RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 EPOPA6NHQ4 379 aa9.9□□□□□ -0.82
USP6NL-203ENST00000443016 ATG7O95352 703 aa9.9□□□□□ -0.82
USP6NL-203ENST00000443016 MRPS6P82932 125 aaKnown RBP9.9□□□□□ -0.82
USP6NL-203ENST00000443016 KRT76Q01546 638 aa9.9□□□□□ -0.82
USP6NL-203ENST00000443016 TJAP1Q5JTD0 557 aa9.9□□□□□ -0.82
USP6NL-203ENST00000443016 ABHD15Q6UXT9 468 aa9.9□□□□□ -0.82
USP6NL-203ENST00000443016 CCDC60Q8IWA6 550 aaPredicted RBP9.9□□□□□ -0.82
USP6NL-203ENST00000443016 TOP1MTQ969P6 601 aa9.9□□□□□ -0.82
USP6NL-203ENST00000443016 SNX21Q969T3 373 aa9.9□□□□□ -0.82
USP6NL-203ENST00000443016 PCDHA4Q9UN74 947 aa9.9□□□□□ -0.82
USP6NL-203ENST00000443016 MTCH2Q9Y6C9 303 aa9.9□□□□□ -0.82
USP6NL-203ENST00000443016 LINC01553A4QN01 128 aa9.9□□□□□ -0.83
USP6NL-203ENST00000443016 DHX15O43143 795 aaKnown RBP9.9□□□□□ -0.83
USP6NL-203ENST00000443016 HBP1O60381 514 aa9.9□□□□□ -0.83
USP6NL-203ENST00000443016 PSAPP07602 524 aa9.9□□□□□ -0.83
USP6NL-203ENST00000443016 XBP1P17861 261 aa9.9□□□□□ -0.83
USP6NL-203ENST00000443016 GRB10Q13322 594 aa9.9□□□□□ -0.83
USP6NL-203ENST00000443016 KRT40Q6A162 431 aa9.9□□□□□ -0.83
USP6NL-203ENST00000443016 ZNF746Q6NUN9 644 aaPredicted RBP9.9□□□□□ -0.83
USP6NL-203ENST00000443016 SMAP1Q8IYB5 467 aaPredicted RBP9.9□□□□□ -0.83
USP6NL-203ENST00000443016 TBCKQ8TEA7 893 aa9.9□□□□□ -0.83
USP6NL-203ENST00000443016 ATP8B4Q8TF62 1192 aa9.9□□□□□ -0.83
USP6NL-203ENST00000443016 GDPD5Q8WTR4 605 aa9.9□□□□□ -0.83
USP6NL-203ENST00000443016 ATXN2LQ8WWM7 1075 aaKnown RBP9.9□□□□□ -0.83
USP6NL-203ENST00000443016 PCDHA2Q9Y5H9 948 aa9.9□□□□□ -0.83
USP6NL-203ENST00000443016 PCDHA10Q9Y5I2 948 aa9.9□□□□□ -0.83
USP6NL-203ENST00000443016 KLRC1P26715 233 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 CIITAP33076 1130 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 USP11P51784 963 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 LPIN1Q14693 890 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 FBXO47Q5MNV8 452 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 MTHFD1LQ6UB35 978 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 ZNF662Q6ZS27 426 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 TSHZ1Q6ZSZ6 1077 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 PARP9Q8IXQ6 854 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 SUGCTQ9HAC7 445 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 IGKV6D-21A0A0A0MT36 114 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.89□□□□□ -0.83
USP6NL-203ENST00000443016 WDR64B1ANS9 1081 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 CHMP2AO43633 222 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 GAS7O60861 476 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 CD52P31358 61 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 ERVK-21P61565 698 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 MRPS5P82675 430 aaKnown RBP9.89□□□□□ -0.83
USP6NL-203ENST00000443016 MGAT3Q09327 533 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 BLIDQ8IZY5 108 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 NME8Q8N427 588 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 METTL13Q8N6R0 699 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 PKNOX2Q96KN3 472 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 C17orf80Q9BSJ5 609 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 GABBR1Q9UBS5 961 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 TRPV2Q9Y5S1 764 aa9.89□□□□□ -0.83
USP6NL-203ENST00000443016 SMIM35A0A1B0GVV1 85 aa9.88□□□□□ -0.83
USP6NL-203ENST00000443016 POU3F3P20264 500 aaPredicted RBP9.88□□□□□ -0.83
USP6NL-203ENST00000443016 IBSPP21815 317 aaPredicted RBP9.88□□□□□ -0.83
USP6NL-203ENST00000443016 AK2P54819 239 aa9.88□□□□□ -0.83
USP6NL-203ENST00000443016 HTRA4P83105 476 aaPredicted RBP9.88□□□□□ -0.83
USP6NL-203ENST00000443016 SCRN1Q12765 414 aa9.88□□□□□ -0.83
USP6NL-203ENST00000443016 NFX1Q12986 1120 aaKnown RBP9.88□□□□□ -0.83
USP6NL-203ENST00000443016 PAK2Q13177 524 aa9.88□□□□□ -0.83
USP6NL-203ENST00000443016 LRCH2Q5VUJ6 765 aa9.88□□□□□ -0.83
USP6NL-203ENST00000443016 GALNT17Q6IS24 598 aa9.88□□□□□ -0.83
USP6NL-203ENST00000443016 FBXO22Q8NEZ5 403 aa9.88□□□□□ -0.83
USP6NL-203ENST00000443016 AIFM3Q96NN9 605 aa9.88□□□□□ -0.83
USP6NL-203ENST00000443016 CELF4Q9BZC1 486 aaKnown RBP9.88□□□□□ -0.83
USP6NL-203ENST00000443016 DISC1Q9NRI5 854 aa9.88□□□□□ -0.83
USP6NL-203ENST00000443016 CEP131Q9UPN4 1083 aa9.88□□□□□ -0.83
USP6NL-203ENST00000443016 BRWD1Q9NSI6 2320 aa9.88□□□□□ -0.83
USP6NL-203ENST00000443016 K7ELQ4 463 aaPredicted RBP9.88□□□□□ -0.83
USP6NL-203ENST00000443016 MSH4O15457 936 aa9.88□□□□□ -0.83
USP6NL-203ENST00000443016 AAK1Q2M2I8 961 aa9.88□□□□□ -0.83
USP6NL-203ENST00000443016 ZNF484Q5JVG2 852 aa9.88□□□□□ -0.83
USP6NL-203ENST00000443016 ZSCAN31Q96LW9 406 aaPredicted RBP9.88□□□□□ -0.83
USP6NL-203ENST00000443016 ASB2Q96Q27 587 aa9.88□□□□□ -0.83
USP6NL-203ENST00000443016 TEKT3Q9BXF9 490 aa9.88□□□□□ -0.83
USP6NL-203ENST00000443016 FTHL17Q9BXU8 183 aa9.88□□□□□ -0.83
USP6NL-203ENST00000443016 AGO3Q9H9G7 860 aaKnown RBP9.88□□□□□ -0.83
USP6NL-203ENST00000443016 TPCN1Q9ULQ1 816 aa9.88□□□□□ -0.83
USP6NL-203ENST00000443016 KCNJ14Q9UNX9 436 aa9.88□□□□□ -0.83
USP6NL-203ENST00000443016 LIMCH1Q9UPQ0 1083 aa9.88□□□□□ -0.83
USP6NL-203ENST00000443016 MAFBQ9Y5Q3 323 aaPredicted RBP9.88□□□□□ -0.83
USP6NL-203ENST00000443016 CCDC194A0A1B0GVG4 234 aa9.87□□□□□ -0.83
USP6NL-203ENST00000443016 ENPP3O14638 875 aa9.87□□□□□ -0.83
USP6NL-203ENST00000443016 HSP90AA1P07900 732 aaKnown RBP9.87□□□□□ -0.83
USP6NL-203ENST00000443016 NONOQ15233 471 aaKnown RBP eCLIP9.87□□□□□ -0.83
USP6NL-203ENST00000443016 FIBCD1Q8N539 461 aa9.87□□□□□ -0.83
USP6NL-203ENST00000443016 LENG9Q96B70 501 aa9.87□□□□□ -0.83
USP6NL-203ENST00000443016 RIT2Q99578 217 aa9.87□□□□□ -0.83
USP6NL-203ENST00000443016 SH2B1Q9NRF2 756 aaPredicted RBP9.87□□□□□ -0.83
USP6NL-203ENST00000443016 PADI3Q9ULW8 664 aa9.87□□□□□ -0.83
USP6NL-203ENST00000443016 SQORQ9Y6N5 450 aa9.87□□□□□ -0.83
USP6NL-203ENST00000443016 COL1A2P08123 1366 aa9.87□□□□□ -0.83
USP6NL-203ENST00000443016 MICAL3Q7RTP6 2002 aa9.87□□□□□ -0.83
USP6NL-203ENST00000443016 LPXNO60711 386 aa9.87□□□□□ -0.83
USP6NL-203ENST00000443016 SFNP31947 248 aa9.87□□□□□ -0.83
USP6NL-203ENST00000443016 TFF2Q03403 129 aa9.87□□□□□ -0.83
USP6NL-203ENST00000443016 TMEM266Q2M3C6 531 aa9.87□□□□□ -0.83
USP6NL-203ENST00000443016 LETM2Q2VYF4 491 aa9.87□□□□□ -0.83
USP6NL-203ENST00000443016 EPC2Q52LR7 807 aa9.87□□□□□ -0.83
USP6NL-203ENST00000443016 KRT25Q7Z3Z0 450 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms