ENST00000443443 GRAMD4Q6IC98 578 aa6.71□□□□□ -1.34
VPS50-206ENST00000443443 ZCCHC8Q6NZY4 707 aaKnown RBP6.71□□□□□ -1.34
VPS50-206ENST00000443443 UBE2R2Q712K3 238 aaPredicted RBP6.71□□□□□ -1.34
VPS50-206ENST00000443443 UBXN4Q92575 508 aa6.71□□□□□ -1.34
VPS50-206ENST00000443443 DPYSL5Q9BPU6 564 aa6.71□□□□□ -1.34
VPS50-206ENST00000443443 TMPRSS5Q9H3S3 457 aa6.71□□□□□ -1.34
VPS50-206ENST00000443443 TSC22D4Q9Y3Q8 395 aa6.71□□□□□ -1.34
VPS50-206ENST00000443443 PTPDC1A2A3K4 754 aa6.7□□□□□ -1.34
VPS50-206ENST00000443443 C1QTNF3-AMACRE9PGA6 284 aa6.7□□□□□ -1.34
VPS50-206ENST00000443443 GLRX3O76003 335 aaKnown RBP6.7□□□□□ -1.34
VPS50-206ENST00000443443 ASMTLO95671 621 aa6.7□□□□□ -1.34
VPS50-206ENST00000443443 ASLP04424 464 aa6.7□□□□□ -1.34
VPS50-206ENST00000443443 ZBTB48P10074 688 aaPredicted RBP6.7□□□□□ -1.34
VPS50-206ENST00000443443 SDHAP31040 664 aa6.7□□□□□ -1.34
VPS50-206ENST00000443443 FLT3P36888 993 aa6.7□□□□□ -1.34
VPS50-206ENST00000443443 KIF11P52732 1056 aa6.7□□□□□ -1.34
VPS50-206ENST00000443443 PCOLCEQ15113 449 aa6.7□□□□□ -1.34
VPS50-206ENST00000443443 CATSPEREQ5SY80 951 aa6.7□□□□□ -1.34
VPS50-206ENST00000443443 USP30Q70CQ3 517 aa6.7□□□□□ -1.34
VPS50-206ENST00000443443 WWC2-AS2Q96NR7 200 aa6.7□□□□□ -1.34
VPS50-206ENST00000443443 PCIF1Q9H4Z3 704 aa6.7□□□□□ -1.34
VPS50-206ENST00000443443 PUF60Q9UHX1 559 aaKnown RBP6.7□□□□□ -1.34
VPS50-206ENST00000443443 MUSKO15146 869 aa6.69□□□□□ -1.34
VPS50-206ENST00000443443 ARHGAP6O43182 974 aa6.69□□□□□ -1.34
VPS50-206ENST00000443443 APEX1P27695 318 aaKnown RBP6.69□□□□□ -1.34
VPS50-206ENST00000443443 SELENOPP49908 381 aa6.69□□□□□ -1.34
VPS50-206ENST00000443443 MRE11P49959 708 aa6.69□□□□□ -1.34
VPS50-206ENST00000443443 STAT5BP51692 787 aa6.69□□□□□ -1.34
VPS50-206ENST00000443443 ZNF460Q14592 562 aa6.69□□□□□ -1.34
VPS50-206ENST00000443443 TBR1Q16650 682 aa6.69□□□□□ -1.34
VPS50-206ENST00000443443 PIK3R6Q5UE93 754 aa6.69□□□□□ -1.34
VPS50-206ENST00000443443 KANK2Q63ZY3 851 aa6.69□□□□□ -1.34
VPS50-206ENST00000443443 CC2D1AQ6P1N0 951 aaPredicted RBP6.69□□□□□ -1.34
VPS50-206ENST00000443443 CHST14Q8NCH0 376 aa6.69□□□□□ -1.34
VPS50-206ENST00000443443 ADOQ96SZ5 270 aa6.69□□□□□ -1.34
VPS50-206ENST00000443443 KRTAP17-1Q9BYP8 105 aa6.69□□□□□ -1.34
VPS50-206ENST00000443443 OAZ3Q9UMX2 235 aa6.69□□□□□ -1.34
VPS50-206ENST00000443443 MATN3O15232 486 aa6.68□□□□□ -1.34
VPS50-206ENST00000443443 DNAJC8O75937 253 aaPredicted RBP6.68□□□□□ -1.34
VPS50-206ENST00000443443 JMJD7P0C870 316 aa6.68□□□□□ -1.34
VPS50-206ENST00000443443 TNFRSF1AP19438 455 aa6.68□□□□□ -1.34
VPS50-206ENST00000443443 ZXDAP98168 799 aa6.68□□□□□ -1.34
VPS50-206ENST00000443443 MAP3K12Q12852 859 aa6.68□□□□□ -1.34
VPS50-206ENST00000443443 CDSNQ15517 529 aa6.68□□□□□ -1.34
VPS50-206ENST00000443443 ZNF174Q15697 407 aa6.68□□□□□ -1.34
VPS50-206ENST00000443443 CFAP100Q494V2 611 aa6.68□□□□□ -1.34
VPS50-206ENST00000443443 AGBL4Q5VU57 503 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms